Pleurodeles waltl (Iberian ribbed newt): 138284219
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Entry
138284219 CDS
T10800
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138284219 (CHD2)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138284219
NCBI-ProteinID:
XP_069078852
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Position
3_1:482440077..483959512
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AA seq
1862 aa
AA seq
DB search
MDPKMMRDDDKPEEGSVRSNASSNSASEESNHSASPSDSGSQSESEHGSGHGSDHASEHG
SEHASEHGSEHASGHGSQHASGHGSDSNSSSASGSQSESENESTGSKSRKNSTESKEKNV
PKKQRLADVKKMWEEYPDVYGVRRSNRSRQEPSRFSIKSETSESESISPRRRGQSQRKIQ
DRGKKNLVSSEDEDDEEASSGESEVEQPTVRSRRLLPRRAAAKATLKKQQKVQQGKRKKQ
ESSEEEEDEDDAPKRQTRRQSGKAVSYKEDDDFETDSDDLIEMGGDVVEEEPDNSETIER
VFDSRIGKKGATGASTTEYAVEENGDPNSDYNPEKDAGEPHYLIKWKGWSYIHSTWESEE
SLQEQKVKGLKKLENFKKKEDEIRQWLSKVTPEDVEYYNCQQELSAELNKQYHIVERVIA
VKTSKFTSGHCDFPVHNRKGVTSSSNEPEYLCKWMGLPYAECSWEEGALIGKKFQACIDN
FISRDASKTIPTRECKVLRQRPRFVTLKKQPSYIGNENLELRDYQLDGLNWLAHSWCKNN
SVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTITSWQREFEIWAPELNVVT
YIGDLMSRNSIREYEWINPQTKRIKFNALITTYEILLKDKNVLGIINWAFLGVDEAHRLK
NDDSLLYKTLIEFKSNHRLLITGTPLQNSLKELWSLLHFLMPEKFDSWEDFEDDHGKGKE
NGYQTLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALSKG
TRGSTSGFLNIVMELKKCCNHCFLTKAPEDAEKEKETRLESLQSLIKSSGKLILLDKLLT
RLHERGNRVLIFSQMVRMLDILADYLSIRRYPFQRLDGSIKGEIRKQALDHFNAEGSEDF
CFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTV
EEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGSSNSNPFNKDELTAILKFGAADLFK
EPEGEESEPQELDIDEILRLAETRENEPSSSATDELLSQFKVANFATMEDEPELEDSPSK
EWDDIIPEDQRKKLEDEERQKELEEIYMLPRIRSLNKKAQANDSESDTESKQKAPHSSGS
ESYSDDSDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFIKAYKKFGSPLERLECIARDAE
LVDKSVADLKRLGELLHSSCTSAMQEFEEQLKESTIEGKVPGKKRGPTIKISGVQVNVKA
IIQHEEEFALLNKSIPVDPEERRKYRLLSRVKPAHFDVDWGVEDDSHLLLGILEHGYGNW
EQIKTDPELNMADKILPMELDKKPQGKHLQSRVDYLLKLLKKELERKEAGLGEEVKIKKR
KPRVKSEKISKVKEEQGNELSSPRPSENQSEDGDVKEDDLDKNTVKKKPQKKDNKENKEK
KTPVKKDAKKDVNKEKKSKEKKEKVKREAKPGSKAKKSQGPVHITAGNDPIPIGEEEEDE
LDQETFSTCKEKMRPVKRALKQLDKPDKGMTVHDQLEHTRTCLLKIGDRISECLKAYSDQ
EHVKIWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQEEEDQKPKKKDDTSSGKCIFKS
EASGSSRDNLPSQPHGLHTPQKFHPPGPHLPLPREHQRENFSHQNKRPFSNQERGDWPRD
RKFDYVGSSNQPWGERHPYEQNRFKDRHYEDRRPHGDPRRNSENYRQNNTSRKRPYEQYN
NERDHRGHREYYDRHDAKRRRSEEFRTQNYHQQDFRRMPDHRPPVGYHGQGPADQYRSFQ
CDQQGTEYKSPPRPHVSAVSDPRSPPPQKSPHESKPPLDHKTPLDKSLEQKNTDLNWNVR
KT
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaagatgatgcgagacgatgacaaacccgaagagggctcggtccgtagcaat
gcttcaagtaattcagcatctgaagaatccaaccattctgcatctccatcggactccggt
agtcaatctgaaagtgaacatgggagtgggcacggcagtgaccatgccagcgaacatggt
agtgaacatgccagtgagcatggaagtgaacatgccagtgggcacggaagtcaacatgcc
agtgggcacggaagtgactctaacagcagctcagcctctggaagtcagtctgaatctgaa
aacgagtcaacaggttctaaatccagaaagaattccacagaaagcaaagagaaaaatgtt
cccaagaagcagaggttggcagacgtgaagaagatgtgggaagaataccctgatgtttat
ggggttaggaggtcaaaccgaagccgccaagaaccgtcgcgatttagtattaaaagtgag
actagcgaatcggaaagcataagccccagacgaagaggccagagtcagaggaaaatacag
gatagaggtaagaaaaatctggtgtcgtctgaagacgaagatgatgaggaagctagcagt
ggtgagagtgaagttgagcaaccaacagttcgctcgaggcgattgctaccaagaagagca
gctgccaaggccactctcaaaaagcaacaaaaagtccaacagggaaaacgaaagaagcaa
gaatcatcggaggaggaggaggatgaggatgatgctcccaaaagacaaactcgacgacaa
tctggcaaagctgtgagttataaagaagacgatgactttgaaaccgactccgatgacctg
attgaaatgggtggagacgtggttgaggaggagcctgacaacagtgaaaccattgagcga
gtttttgattccagaattggaaagaagggagccactggagcttccacaacggagtatgct
gtagaagagaatggtgatccgaattccgactataacccagagaaagatgctggagagcct
cactacctcatcaaatggaaaggctggtcttacatccatagtacatgggaaagtgaggag
tctcttcaggagcagaaagtcaagggtctgaaaaaactggagaactttaagaaaaaggag
gatgaaatacgtcagtggctatcaaaggtaactccagaagatgtggagtattacaattgc
cagcaagagctatctgcagagttaaacaaacagtatcatattgtagaaagagtaatagct
gtaaagacgagcaagttcacatcggggcactgtgactttccagttcacaatcgaaaaggt
gtcacttcgtcttccaatgagccagaatatctatgcaagtggatgggattgccatatgcg
gagtgcagttgggaagaaggagctctgatcggcaagaagttccaagcatgtattgacaat
ttcataagccgggatgcctccaaaacaatccctaccagagaatgcaaggtcctgaggcag
cggccaaggtttgttacattaaagaaacaaccttcttacattggaaatgagaacctggag
ctcagggattaccagctggatggcctcaactggctcgcccactcatggtgcaagaacaac
agtgtgatccttgctgatgagatggggttgggaaaaaccatacagaccatatcattcctc
tcctaccttttccaccagcatcagctgtatggcccttttctgttagtcgtcccattgtct
actattacttcctggcagcgagaatttgagatctgggcaccagaactgaatgtagtgact
tatataggagacctcatgagccgaaactcgatacgggagtacgagtggataaacccacaa
accaaaaggattaagttcaatgcacttatcacaacctatgagatcttactaaaagataag
aatgtcctcggtattattaattgggcttttcttggagtggatgaagcacatcgtctgaaa
aatgatgactcgctgttgtacaaaacgttaatcgagtttaagtctaatcacagactgctg
attacgggtaccccccttcagaattccttgaaagaactctggtcactgttgcattttcta
atgccagaaaagtttgactcttgggaagactttgaggatgatcatggtaaggggaaggag
aatggttatcagactctacacaaagtactggagcctttccttttgcgtagagtgaagaaa
gatgtagagaaatccctgccagctaaagtggagcaaattctcagggtagaaatgtctgct
ctacagaagcagtattacaaatggatcttaacaaggaattacaaagctctttcgaaaggg
acaaggggaagcacgtctggtttccttaatattgtgatggagttgaaaaaatgctgtaac
cactgcttcctgacaaaagctcctgaagatgctgaaaaagagaaggaaactaggttggaa
tctctacagtccctcatcaagagcagtggtaagctgattctgttggacaagctacttaca
aggctacacgagagaggaaaccgtgttttaatcttctcccagatggtacgcatgttggac
atccttgctgactacctgtctatcagacgctacccatttcagcgcttggatggttcgata
aaaggagaaatccgaaaacaggcacttgatcatttcaatgctgaaggctcagaggacttt
tgttttctgttgtcaacaagagcaggcggtctagggattaacctggcatctgctgatact
gtggtcattttcgactctgattggaacccccaaaacgatttgcaggcacaggcgcgagca
caccgaattggacagaaaaagcaggtaaacatataccgcttagttacaaaaggaactgtt
gaagaggaaataattgaacgtgccaagaagaagatggttctggaccatcttgttatccag
cgtatggatactacaggcaggactgtactcgataacaattcaggcagttccaactcaaat
ccattcaataaggatgaactgactgcaattttgaagtttggtgctgcagatcttttcaaa
gagcctgaaggagaggaatctgagcctcaggaattggacattgatgagattcttcgtctt
gccgaaacaagagaaaatgaaccctcttcaagtgcaacggatgagctgttatcgcagttc
aaggtggcaaattttgctacaatggaagatgagccagaactggaagatagtcccagtaag
gagtgggatgatataattcctgaggatcagcggaagaaactagaagatgaagaacgtcaa
aaagaattagaggaaatctacatgcttcctcgaatcagaagtttaaataagaaggcgcag
gcaaatgatagtgaatctgatactgaatcaaagcaaaaagcaccgcattcttctggttca
gagagctactctgatgactcggatgatgaaaaaagaccaaagcgcagaggacgtcctcga
agtgtacggaaagatactgtggagggatttacagatgcagaaatcagaaggtttatcaag
gcttataagaagtttggctctcccttagaacgactggagtgcattgctagggatgcagag
ctagtagataaatctgtagccgatctgaagcgattgggggaactgctacattccagctgc
acttcagcgatgcaagaatttgaggaacagctgaaagagagcacaatagagggtaaagtg
cctggaaagaaacgtggccctaccataaagatttctggagtccaggtcaatgtaaaagcc
attattcaacatgaagaagagtttgcattgctaaacaaatccattcctgtggacccagaa
gaaagaagaaagtatcgcttgttaagtcgtgtcaaaccagctcatttcgatgtagactgg
ggagtggaagatgattcacatttgctgttgggaatacttgaacatggttatgggaactgg
gagcaaattaaaaccgatcctgaacttaacatggctgacaagatcctacctatggaacta
gacaaaaaaccccaaggaaaacacttgcagtccagagtcgattacctgcttaaactgttg
aagaaggagctagagaggaaggaggctggtcttggtgaggaggtcaaaataaaaaagaga
aaacccagggtcaaaagtgagaaaatctccaaagtgaaagaggaacaaggaaatgaattg
tcttcacctcgtccttcagaaaatcagtcagaggatggagatgtgaaggaagatgatttg
gacaagaacacagttaagaaaaagccgcaaaagaaagataacaaagagaataaggaaaag
aaaacacctgtgaagaaggatgctaagaaggatgttaataaagagaaaaagtcaaaggag
aagaaggagaaggtcaaacgagaggcaaagcctggaagtaaagcaaagaaatctcagggc
cctgtccatattactgcaggaaatgacccgattccgataggagaggaggaggaagatgaa
cttgaccaggagacattcagcacctgcaaagagaaaatgagaccagttaaaagagcactg
aaacagctggataagccagacaaaggaatgacagtacatgatcagctggagcacacacgt
acttgcttgttaaaaatcggagaccgcatttcggaatgtcttaaagcctattctgatcaa
gagcatgttaaaatatggagaagaaacttgtggatctttgtttccaagtttactgaattt
gatgccagaaagttgcacaaactctacaaaatggcccataagaaacgatcccaagaagaa
gaggatcaaaagccaaagaagaaggacgatacctcaagtggtaaatgtatatttaaatca
gaagcttcaggatccagtcgtgataatttgccttctcagcctcatggacttcatacacct
caaaagtttcacccacctggaccacaccttccactgcctcgtgagcatcagcgagaaaac
ttcagccaccaaaacaagaggccattttctaatcaagaacgaggtgattggccgagagat
cggaagtttgactatgtaggcagcagcaatcagccttggggagaaagacacccgtatgag
cagaaccgctttaaagaccgccactatgaagaccgtcgcccccatggggatccccggcga
aattctgaaaattacagacaaaataatacttcccggaaaagaccatatgaacaatacaac
aatgaaagagaccataggggacacagagaatactatgacaggcatgatgcaaaacggaga
agatctgaagaatttcggacccagaattaccatcagcaggactttaggcgaatgccagat
cataggcctccagttggctaccatggccaaggacctgctgaccagtatcgatcttttcaa
tgtgaccaacaaggaacagaatataaatcaccacccagaccccatgtttctgcagtctca
gaccctcgttcccctccacctcaaaaatccccacatgaatcaaagccaccacttgatcac
aagactccacttgacaagtccttggagcagaagaatacagatttaaactggaatgttcgt
aaaacatga
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