Pleurodeles waltl (Iberian ribbed newt): 138284266
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Entry
138284266 CDS
T10800
Symbol
IGDCC4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138284266 (IGDCC4)
Cell adhesion molecules [BR:
pwl04515
]
Immunoglobulin superfamily
DCC/UNC5 family
138284266 (IGDCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
ig
Ig_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Adeno_E3_CR2
DUF4998
Motif
Other DBs
NCBI-GeneID:
138284266
NCBI-ProteinID:
XP_069078941
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All DBs
Position
3_1:complement(533262867..533731297)
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AA seq
1303 aa
AA seq
DB search
MEGHWLMCFCLSCACWLLTGSSEPVSVGCGVGPVHVILEPGRPLVLDCQLGPADQPANIS
WWKDGQQIPEQTYVQTLANGSLSISQAPFDPGQVELSDDSEGSYSCVRQSAVGTVISRGV
VVRLSSLSRFHQHPESQTVWEHGLAHFECSVEGLPVPMITWEKDQKSLPPDTRFIFFPSG
ILQIVDVQVWDAGSYRCLASNVARKLYSNEATLNVLEASSRPDGDSVAITAAPRNTTVIA
GQSAVMECQAAANPPPMVSWIRQDGRPIAPDVIVLGEANLLIAHAQPHHSGVYVCRANRP
HTRHFVNASAELRVLAPPVITHHPENVSRPPASTARFVCNAEGEPTPSIFWLKNGSPVLP
NGRVKTPSTGSLVITQIGLEDAGYYQCIADNSLGTACATTQLSVIVREGLPSAPKGVTAV
PLSSTIIVVSWERPEYNSEQIIGFSLHYQKAVGTDNIEYQYAVNNDTLEFHVKDLQPSTS
YVFYVVAYSQLGASRSSSPITVQTWDDVPEAAPQHSLSSNTPTDIHVSWLPLQPEVSNGK
VIKYQIDYCTVKEVDKVYSVEVSGNETEVTLDSLHPNRAYKVRIAAGTIAGYGAPSEWMQ
HRTPEKFNKTHVPFAPTELKVRSRLDSLLLSWLPPSNYAQISGYKLFYRAVSTDESSSEH
PLKGDEESWDAGPIKLKKKLKQYQILQLVPDTMYEVKLVAYNKHEDGYAALWKGKTDKVS
ALGTDPQVSKGPPLPPSYLEVQPRSSTSVWLKWRKPDFNSVKIANYTVRCNLWGQQNASL
VTYHTSSAEGILISGLKPYTKYEFAVQSNGLDVDGPFSSVVEQVTLPDRPSSPPSELQVN
PISSYAVRVVWRPPMEPNGVIMEYIILYVANSTQPDHMWMQLTKEGNISSTEILGLESGT
RYFFKMGAKTSAGTGPFSVVKDVQTLPAKAAEVLDIHSVTGIIVGVCLGLLCILFCMCAS
FRNSKHRESTVGLEPQVSGTPSYCHRGRQSVGTQGPSSNSHELESLMPPRVEEVCPTPTE
ITELSDGHPLTSIGHPEDGVLVKLKPTWNGSINPNWVNNITIYGDAKSPGSTSNGLLLPH
TDIGKKHAMSAVISPSDIAQNEIQKAVNHQPAICNRVEAEVIVHSDFSASERSCECEQSR
SESEDVISEVEDVRAFSPLEENLPQPATSSPPDREDIGHHYERPEEAHQVQEELFHVEKD
TEKLEVTLAPRLANGFHRDCESISPLCNRETDFLKDSREISRLEMSCLDGSRVMLQAETN
YIQDRGSSEADKQPLLCPGLQDTSLCNTSFSSNSTSASEQACS
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggagggccattggctcatgtgcttttgccttagctgcgcttgctggctcctgacagga
tcctcggagcctgtgagcgtgggctgcggtgtgggccctgtgcacgtgatcctggagccc
ggacgcccgctagtgctggactgccaactggggcctgcggatcagcctgccaatatcagc
tggtggaaggatgggcagcagatcccagagcagacatatgtgcagactttagccaatggg
tccctctccatctcccaggcaccctttgaccctggacaagtggagctgagcgacgacagt
gaggggagctactcctgcgttcgacagagcgctgttggcacagtgatcagccgtggtgtc
gtcgttagactatcaagtttgtcacgctttcaccagcacccagagtctcagacggtttgg
gagcatggcttggcacacttcgagtgcagtgttgaaggtctgccagtgcccatgatcact
tgggagaaggatcagaagagcctgccccctgacaccagattcatcttttttccaagtggc
atccttcagattgtggatgtgcaggtgtgggatgctgggagttatcgttgcttggcatca
aacgttgcacgtaaactctacagcaatgaagctacactcaatgtgctggaagctagttcc
cggcctgacggtgacagtgtggccatcacggcagccccaaggaacaccacagtgatcgcc
gggcagagcgcagtcatggagtgtcaagcagctgccaacccacctcccatggtttcctgg
ataaggcaggatggaaggcctatcgcaccggatgtgatagttcttggtgaagccaacctc
ctcatcgcgcacgcacagccacatcactctggggtctatgtctgccgtgctaaccggcca
cacaccaggcactttgtcaatgcatcagcagagctgcgggtgcttgctcctccagttatc
acccaccatcccgagaatgtgtcccgccctccagccagcacggccaggtttgtctgcaac
gcagaaggagagccaaccccgtccattttctggctgaagaatggctcaccagtcctgcct
aatgggcgggtgaaaacccccagcaccggcagcctggtcatcacccagattggactggag
gatgcgggatactaccagtgcattgcagacaacagccttgggacagcatgcgccaccact
cagctatccgtcattgtccgtgaaggtttacccagtgccccaaagggtgtcactgcagtg
cctctgtcaagcaccattatagttgtgtcatgggagaggccagagtacaacagtgagcag
atcatcgggttctctcttcattaccagaaagctgttggcacggataacatagagtaccag
tatgctgtgaacaacgataccctggagtttcacgtcaaagacctgcagcctagcaccagc
tatgtcttctatgtcgttgcctactctcagctgggggccagccgctcctcctcgcccatc
actgtgcagacctgggatgatgttccagaagctgccccccagcactccttgtccagcaac
actcccactgatatccatgtgagctggctccctcttcaaccagaagtgagcaacgggaaa
gtcataaaatatcaaattgactattgcactgtgaaggaagtggataaggtgtactctgtg
gaggttagtgggaatgaaactgaggtgaccctggactctctgcatccaaaccgggcttac
aaagttcggatcgcagctggcacaatcgctggatatggcgctccctcggagtggatgcag
caccgcacccctgaaaagttcaataagacacatgttccatttgctcccacagagttgaag
gttcggtctaggcttgattccctgttattaagctggctgcctccatctaattatgctcag
atctcagggtacaagctcttctaccgggctgtgagcacagatgagtccagtagtgaacat
cccttgaagggcgacgaggaaagctgggatgcagggccaatcaaactcaagaagaaactg
aaacaataccagattcttcagctggtgcctgacacaatgtacgaggtgaagttagtggcc
tataacaagcatgaggatggatatgcagctttgtggaagggaaagactgacaaggtgtcc
gctcttggaacagacccacaggtttcaaaaggtcccccgctgcctccttcatatttagaa
gtccaacccagaagttccacatcagtttggctaaaatggaggaaaccggactttaacagc
gtcaagattgctaactacactgtgcgctgcaacctgtgggggcaacagaatgcctctctg
gtcacatatcacactagctcggcagaaggtatcctgatcagcggattgaagccatacaca
aagtacgagtttgctgtgcagtcaaatgggcttgacgttgatgggcccttcagcagcgtt
gtggagcaggtcacccttccagataggccatcgtctcctccctcggaactccaggtaaac
ccaatcagctcatatgctgttagggtggtgtggcgcccccctatggagcctaacggtgtc
atcatggagtacattatcctgtatgtagcaaacagcacccagcccgaccacatgtggatg
cagttgaccaaagaaggaaatatttcgagcacagagatcctgggcctagagagtggaact
aggtacttcttcaagatgggagcaaagacgagtgccggaactgggccattctctgttgtg
aaagatgtccaaactttgcccgcaaaggctgcagaagtcctcgacattcattcagtgact
ggcatcattgtgggagtctgcctcgggctgctgtgcatcctcttttgcatgtgcgccagc
ttccgcaacagcaagcacagagagagcacagtgggcttggaaccccaggtatctggaacc
ccatcctactgccacaggggaaggcagagtgtggggactcagggccccagttcaaattca
catgagctggaatctctcatgcctcctcgggttgaggaagtgtgcccgacaccaacagag
attacagagctgtctgatgggcacccactgaccagcattggccatccagaagatggtgtg
cttgttaagctaaagcccacatggaatgggtcgataaacccaaactgggtgaacaacatt
accatttatggagacgcaaagagcccgggaagcacctctaatgggcttcttctaccgcat
accgacattgggaagaaacatgccatgtcagcggtgatttcgccctcggatattgctcag
aatgaaattcagaaagctgtcaaccatcaaccggccatttgcaatcgtgtggaagctgag
gttattgtccattctgacttttctgcctctgaaaggagttgtgagtgtgagcagagcagg
tcggagagtgaagacgtcattagtgaggtagaggatgtgcgcgcattcagtccgttagaa
gagaatctgcctcagcctgccacctcctctcctccagacagagaggacattgggcaccac
tatgaaagaccagaagaagcccaccaagtgcaagaagaactcttccatgtagagaaagat
acagaaaaattggaagtcaccttagcgcctaggcttgccaacggtttccacagggattgt
gagagcatcagccctctgtgcaacagagaaacagacttcctcaaggacagcagagagatc
tcgcggctggaaatgagttgcctcgatggaagtcgagtaatgttgcaggcagaaacgaac
tacatacaagatagaggaagctcagaggcagacaaacagcctcttctttgtccaggtctg
caagatacctcactgtgcaatacctccttttcaagcaattcaacctcagcatctgagcag
gcatgttcctaa
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