Pleurodeles waltl (Iberian ribbed newt): 138284616
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Entry
138284616 CDS
T10800
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138284616 (CTR9)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
138284616 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_6
TPR_11
TPR_7
ARM_TT21_5th
ANAPC3
TPR_9
TPR_Slam
ARM_TT21_4th
TPR_EMC2
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
138284616
NCBI-ProteinID:
XP_069079714
LinkDB
All DBs
Position
3_1:complement(783708819..783957750)
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AA seq
1160 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDIKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVRLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASASFVLPFFGLGQMYIYRGDRENA
SQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDTAKSHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQNALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHVAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLEECKQILLKARHVAPSDTVLMFNVALVLQRLATSVLKNEKSNLKEVL
NAVKELELAHRSFNYLSKVGDKMRFDLALAGTEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQEKELLRQRLQREQEEKRSKEQEEQKKLLEQRAQYMEKTKNLLSFTAGEMDGPK
EKKKGGGGGRRSKKAGDFEEFVNDDSDEDLPIKKKRKKKGSGSEQEGGEENGEKKKKKRR
RKPQKGDIGSDDGDEDAAGKPKKRQPRERKRKEKKEKPKPERMPPSMKGKIKSKAIISSS
EDSSDEDKLKIADDGNAKNSNSDSDDAPQKKKKRIMSDSGSDDNRNMSGSEAGTPRRSIV
RQSDEDSDNDQWARRRQRSDSEQSDNGSARSGGSGSPPPSPSASERASSKGSDKGSDNEG
SGGGSGNESEQQADPGSDSD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctccatagagatccccctgcgggatactgacgaggtcattgaacttgac
tttgaccagttaccagaaggagatgaagttataagtatcctgaaacaagaacatacacaa
cttcacatatggattgctttggcgctcgaatattacaagcaaggaaaaacagaagatttt
gtgaagctcttggaagctgcccgaatagatggcaatttggactacagagaccacgagaaa
gatcaaatgacttgcctcgatactttggctgcctactatgtgcagcaggcacgtaaggaa
aagaacaaagatatcaagaaagaactcatcacacaagcaacgctactgtacactatggca
gacaaaattatcatgtatgaccagaaccaccttttaggaagagcctgcttttgtctgcta
gaaggtgacaaaatggatcaggctgatgcacagttccacttcgttttaaaccagtctcca
aataacatcccagcactacttggtaaagcatgcatatcctttaacaaaaaggactaccgt
ggggccttggcttactacaagaaagcactgcgcactaacccagggtgcccagctgaagtc
cggttgggaatgggccactgctttgtaagactgaataaactggaaaaggctcgcctggca
ttcggaagggctcttgaacttaattccaagtgtgtgggtgccttggttggattagctgtc
ctggaactcaacaacaaagaggctgattcaatcaagaatggtgtacagcttctttctaga
gcctacacaattgatccgagtaacccaatggtactaaatcacctggctaaccattttttc
ttcaaaaaggattacagcaaagtacagcatttggcacttcatgctttccataacacggag
gttgaggccatgcaagcagagagttgctatcagctggccagatcttttcatgtacaggag
gattatgaccaggctttccagtactactatcaagctacacaatttgcttctgcttctttt
gtgctgccgttttttggcttgggccagatgtacatctacagaggagacagagagaatgca
tcacagtgtttcgaaaaggttttgaaagcgtaccctaataattatgaaactatgaaaatt
cttggatctctttatgctgcttctgatgatcaagaaaaaagggacactgcaaagagccat
ttaaagaaagtaacagagcaatatccagatgatgtggaggcatggattgaattggcacaa
attctggagcagacagacatccagaatgccctctcggcctatggtactgctacacgtatc
ctccaggaaaaagtgcaggctgatgtccctccagagattctgaacaacgtgggtgctctc
cattttcgcctcggaaatctgggggaagcaaagaaatatttcttggcatccctggatcgt
gcaaaagctgaggcagaacatgacgaacactactacaatgctatttctgtcaccacgtct
tacaaccttgcaaggctttatgaggcaatgtgtgaattccatgaagcagaaaaactttat
aagaacattttaagagaacatcccaattatgtggattgctatttacgcttgggtgcaatg
gccagagataaaggaaatttttatgaagcttctgactggtttaaagaagctcttcagatc
aatcaggaccatccagatgcctggtcattgattggcaaccttcatgtggcaaaacaagaa
tggggtccaggtcagaagaaatttgagcgaatattgaagcagccatctacacagaatgac
acatattccatgctggccctcggcaacgtatggttacagactttgcaccagcccaccaga
gacagagaaaaggaaaaacggcatcaggatcgcgcgctggcaatctataaacaagtcttg
cgaaatgatgccaagaacctatatgctgcaaatggcataggagctgtattagcacataaa
ggctatgttcgtgaagctcgagatgtttttgcccaagtgagagaggcaacagcagatatc
agcgacgtttggctaaacttggcacatatttatgttgaacagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaaattttacaaacatcaaaacacagaggtactt
ctgtacttggcccgagcacttttcaaatgtggcaagttagaagaatgcaagcagattttg
cttaaggctcgacatgtggcacctagtgatacggttcttatgtttaatgtagcgctggtg
ctacagcggcttgccacgtctgtactgaagaatgagaagagtaacttgaaagaagtatta
aatgcagtaaaggaactggaactcgctcatagatccttcaattacctgagtaaagtagga
gacaaaatgaggtttgatttggctcttgctggaacggaggccagacagtgctctgatttg
ctgagtcaggctcagtaccatgtggcccgtgcgcgcaaacaggatgaggaagaaaaagag
ctccgtgccaaacaagagcaagagaaagaattgttgcgtcaaagactgcagagggagcag
gaggaaaaacgcagcaaagaacaagaagagcaaaagaagcttttggaacaaagagctcag
tacatggagaaaaccaaaaacctcttgtcgtttactgctggagaaatggatggtccaaag
gaaaagaagaaaggaggtggtggcggaaggcggtctaagaaagctggagacttcgaggag
tttgttaacgatgactctgatgaagacttgccaatcaaaaagaagaggaagaagaaaggt
agtgggagtgaacaggaaggaggagaagagaatggagaaaagaaaaagaagaagaggagg
agaaagccacagaagggagatattggatctgatgatggtgatgaagacgctgctgggaaa
cctaagaaacgtcaaccaagagagcgtaaaaggaaagagaaaaaagagaagcccaaacct
gagcggatgccaccttcaatgaaaggaaagatcaaatcaaaggctatcatttcttccagt
gaagattcatcggatgaggataagctcaagatagcggacgatggaaatgctaagaacagc
aacagcgattcagacgatgcaccgcagaagaagaagaagcgtatcatgtcagatagtggc
tctgatgacaatagaaacatgtccggcagcgaagctgggactccccgaaggtccatcgtc
cgccagtccgatgaagattctgacaacgatcagtgggctagaaggcgacaacgctccgat
tcggaacaatcagacaatggctcagctcggtcaggaggcagtggctctcctccaccttcc
ccaagtgcatctgaaagagcgtcatcaaagggatcagacaagggatccgataatgaaggc
tctggtggtggttcagggaatgaatctgagcaacaggcggatccagggtcagatagtgac
tag
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integrated database retrieval system
