Pleurodeles waltl (Iberian ribbed newt): 138284460
Help
Entry
138284460 CDS
T10800
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03030
DNA replication
pwl03410
Base excision repair
pwl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138284460 (FEN1)
03410 Base excision repair
138284460 (FEN1)
03450 Non-homologous end-joining
138284460 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwl03032
]
138284460 (FEN1)
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138284460 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwl04147
]
138284460 (FEN1)
DNA replication proteins [BR:
pwl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
138284460 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
138284460 (FEN1)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
138284460 (FEN1)
Exosome [BR:
pwl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138284460 (FEN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
UQCC2_CBP6
HHH_2
DJC28_CD
Motif
Other DBs
NCBI-GeneID:
138284460
NCBI-ProteinID:
XP_069079336
LinkDB
All DBs
Position
3_1:complement(669604042..669616056)
Genome browser
AA seq
442 aa
AA seq
DB search
MFSRGIGCYPIGSVKLTDELHSYRISYGRWTRVWNNRRSLNVPVKEHQPEIILCLDSLLT
RMGIHGLAKLIADVAPGAIKENDFKSYFGRKVAIDASMSIYQFLIAVRQDGNVLQNEDGE
TTSHLMGMFYRTIRMVDSGIKPVYVFDGKPPEMKSGELVKRSEKRAEAEKQLEAAVEAGE
VENIEKFNKRLVKVTKQHNDECKKLLTLMGIPYVEAPCEAEATCAALVKAGKVYAAATED
MDALTFGTPVLLRHLTASEAKKLPIQEFHLNRIHQDMELTHEQFVDLCILLGSDYCETIR
GVGPKRAIDLIKQYKSIEEILENIDTKKYPVPENWLHKEARRLFLEPEVVDASSTELKWT
EPDEEKLVEYMCGEKHFNEDRIRNGAKKLAKNRQGTTQGRLDDFFKVTGSISSTKRKVPE
PKGSAKKKAKSATTPGKFKKGK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgcggcattggctgttatccgatcggaagtgttaaacttacggatgaacta
cattcgtacaggatcagctacggtcggtggacacgtgtgtggaataacaggcggtctctg
aacgtaccagtgaaagaacaccagcctgaaatcattctttgtcttgactccttactgacg
aggatgggaattcatggcctggccaagctgattgcggatgtggctcctggggccataaag
gagaatgacttcaagagttactttggtaggaaggtggccattgatgcctcaatgagcatt
taccagtttctaatcgccgtgcgccaggatggcaatgtgttgcagaatgaagacggtgaa
accaccagtcatctgatgggcatgttctaccgtacaatccgcatggttgacagtggcatc
aaacctgtctatgtctttgatggtaagccccctgaaatgaaatccggtgagctagttaag
cgcagtgagaagcgggctgaggcagagaagcagctagaggctgcggtggaggcgggtgag
gttgagaacattgagaagttcaataaaaggctggtgaaggttacaaagcagcacaatgac
gagtgcaagaaactgctaactttgatgggaatcccctacgtagaggccccttgtgaggca
gaggctacttgtgcagccttggttaaggcaggcaaagtttatgcagctgcaacggaggac
atggacgccctcacctttgggacgccagtcctgctgaggcatctgacagccagtgaggca
aagaagctacctatccaagagttccacctaaaccgcatccaccaggacatggagctgaca
catgagcaatttgtggacctgtgcattcttctgggcagtgattactgtgagaccatccgg
ggtgtggggcctaaacgggcaattgacttaatcaagcagtacaagagcattgaagagatc
ttggagaacattgacacaaagaagtaccctgtccctgaaaactggctgcacaaggaggca
cgtcgcctcttcttagagccagaggtggtagatgcaagcagcactgagctcaagtggaca
gagcctgatgaggagaagctggtggagtatatgtgtggtgagaagcacttcaacgaagat
cgaattcgcaatggggcaaagaaactagccaagaaccgacagggtaccacacagggacga
ctggatgacttcttcaaggttaccgggtctattagctccaccaagaggaaagtgccagag
cccaaaggctctgcaaagaagaaagcaaagtctgccactactccagggaaattcaagaaa
ggaaaataa
DBGET
integrated database retrieval system
