Pleurodeles waltl (Iberian ribbed newt): 138284059
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Entry
138284059 CDS
T10800
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
138284059 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138284059 (MYO5C)
04131 Membrane trafficking [BR:
pwl04131
]
138284059 (MYO5C)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138284059 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138284059 (MYO5C)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
138284059 (MYO5C)
mRNA cycle factors
P-body specific factors
138284059 (MYO5C)
Membrane trafficking [BR:
pwl04131
]
Others
Actin-binding proteins
Myosins
138284059 (MYO5C)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
138284059 (MYO5C)
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
138284059 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
138284059
NCBI-ProteinID:
XP_069078560
LinkDB
All DBs
Position
3_1:313889271..314606422
Genome browser
AA seq
1745 aa
AA seq
DB search
MALAELYTQYNKVWIPDPDEVWKSAEILKDYRIGANDLLLCLEDGTAIDYSVEDATRDLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAINPYKELPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYF
ATVSKSSSKANVEDKVLATNPITEAIGNAKTTRNDNSSRFGKYMEISFDKRYQIIGANMR
TYLLEKSRVVFQSENERNYHVFYQLCACASLQEFKNLHLVSANEFNYTKLGGNITIEGVD
DKADMKETQKTFKLLGLKEDFQMDVFKVLAAILHLGNVNIKKVGDDRSSVNRSDKHLKLF
CELLNLETDKVAQWLCNRKIVTTSETVIKPMTLLQAVNTRDALAKHIYAHLFDFIVGRIN
RALQFSGKQHTFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILQLLDEECLLPQGTDDNWLQKLYNNYIEKNPLFEK
PRMSNRAFIIQHFADKVEYKCDGFLEKNRDMLYEVLIDILKNSKFSLFANFFQDNSTTPS
PFGSSIKVKPARPAIKPANKQFRTTVGSKFRNSLSLLMETLNATTPHYVRCIKPNDEKLP
FEYDPKRVVQQLRACGVLETIRISAQSYPSRWTYLEFYGRYSILMTQQELSLNDKKQICK
NVLQRLIKDSNQYQFGRTKIFFRAGQVAFLEKLRSDKLRNACVTIQKNIRGWVQRKKFLR
AKRAVIVIQQYFRGQRTVRQAITATALKHAWAAITIQKYCRGFLIRRIYQLILVAAVTIQ
AYTRGYLARKRYRKMVEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLSYRVQRLQKKL
EEQGKENHGLLERLTTLASAHSKDVDKLHRLEAELKKTASQKNALEVKGKKDKEEAEQKV
GKLQKQTTELLEQKKQLESKLQDKTQEMKDKMDELTKQLFADVEKEERQRIILQKSFEIQ
KQEYETQVNLQKEEIRTLKRENVALQHQVQEELSLKEGLKLEVAQLTQQAKTIPEFAKEI
QRLQSEKEDTERLVQSQKREMRDKMSEFTQQLLGSFEVKDVKNRLSSENLEHLNEDGELW
FAYEGLKKATRVLESHFQAQKENYEKEIEVLHFKVEHLSQETSHLQKLFREKNDMNDSIR
LEVTRLASENMLIPDLKQQISELQRHKIDLETRLQDQALEMKDKMEGISNQLHQDLKEEG
IQRKTLEVQKEQFLREKEELARKIQHMEEKNNNLKTQQETENELKSKIRLEASRLTVENM
DFEEQIDMKDRLIKKLQDQIKALTKTIEKGNPAAVPTLPKEYMGMLEYSTEDEEKLTKNL
ILDLKPRGVVVNMIPGLPAHILFMCVRYADRLNEADRLKSLMNTTINGIKQVIKDNAEDF
EILSFWLSNTFHFLNCLKQYSGEEEFMKHNTPRQNMNCLKNFDLSEYRQILSDLAIRIYH
QFITVMENNIQPMIVPGILEYESLQGISVTKPTGFRKRSSSIDDTDAAYSITSILQQLSY
FYTTMCQHGMDAELLKQAVKQLFFLIGTVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWL
KEKNMQSSTAKETLEPLSQAAWLLQVKKITDEDAKEICDRCTALATVQIVKILNSYTPID
DFEKRVTPSFVRKVQSLLSSREDMPQLMLDSKYLFQVTFPFSPSPQALEMVQIPSSLKLG
FLTRL
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctatacacagtacaacaaggtttggatccctgatccagatgaa
gtttggaagtctgctgaaatcctaaaggactatagaattggagcaaacgatcttcttctt
tgcttggaagatggaacagcaattgattactcagttgaagacgcaacgcgagatctgcca
cccctgcgaaaccctgatatacttgtgggtgaaaatgaccttacagcactcagttacctt
catgaacctgctgttctacacaaccttaaagttcgctttgtggaatccaagcttatctac
acctacagtggaattattttggttgccattaatccctacaaagaattgccaatctatgga
gatgccattatccatgcatacagtggtcaaaatatgggtgatatggatccacatatattt
gctgtggcagaagaggcatacaagcaaatggcaagaaacaataaaaatcaatctatcatt
gttagcggagaatcaggtgcaggaaagacagtatctgccagatatgctatgagatatttt
gctacagtcagtaaatccagcagtaaagcaaatgtggaagacaaagtacttgcaacaaat
ccaataacagaggctattggtaatgccaaaaccacaaggaatgacaacagcagccgattt
ggaaaatatatggagatcagttttgacaagagataccaaattattggtgcgaacatgcga
acttacctgctcgagaaatccagagttgtttttcaatcagaaaatgagagaaactaccac
gtattctaccagctttgtgcgtgtgcatcgctgcaagaatttaagaatctacacctggtg
agtgcaaatgaatttaattataccaaactgggtggaaatataactattgaaggagttgac
gataaagcggatatgaaagaaactcagaagacattcaaattgctgggcctgaaggaggac
tttcaaatggatgtttttaaagtactggctgccattttgcatttgggcaatgttaacatc
aaaaaagttggagatgatcggtcttctgtcaatcggagtgacaagcatttaaagcttttt
tgtgaacttctgaatctggaaacagacaaagtggctcagtggctgtgcaatcgaaaaatc
gtaaccacgtcagagacggtgatcaaacccatgacactacttcaagcagtcaacaccaga
gatgctttggcaaagcatatttatgcccacctgtttgacttcatcgtggggagaataaac
agagccttacagttttcaggcaaacagcatacattcataggagtgttggacatttatggc
tttgaaacatttgaagtgaatagttttgagcagttttgcattaattatgcaaatgaaaaa
cttcaacagcaatttaacatgcacgtcttcaaacttgagcaagaagagtacatgaaagaa
gacattccttggactctaatagatttctatgataaccagcctgtcattgacctgattgaa
gctaaaatggggattctgcagctgcttgatgaagaatgcctgttaccgcaggggactgac
gataattggctccaaaagctttacaataattacattgagaagaatcccctatttgagaag
ccaagaatgtcgaacagagcgtttatcatccaacactttgctgataaggtggaatataaa
tgtgatggatttctggagaagaacagagatatgctctatgaagttttgattgacatcctt
aaaaacagtaagttcagtctgtttgccaactttttccaagacaactcgactactccttct
ccttttggctccagcattaaagtcaagccagcaaggcctgcgatcaagccagctaacaaa
cagtttcgaacaacagttggaagcaagttccgcaattctctgtctttactcatggagaca
cttaatgcaactactcctcactatgtccgatgtataaagccaaatgatgaaaagctacca
tttgaatacgacccaaaaagagtagtacagcaactgagagcatgtggtgttttggaaaca
attcgaatcagtgcccagagctacccctccaggtggacgtatctcgagttttatggccgt
tacagcattctcatgactcaacaagagctttcactgaatgacaagaaacagatttgtaag
aacgttttacagcgattaatcaaggatagcaaccagtatcagtttgggagaacaaaaatt
ttctttagagctggccaggtggccttcctagagaaactacggtcagataaattacggaat
gcatgtgttacaatccaaaagaacattcgagggtgggtacagaggaagaaatttcttcga
gctaagcgagctgttattgtaattcaacagtacttccgtggacagagaactgtacgccaa
gctataactgcaacagcgctaaaacatgcctgggcagcaataaccattcagaagtactgc
cgtggattcctaatccgacgcatttaccagctcatccttgtggctgctgtgacgattcaa
gcatacacacgaggttatttagcaagaaaaagatatcggaagatggtggaggaacataag
gctgtaatacttcaaaagtatgcccgtgcatggctggcaaggcgcaggttccagagtatt
cgacgctttgtgctgaacattcaactttcttatcgggttcagcgattgcagaagaaactg
gaagagcagggtaaagaaaaccatgggttattagagcggctcaccactcttgcgtcagca
cactccaaggatgtcgacaaactccacaggctggaagcagaacttaaaaaaacagcgtca
cagaaaaatgcactggaagttaaaggaaaaaaagacaaggaagaagccgaacagaaagta
ggaaaacttcaaaagcaaactacagaactgcttgaacagaaaaaacagctggaatcaaag
cttcaagataaaactcaggaaatgaaagataaaatggatgaacttacaaaacaactcttc
gctgatgtagaaaaagaggaaagacagagaataatactgcagaaaagttttgaaatccag
aagcaggagtacgagacgcaagtcaatcttcagaaggaagaaataagaactctaaaaagg
gagaatgttgctctccagcaccaagtgcaagaagagctatccctcaaagaaggtttaaaa
cttgaagttgcacaactgacacagcaagcaaagacaatccctgaatttgcaaaagaaatt
caacgccttcagtcggagaaagaggacacagaaagactggtccaatctcagaagcgtgaa
atgagagataagatgtcagaatttacacagcaacttcttggaagctttgaagttaaggat
gtaaaaaacagattatcttccgaaaatttggaacatctgaacgaagatggggaattatgg
tttgcttatgaaggcctcaagaaagccacaagagtgttagaaagtcatttccaggcacaa
aaagagaactatgaaaaagaaattgaagtcctgcattttaaagttgagcaccttagccaa
gagacgagccatctacagaagctgttcagagaaaaaaatgacatgaatgatagtattcgg
ctcgaggtcacgaggcttgcatcagaaaacatgttgattccagaccttaaacagcagatt
tctgaacttcagagacacaagattgatctggaaacccgtctccaagaccaggctctggaa
atgaaagataaaatggaaggcatttcaaatcagttgcatcaagatctgaaggaggaagga
atacaaaggaaaacactagaggtccagaaggagcagtttctaagagaaaaagaggaactt
gccagaaaaatacaacacatggaggaaaaaaacaacaatctaaaaacgcagcaagaaacg
gagaatgagttaaagagcaaaataagactggaggcatcccgtctaactgtggaaaacatg
gattttgaagaacagatagatatgaaagacagacttataaagaaactccaagatcaaata
aaggcgttaacaaagaccattgaaaaaggcaatccagctgcagttccaactttaccaaaa
gaatacatgggaatgcttgaatattcaaccgaagatgaagaaaaactcacaaaaaatctc
atacttgatttaaaaccaagaggcgttgtagtgaacatgatccctggcttgccagctcac
atattgttcatgtgtgtgagatatgcagatcgtctgaatgaggctgacaggctgaaatcc
ttaatgaatacaaccatcaatggcataaaacaagttattaaggacaacgctgaagacttc
gaaatactctccttctggctttcaaatacctttcattttctgaactgtttgaagcagtac
agcggggaagaggaattcatgaagcacaatacgccacgtcagaatatgaattgcttgaag
aacttcgatctttctgaatacaggcagatcctcagtgatctggctatccgaatctatcat
cagttcatcactgtcatggagaacaacattcagcccatgatagtacccgggatacttgaa
tatgaaagtcttcagggaatttctgtaacaaagccgactggattccgcaagcgctcctcc
agcattgatgacacagatgctgcttatagcataacctccatccttcagcagctcagctat
ttttacaccactatgtgccagcatggcatggacgctgagctgctcaaacaggcagtcaag
cagcttttcttcctgattgggactgtaaccctcaacagcctctttctgcgtaaggacatg
tgctcttgtaggaaaggaatgcagataagatgcaatataagttacttggaggagtggctg
aaggaaaagaatatgcaaagcagtaccgccaaagagaccctggagcccctttcccaagcc
gcatggctgcttcaggtcaagaagatcacagatgaagatgccaaagaaatatgtgatcgc
tgcactgctcttgccactgtgcagattgtaaagatcctcaattcatatactccaatagat
gattttgagaaacgcgtgacaccttcatttgtgcggaaggttcagtctcttttaagcagc
cgggaggacatgcctcagctgatgttggacagcaaatatctctttcaagtgacatttcca
ttcagcccatctccacaagctttagaaatggtgcagatcccgagcagcctgaaactcggc
ttccttacaagactgtaa
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integrated database retrieval system
