Pleurodeles waltl (Iberian ribbed newt): 138284375
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Entry
138284375 CDS
T10800
Name
(RefSeq) interferon regulatory factor 3-like
KO
K09447
interferon regulatory factor 7
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04620
Toll-like receptor signaling pathway
pwl04621
NOD-like receptor signaling pathway
pwl04622
RIG-I-like receptor signaling pathway
pwl04623
Cytosolic DNA-sensing pathway
pwl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138284375
04621 NOD-like receptor signaling pathway
138284375
04622 RIG-I-like receptor signaling pathway
138284375
04623 Cytosolic DNA-sensing pathway
138284375
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138284375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138284375
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
138284375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
138284375
NCBI-ProteinID:
XP_069079183
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All DBs
Position
3_1:complement(612712722..612768593)
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AA seq
677 aa
AA seq
DB search
MAACDRAHPKELFGPWLIRQINNNSYGLSWQNPEKTIFCIPWKHLARKDITGQDYELFKA
WAIHGGKYSERPEDRSTWKTNFRCALNSVSVKEKKISCKTQDGATMKDKKLFTEVEDRSS
DPHNPHKVYRLIHAPDGSNYASATSSANHSGLPDCEEEEETLRISPDFLEIPNFKTPRPQ
PDEAPIEDILEFLSLDPNAVNVVLGQSVITNGHREENGYHPEEAEPAIYSVPLSQQNGYH
CLQQSTLQWCQAEEAAPVTNCLAYQQETWTPLAASCSQENKAVFINQTIIQNGHGEGVPV
SNGDNYITVNSAAKNSFQSWAPQWTIEPAVPGYSPIQNGFASPTAAFRQNKSPQHQLTLF
PIGKQHQDAATDPAYSNHGAQNGYFQEAPSGNGAKYSRNSSPVENSYHSVGSRWPNPAVP
EHQPTENGYGYQQGNAEQEQHPSLAVQAQIHNLSLNCPRSSSLDVTIFYKGNEVLHQQVT
KRCLLTFNPQDSSLGEVEAVHFPRPDNIRDQKQLEYTQRLLDSVQRGLLLEVNPEEKILI
ATRLGKCKVFWAFSEELGNMAERVESRMLQREIPERIFDFNTFWTELREYRQQTRRASPD
YSIYLCFGQWLTEKPKEKKLILVKIVPRFCSFFHELIQGEGASSLNSETISLQISNGSSI
NCYDLLESSLMDIDLPY
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtgtgacagagctcaccccaaggaactctttggcccttggctgattaggcag
atcaacaacaacagctatggactgtcctggcagaacccagagaagaccatcttctgcatc
ccttggaagcatctcgccaggaaggatattacgggtcaggactatgagcttttcaaggct
tgggcaatacatggcggcaaatacagtgagcggcctgaagaccgttccacctggaaaacc
aactttcgctgtgccttgaacagtgtcagtgtgaaggaaaagaaaatatcctgtaagacc
caggatggcgctactatgaaggacaagaaattgttcaccgaggttgaagaccgatctagc
gatccccataatccacataaggtgtacagacttatccacgccccggatggttccaactat
gcatcggctacttcttctgcaaatcacagtggcctccctgactgtgaggaagaggaggaa
accctgcgcatcagcccagactttttggagatcccaaactttaaaacgcctcgtcctcaa
cctgatgaggcacctatagaagatatcttggagttcctgtctctggaccccaatgcagtg
aacgtggtcttaggacaaagtgtgatcacaaatggacacagggaggagaacggataccat
ccggaagaggccgaacctgcgatatacagtgtccctttatcacagcaaaatggttaccac
tgtttgcagcagagtacactccagtggtgtcaagcagaagaagccgctcccgtgaccaat
tgtcttgcataccagcaggagacgtggactccactggcagcttcctgttctcaagaaaat
aaagctgttttcattaaccaaaccatcatccagaatggacatggagaaggggtgccagtg
agcaatggggacaactacatcacagtaaacagtgctgcaaagaacagctttcagtcttgg
gctccacagtggaccatcgagccagcagtgccagggtatagccccatccagaatggattt
gcctctccaacagcagcatttcgacagaacaagtctccacagcaccagttgacactgttc
cccatcggaaagcagcaccaagatgcagcaactgatcctgcttacagcaatcacggcgcc
caaaatgggtattttcaagaagcgccttcgggcaacggtgccaaatatagcaggaacagc
agccctgtggagaacagctaccactcagtggggtcgcggtggcctaacccggccgtacca
gagcaccagcccactgagaatgggtacggctatcagcaagggaatgccgaacaggaacaa
catccatctcttgctgtgcaggcccaaatacataatttaagtttaaattgcccacggagt
tccagtttggatgtgaccatcttttacaaagggaatgaggttcttcaccaacaggtgacc
aaaagatgcctcctcactttcaaccctcaagattcctcacttggtgaggtggaagctgtt
catttcccaaggccagataacatccgtgatcagaaacagttggagtacacccagaggctg
ctggacagtgtgcagcggggcttgcttcttgaggtaaacccagaggagaaaatactcatc
gccacacgactgggcaagtgcaaggtgttctgggcattctccgaagagcttggaaacatg
gcagagagagtggagtccagaatgcttcaaagggaaattccagaaaggatttttgatttt
aacacattttggacagagttgagagaataccgtcaacagacacgtcgtgcatcaccggac
tacagcatctacctctgctttgggcaatggctgacagagaagcccaaggagaagaagctg
attctggtaaagatcgtgcccagattttgcagtttttttcatgaactgatccagggggaa
ggagcctcctccttgaatagtgaaacaataagcctgcaaatttccaatggcagctccatc
aactgctacgatctgcttgaatcttccttaatggacatagatctgccatactga
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