Pleurodeles waltl (Iberian ribbed newt): 138284681
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Entry
138284681 CDS
T10800
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022
Basal transcription factors
pwl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138284681 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
138284681 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138284681 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138284681 (GTF2H1)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138284681 (GTF2H1)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138284681 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
138284681
NCBI-ProteinID:
XP_069079853
LinkDB
All DBs
Position
3_1:837972311..838317590
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERVAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDSTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLKE
DPVLFQLYKDLVVSQVISAEEFWANRLTLNSLDNSAATCNKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKLKYAENVPHNLTEKEFWTRFFQSHYFHRDRLNMGSK
DLFAECAKLDDKGLKTMVSQGVKNPLLDLTSLEDKSLDEGYGVSSVPSTSNTKSLKENSN
AAIIKRFNHHSAMVLAAGLRREDAQNDQCSETSSTDGNSKDSDFFQPPVKKVKLQESIEY
EDLGQKNNTKTIALNLKKSDRYFHGPTPIQSQRYATSQDMINSFSSVKQEMEDYLPKLTQ
VLSSGAASSTISALSPGGALMQGATQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVIKMKTNLERFQITKLCPFQEKIRRQYLSTNLTSHLEEMLQTAYNKFQLWQ
SKRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatccgaagaagtgttactaattgtaaagaaggttcgtcagaaaaaacag
gacggagctctttacctcatggcagaaagagtggcctgggcgcctgaggggaaagatagg
ttcactgttagtcatatgtatgcggacattaaatgtcagaaaataagcccggaaggcaaa
gctaagatccaacttcagcttgtcctgcatgcaggagattctacaaacttccatttttct
aatgagagtactgcagtgaaggaaagggatgcagtaaaggatcttctccagcagctgctt
cctaaattcaagagaaaggctaacaaagagcttgaagaaaagaacaggatgctcaaagaa
gatccagttttgttccagctttataaagatctcgttgtcagtcaggtgatcagtgcagag
gaattctgggcgaatcgtttaaccttaaactccctggataactctgctgccacttgcaat
aagcaagatgtcggcatatcagccgcgtttctggctgatgtgcgtcctcaaactgatggc
tgtaatggtcttagatataatttgacatcggatataattgaatcaatcttcagaacttat
ccagcagtgaaactgaaatatgcagaaaatgtaccacacaacttgacagagaaagagttt
tggacacgattcttccaatcccattattttcacagggatcgattaaacatgggttcaaaa
gatctttttgctgagtgtgccaaattagatgacaaaggtttgaagaccatggtatcacaa
ggtgtgaaaaatcctttgctagatttaacttctttagaggacaagtccttggacgagggt
tatggcgtttcctctgtaccatctacatcaaatacaaaatcgttaaaggagaacagcaat
gctgccataattaaacgctttaatcatcacagtgccatggttctcgctgctggtcttaga
agagaggatgcccaaaacgatcaatgcagtgagaccagcagtacagatggcaactctaag
gattcagacttctttcaaccaccggtaaagaaggtgaagttgcaagaatccatagagtat
gaagatcttgggcagaaaaataacacaaagacaattgcactgaatttaaaaaagtcagac
aggtatttccatggaccaacaccaattcagtctcagaggtatgcaaccagtcaggatatg
attaattcttttagtagtgttaaacaagaaatggaagactatttgcctaaattaactcag
gttctctcaagtggtgctgctagcagtactatatcagccctgtcacctggaggagcctta
atgcagggtgcaacacaacaagccataaaccagatggtgccaaatgacattcagtctgaa
ctgaaacatctgtatgtagcagtgggagagttgcttcggcacttctggtcctgctttcca
gttaatactccattcctagaagaaaaggttattaaaatgaagaccaacttggaaagattt
caaattaccaaactttgcccattccaagagaaaatacgaaggcagtatttaagcacaaat
ttgacgagtcatttagaagaaatgctgcagacagcctacaacaaattccagttgtggcaa
tctaaacgtatgctgaaaaaaacgtga
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