Pleurodeles waltl (Iberian ribbed newt): 138284075
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Entry
138284075 CDS
T10800
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
138284075
NCBI-ProteinID:
XP_069078588
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Position
3_1:344065133..344163096
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AA seq
1089 aa
AA seq
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MPPATRLPLHCACVTLLILSQALAVSFPEDDEPINIVDYHYSRQYPVFRGRPSGNESQHS
LDFQLMLKIRDTLYIAGRDQVYTVNLNEVPKAEMTPSKKLTWRSGQTDRRNCGMKGKHKD
ECHNYIKVFVPRNDEMVFVCGTNAFNPVCRFYKLNSLEYDGEEISGLARCPFDARQTNVA
LFADGKLYSATMADFQASDAVIYRSMGDGFALRTIKYDSKWLKEPHFLHAIEYGNYVYFF
FREIAVEHNSLGKAVHSRVARICKNDMGGSQRVLEKHWTSFVKARLNCSVPGDSFFYFDV
LQSITDIIEINGIHTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTA
VPEDKVPKPRPGCCARHGLAEAYKTSTDFPDETLSFIKSHPLMDSAIPSVIEEPWFTKTR
VRYRLTAIAIDHSAGPFLNYTVIFVGSEAGVVLKILAKTSPLSLNDSILLEEIEAYNHAK
CATDSEEDKRVLSLQLDREHHALFVAFSSCVIRVPLSRCERYGSCKKSCIASRDPYCAWI
NHSSCGKVKLGMFTAYEQDVEFGNTAHLGDCHDLLPTTTTPDYKIFGDPTSDQELPSSSV
TAVTSAPVISPNVIGSWEPKETGSRKFVVQDDPETSDYIDPISGVPKGVRWEVQSGDSNH
MVHMNVLITCVLAAFVLGSFIAGVAVYCYREIFIRKPRKMHKDAESAQSCTDSSGSFAKL
NGLFDSPVKEYQHNIDSPKLYTNLLASRKELPPSGDTKSTILMETQSQPPELAALPTPES
TPVLHQKGLQPIKNQWEKAQNNINTSRKEPALKSPQFFPSSPPPHSPPSHGYIPSAVVLP
NATHDYNTSFSNSNAHKTDKKIQNIDHQLTKSSSKRDHRRSVDSRNTLNDFLKHLNETAS
NPKAVLGDIQLTHQVGHQPPHPTLMLDTMGNLSEIPPKVPNREASLYSPTSLPRNSPTKR
VDVPTTPTGPMASLERQRSHPKMSSQRHSISALPKNMNSPNGVLLSRQPSVSRGSYMPPA
PGTRMDYMQGTTVTVHAPPSLSRQSSYTSHGTLPRTGVKRTPSIKPDVPPKPSFGPQTTP
VRQMNKYSY
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggccacgcgactccccctgcattgtgcctgcgtgacgctattaatcctctca
caggccctggcagtcagctttcccgaggatgacgagcccattaatatcgtcgactaccac
tattccaggcaatatccagtatttagaggacgcccttcaggcaatgaatctcagcatagc
ctggactttcagctgatgttgaaaattcgagacacactttatatcgctggcagagatcaa
gtttacacagtcaatttaaatgaagttccgaaggcggaaatgaccccaagcaagaagtta
acatggagatcaggacagacggacaggaggaactgtggcatgaaaggcaaacacaaagat
gaatgtcacaactacataaaagtctttgttccaagaaatgatgagatggtatttgtctgt
gggacgaacgcctttaatcccgtatgccgattctataaattgaatagcttggaatatgat
ggtgaagaaatcagtggtttggctcggtgcccttttgatgctagacaaaccaatgttgct
ctttttgctgatgggaagctgtattcagcaaccatggctgacttccaggccagtgatgcc
gtcatctatcgaagcatgggcgatggatttgctttaaggaccatcaagtatgactccaag
tggctcaaagagccgcactttctccatgccatcgagtacggaaactatgtttatttcttc
tttcgggaaattgctgtggagcacaacagcctgggcaaggccgtgcactcgcgtgtggca
cgtatatgcaaaaatgacatgggcggatcgcagcgtgtgttggaaaagcactggacctcg
tttgtgaaggcgcggctcaactgttccgtgccaggagattccttcttctactttgatgtg
cttcagtcaataactgacatcattgaaatcaatgggatccacacagtggtgggcgtcttc
accacacagctgaacagcattcctggatcagcggtgtgtgcattcagcatggatgacatt
gaaaaagtattcaaagggagatttaaggaacaaaagaccccggactctgtttggacagct
gtaccagaagacaaagtacctaagcctaggccgggttgctgtgccaggcatggcttagca
gaggcttacaaaacgtctactgatttcccggacgaaaccctgtcctttatcaaatcccat
cctttgatggattctgccattccatcggtcatcgaagagccctggttcacgaagacacga
gtcaggtacaggctgactgctattgctatcgaccactcagctgggcccttcctcaactac
accgtcatctttgttggctcagaagccggagtggtacttaaaatcttggcaaagacaagt
cccctctctctgaatgacagcatattactggaagagattgaggcttacaatcatgcaaag
tgtgctaccgacagtgaagaggacaaaagggtcctttctcttcagttggacagagagcac
catgcattgtttgtggcattctccagttgtgttattagagtgcccctcagtcgctgcgag
cgctatggatcgtgcaaaaaatcttgtattgcttcacgggatccctactgtgcctggatt
aaccacagctcatgtggcaaggtgaagctgggcatgttcacggcctatgagcaagacgtg
gaattcggtaatacagcacatcttggagactgccatgaccttttgcctactacaactaca
ccagattacaaaatatttggcgacccaacatctgaccaggaattgccctcatcttctgta
actgcagtgacaagcgccccagtaatatcacccaatgtgattggttcctgggaacctaaa
gagactggctctcggaagtttgtagtccaagatgacccagagacttccgattatattgat
ccaatatcaggtgtcccaaagggtgtaagatgggaagttcagtcgggagactccaaccat
atggtacatatgaacgtcttgatcacctgtgtcctggcagctttcgttctgggatcgttt
attgctggggttgcagtctattgctacagagagatcttcataaggaaacccagaaagatg
cacaaggatgcagagtctgctcagtcttgcaccgattcaagtggaagttttgcaaagtta
aatggtttgttcgacagtccagtcaaggaatatcagcacaatattgattcacctaagctc
tatacaaatctactggcaagtagaaaggagttgccaccaagtggagataccaagtccacc
atcttaatggagacccagtcccagccccctgaacttgcagctcttccaactccagagtcc
accccagtgcttcaccagaagggtctgcaaccaattaaaaaccaatgggaaaaggcacaa
aataacataaacacttcacgtaaagagccagcgttaaaaagtcctcaatttttcccttcc
agccctccaccacattcacctccgagtcatggatatattcctagtgctgtggttcttcca
aatgcaacacatgactacaatacttcattctcaaattccaatgcccacaaaacagacaag
aaaatccaaaacattgatcaccaattgacaaagtcttcaagcaaaagagaccacaggcga
tctgttgattccagaaataccctgaatgatttcctgaaacatttaaatgaaacagccagt
aatcccaaagctgtactgggagatatacagttaacgcaccaagtgggtcaccaacctcca
caccccactttgatgttagataccatgggaaatttgtcggaaattccacccaaggttcca
aaccgagaagcatccctctactcccctacttctcttcctagaaacagtccaacaaaaaga
gtggatgttccaacaactccaacgggaccaatggcatcactagagcgacaaaggagccat
cctaaaatgtcatcacaaaggcattcaatatctgcacttcctaaaaacatgaactcacca
aatggtgttttgttgtccagacagcctagtgttagcagaggcagttacatgccccctgct
cctggcacaagaatggactacatgcaaggaacaacagtgactgttcatgcacctccttcg
ttgtcccgacagagcagctatacaagccatggaactcttcctcgtacaggagtaaagagg
acaccatccataaaaccagatgtcccaccaaaaccctcgtttggtcctcaaactacacct
gtcagacaaatgaacaagtacagctactaa
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