Pleurodeles waltl (Iberian ribbed newt): 138284129
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Entry
138284129 CDS
T10800
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138284129 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwl03009
]
138284129 (EFL1)
Ribosome biogenesis [BR:
pwl03009
]
Eukaryotic type
Pre-60S particles
GTPases
138284129 (EFL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
MMR_HSR1
Phlebo_G2_C
SERF-like_N
Motif
Other DBs
NCBI-GeneID:
138284129
NCBI-ProteinID:
XP_069078675
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Position
3_1:384063078..384833630
Genome browser
AA seq
1162 aa
AA seq
DB search
MCLPTSTCSTSSRLRLARKCTMGITNLEKIIALQKNTVNIRNICILAHVDHGKTTLADCL
IASNGIISTRLAGRLRYLDSREDEQIRGITMKSSAISLHFNKGDEEYLINLIDSPGHVDF
SSEVSTAVRLCDGSVIVVDAVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLTS
QEAYCHLQKILEKVNAITGTLFTSKVLEERAERETETLVIKDTDGEQIYDWSAGLEETDD
SLLYFSPELGNVVFSSAIDGWGFSIDRFAELYSEKVGIKASVLLKTLWGDYYLNAKAKRI
MKGAQLKGKKPLFVQLVLDNIWSLYDAVMNRENEKIEKMVSLLGLKIGARESRHADPKVH
LRAICSQWLPVSQAVLSMVCNKLPSPLDIAAERVERLMCVGSRRFDSLPPETQELKIAFL
NCKSEDTAPVIIFVSKMFPVDAKALPKNKQRPLTQEAIAQRRELARQRHAEKMASSQGQQ
QQLTSHTLPGIEPEVTSDVSNQKGDEQPVTSQMESLTLKSEKQEADNKESFIAFARVFSG
VVRRGQRIFVLGPKYDPTVTLPKLPSEYPTAEDLPPVPHMACCTLENLYLLMGRELEDLE
EVPSGNVLGIAGLEDYVLKSATLSTSLACPPFIPLNFEATPIVRVAVEPKHASEMPQLVK
GMKLLNQADPCVEVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIQLSASEPIIPFRET
IIRPPKVDMVNEDIGRQQKVAVIHQVKEDQNRTPEGVQIDVDGLVTMTTPNKIASLSVRA
MPLPEAVTQLLEENSDLIRVMEQFNLALNEGSNTHEIGQFTLDRIKEFKQKLEQNLQGRR
WRNAVDQIWSFGPRRNGPNILLNRLEGYERPSVWQCLDKARKEGAKCRDLDNSIASGFQL
VTLAGPLCEEPLMGVCFIVEKWDMSKVQTLIITGRQDSVCFESDGTENKKEVNATANTSI
SESSADVNSLIYLNEDSAKSFEKTKRKGEIMPTDCYGPFSGQLIATMKEACRYAFQAKPQ
RLMAAMYTCEIMATAEVLGRVYAVLSRREGRVLLEEMKEGTDMFIIKAVLPVAESFGFAD
EIRKRTSGLASPQLIFSHWEVISSDPFWVPTTEEEYLHFGEKADSENQTRKYMNSVRKRK
GLAVEEKTVEHAEKQRTLGKNK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttacctacttccacgtgtagcacttcatcccgtttacgtttggccagaaaatgc
acaatgggtatcaccaatctggaaaaaattattgccttacagaaaaatacagtcaacatc
cgaaatatctgtatattagcacatgtggaccatggaaaaaccactttggctgactgtctc
atagctagcaatgggattatctccacacgactagcaggaaggttgaggtacctggacagc
agagaagatgaacaaatcagaggaattactatgaaatccagtgccatttcattgcatttt
aataaaggtgatgaagagtacctcattaatctgattgactcccctggccatgtggatttc
tcctccgaagtatcaactgctgttcgtctttgcgatgggtctgtaatagtagtggatgca
gttgaaggagtctgtcctcagacacaagcagtcctgcgacaagcatggctagaaaacatc
cgtccggtgttggtgataaataaaattgatcgtttgatagtggaactcaagcttacttct
caagaagcttattgtcatctgcagaagatcttagaaaaggtcaatgcaatcactggaact
ctctttacatctaaagtcttagaagagagagctgagcgagagacagaaacactggttata
aaagatactgatggagaacaaatctacgactggagtgcaggcttggaagagactgatgat
tccctcctttacttctcaccagagctaggaaatgtggtgttttctagtgcaattgatgga
tggggctttagcattgaccggtttgctgagctttatagcgaaaaggttggcatcaaggct
tcagtgcttttgaagacattgtggggagattactatctgaatgcaaaagctaagaggatc
atgaaaggtgcccagttgaaaggaaagaaacctctctttgtgcagctggtactagacaac
atttggagtttatacgatgcagtgatgaatagggagaatgagaaaattgaaaaaatggtc
agtttactgggattaaaaatcggtgcccgggagtctcgccatgcagatcccaaagtccat
cttcgtgctatctgcagtcagtggttacccgtctcccaggcggtgctgtcaatggtgtgt
aacaaactcccaagtccactggatattgctgcagagcgagtggaaagattgatgtgtgtg
ggatcaagaagatttgattccctcccacctgaaacacaagaactcaaaattgcttttctg
aattgcaagagtgaagatacagctcctgtcatcatctttgtttccaaaatgtttcctgtt
gatgccaaggcgttgcctaaaaacaagcaaaggcctttaacccaggaagcaattgctcaa
aggcgggagcttgccaggcagagacatgcagaaaagatggcttcgagtcagggacaacag
cagcaactgacaagtcatactcttcctggaattgaaccggaagtgacttcagatgttagt
aaccagaaaggagatgaacagcccgtcacgtctcagatggagagcttgaccctaaaatct
gagaagcaggaagctgacaacaaggagtctttcattgcatttgctagagtattcagcggt
gtagtgcgaagagggcagagaatctttgttctgggaccaaaatatgatcctactgtaaca
ctgccaaagttgccctctgagtacccaactgcagaagatctcccgcctgtgcctcatatg
gcttgctgcactcttgagaatctctatctactgatgggccgagaactggaggaccttgaa
gaagtgccatcaggcaatgtgctgggtattgcaggcttggaagattatgtcttgaagtca
gcaacattgtcaacctccctagcctgtccaccttttataccacttaactttgaagcgacg
cccattgtgcgggttgctgttgaaccaaagcatgcaagtgaaatgcctcaattggtgaaa
ggaatgaaacttctaaatcaagctgatccatgtgtagaggtattaatccaggagacaggg
gagcatgttcttgtcactgcaggagaagttcatttgcaacgctgtttggatgacttgcga
gaaaggtttgcaaagattcagctgagtgcatcagagccaattattcctttcagggagaca
attatacgtcccccgaaagttgacatggtgaatgaagatattggtaggcagcaaaaggtt
gctgtcatacatcaagtaaaagaagatcagaatagaactccagaaggtgttcagattgat
gtggatgggcttgtaactatgaccactccaaataaaattgccagccttagtgttcgagct
atgcctcttcctgaggctgtaacacaacttcttgaagagaacagtgatttgatccgtgtt
atggagcagttcaacttggctttaaatgaaggtagtaacacccatgaaattggccagttc
actttggatagaattaaagaatttaagcagaaactggaacaaaacctacaaggaagaagg
tggagaaatgcagttgatcagatttggtcatttggtcctcgtcggaatggaccaaatatt
ttgttgaacagactggaagggtatgaaagaccttctgtgtggcaatgccttgataaggct
aggaaggaaggcgctaaatgtcgggatttagataacagcattgcaagtgggtttcagctt
gtgacgttggcaggacccttgtgtgaagaacctctaatgggtgtatgctttatagtggaa
aagtgggacatgagcaaggtacaaacactaataatcactggccggcaggattcagtgtgt
tttgaatcggatgggacagaaaacaaaaaggaagtaaacgcaacagctaatacttctatc
agtgaatcatctgctgatgtcaatagcctgatttatcttaatgaagacagtgcaaagtca
tttgagaagacaaaacgcaaaggtgaaattatgcctacagactgttatggccctttttct
ggccaactgattgccacaatgaaggaagcttgccggtatgccttccaagccaagcctcag
cgactgatggcggccatgtacacatgtgaaattatggctacagcagaagtattaggccgt
gtttatgcagtgctgtcaagaagagaaggacgagttttacttgaggagatgaaagaagga
acagatatgttcattattaaggcagtgcttcctgtagccgagagttttggttttgctgat
gaaatccggaaacggacaagtggccttgccagcccacaactgatatttagccactgggag
gtaatttccagtgatccattttgggtaccaacgactgaagaggagtatttacattttgga
gaaaaggcagactccgagaaccagacacgcaagtacatgaattcagtgagaaaacgaaaa
ggactggctgtggaagagaaaactgtcgagcatgcagagaagcagagaactctcggcaaa
aataagtga
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