Pleurodeles waltl (Iberian ribbed newt): 138284565
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Entry
138284565 CDS
T10800
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138284565 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pwl03310
]
138284565 (RORA)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138284565 (RORA)
Nuclear receptors [BR:
pwl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138284565 (RORA)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
138284565
NCBI-ProteinID:
XP_069079569
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Position
3_1:complement(717944389..718169913)
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AA seq
516 aa
AA seq
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MRLTVAAAAADEAAEEAQEQRSAAAALLYPAAVPATLCGSPGLAPAATRMYFVITAMKAQ
IEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQH
CRLQKCLSVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYN
ISPSGLTELHDDLSSYIEGHTPDGGKTDSAVSSFYLDIQPSPDQSGLDINGIKPEPMCDY
SPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQITWQTFLQEE
IENYQSKHREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIR
MCRAFDSQNNTVYFDGKYACPDVFKSLGCEDFITFVYEFGKSLCSMHLTEDEIALFSAFV
LMSADRSWLQEKIKIEKLQQKIQQALQHVLQKNHREAGILTKLICKVSTLRALSGRHTEK
LMAFKAIYPDIVRLHFPPLYKELFTSEFEAAMQMDG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgacagtggcagcagcagcagctgatgaggcagcggaggaggcacaggagcag
aggagtgctgcggccgcacttctttacccagcagctgttcccgcgactctatgcggctct
cccggccttgcacccgccgcgacgaggatgtattttgtgatcacagcgatgaaagctcaa
attgaaattattccatgcaagatctgcggagacaaatcatcaggaatccattacggcgtt
attacatgtgaaggctgcaagggctttttccggaggagtcaacagagtaacgccacatac
tcgtgtcctcgccagaagaattgtttgattgaccgaacgagtcgaaatcgctgccagcac
tgccgcttacagaaatgtctttctgtgggaatgtcgcgtgatgctgttaaatttggccgt
atgtcaaagaaacagagggatagtttgtatgctgaagtacagaaacacaggatgcagcag
caacagcgagatcaccaacagcagcccggagaagcagagccactcactccaacctacaac
atctcgcccagtggtctgacagagctccacgacgacctcagtagttacatcgaggggcac
acgcctgatgggggcaagacagactctgccgtgagcagtttctacttggacatacagcca
tctcctgatcagtcaggactggacatcaatggcatcaaaccagaacccatgtgcgactac
tcgccagcatcgggcttcttcccatactgctcttttacaaacggagagacttcgccaacg
gtatctatggcagaactagaacatcttgctcagaatatttctaagtcccacatggaaacg
tgtcagtacctgagagaagagctgcaacaaataacatggcagacatttttgcaagaagaa
atagaaaactatcaaagcaagcaccgagaggtgatgtggcagttgtgtgcggtgaaaata
acagaagccattcaatatgtggtggagtttgccaagcgcattgatgggttcatggagctt
tgccaaaatgatcagattgtgcttctgaaagctggttctttagaagtcgtgtttatcaga
atgtgtcgtgcctttgactctcagaacaacacagtatactttgatggaaaatatgcttgc
ccagacgttttcaaatcattaggttgtgaagacttcattacttttgtttatgaatttggg
aaaagcctgtgttctatgcacctgacagaagatgagatagcgttgttttctgcgtttgtc
ttaatgtcagcagatcgttcatggcttcaagagaaaataaaaattgagaagctccagcag
aagatacaacaggcccttcagcatgtccttcagaagaaccaccgggaagctgggatccta
acaaaattaatatgcaaagtgtcaacgttgcgagcactatccggacgacacacagaaaag
ctgatggcatttaaagcaatatacccagacattgtgcggcttcacttccctccattgtac
aaagagttgttcacttcagagtttgaagccgccatgcaaatggatgggtaa
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