Pleurodeles waltl (Iberian ribbed newt): 138284683
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Entry
138284683 CDS
T10800
Symbol
HPS5
Name
(RefSeq) BLOC-2 complex member HPS5
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138284683 (HPS5)
Membrane trafficking [BR:
pwl04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
138284683 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
WD40_WDHD1_1st
PEP5_VPS11_N
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Acetyltransf_7
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_2nd
Beta-prop_THOC3
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
138284683
NCBI-ProteinID:
XP_069079854
LinkDB
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Position
3_1:838569102..838991611
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AA seq
1118 aa
AA seq
DB search
MTSVPYIPEAFSHVLAEFESLDPLLSALRLDSQRLKCTCIAVSRKWLALGSSGGGLNLIQ
KEGWKQRLILAHKEGAISRVACCLHDEEFVAVATSQGYVVVWELNQERRGKPERIYVSSE
HRGKNITALLWDTTALRVFVGDLVGKVSAIKISSAKQGKAAATFMSFPVQIIATFDSSVV
QLDHMDGRLLISTLTRSYLCDTEREKFWKIGNKERDGEYGSCFFPVTKSSGCQQPLIYCA
RPGSRMWEVNFEGEVVSTHQFKQLLSSPPLPVINVRSHPQYVATSSSPQSLAFPKLLYVN
DYCVMAWTEQGIYVFVPQSVQVLLWSAVKDIQDICVIKNELFCLHTDGKVSHFSLLQVER
CIDRLLKRGFWTIAATVCCLFQNSIVSCRGRKMLSIERLEHLKTQLDPSAQSDVIGQLEV
MITKLEPFDSACSSRRSSISSHESFNVLDSGIYRVISRRCSQSDEDSGSVHSQNMSDEER
LKEVSSHHEEEQAEMDNISQASVMVDSDRSETLLPFSIPLSFRSPSPRVSLQAVKDSVSS
FVRKTTEKIGTFHASPEIHSRSDVKDEDQKIEVAVTVVEDPEETEYEADSQAEIPEVDLL
QELETINANTIARLQDPVALFEPETARKILEEWIPHLEKMNCFQETLHPSRSSPKFNIDL
RRPHLASGDQGMTLSDNEQKECSDVVHPEEEEQVLQNDLFPPKKAPQHCFHVRPPCSLPA
HILKDLVVLTTLCLELKVFGGVKEWSCENVDQDLLASSYLTCQFMKNYFFLLDLTRVKHY
VLFNYSSDPNVWETYIQGLKELTQSSPVTLAMGNEGLTEILKLVNEVEPWDSPLLLAHAT
RLYERFGEEAIRPFIRFYPTISPSEIVQLCRSHPDHFLTYLHSLVKSKPEDQRSSFIISL
LQPESLKLEWLLLAIRHDAPQMNNSIDAAGNPRPRSHLFTWGYEDLIMLLIRFPADFTTK
EKMSDICKTHGFWTGALYLCSEMDRRAEAFTIIIYLDDVSLLDRNKGLTPETLDEWKFIL
SRMQTCRSNHLHQGIPQGNTVSNGSCDWPNSFTVENVALLLAKVIGPDNAMPLLQECGFT
EELSERLINVFEILRVAEKRQRAMIQCMLEKCERFLWS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagttccgtatatcccggaagccttcagccatgtcttggcagaatttgaatct
cttgatcctttactttctgcgctccggttggactcccaacgactgaagtgtacttgtata
gcagtgtctcggaaatggctggctctgggaagttcaggtggcggtctaaacctcattcag
aaagaaggctggaagcagaggctgatacttgctcataaggagggtgccatttcacgtgtt
gcctgctgcctccatgatgaagaatttgttgctgtggctacaagtcaggggtacgttgtg
gtctgggaattgaatcaagagcgacgagggaagccagagagaatttatgtatcttccgaa
cacagaggcaaaaatatcacagctcttttatgggataccacagctcttcgagtatttgtt
ggagaccttgttgggaaagtttctgccatcaagatttcatcagccaagcaagggaaggct
gctgcaacctttatgtcgttcccagttcagataatcgccacatttgactcctctgtggtt
caactggatcacatggatgggagactgctcatatctactctcacacgttcctacttatgt
gatacagagagagaaaagttctggaaaattggtaataaagaaagagacggcgaatatggg
tcctgttttttcccagttacaaagagctctggttgtcagcagccattgatatattgtgct
cgtcctgggtccaggatgtgggaagttaattttgagggtgaagtggttagtacgcatcag
ttcaaacagctgttgtcttctccacctcttcctgttattaacgtaagatcacatcctcaa
tatgtagccacctccagttccccacagtctctggcatttcctaaacttctatatgtaaat
gactactgtgtgatggcctggacagaacaaggaatctatgtttttgttcctcaaagtgtt
caggtgctactgtggagtgcagtaaaagatatccaggatatttgtgtcattaaaaacgag
ctcttctgccttcataccgatggaaaggtctctcatttttcactcctgcaagtggagcgc
tgtattgaccgtttgctaaagcggggcttctggactattgctgctacagtctgctgcctg
ttccaaaattcaattgtttcttgcagaggaagaaaaatgttgtcaatagaaagattggaa
cacctgaaaactcagctggatccatccgcccagtctgatgtcataggccaacttgaggtg
atgattacaaagcttgaaccatttgactctgcatgtagcagccggagaagcagtatttca
tcacatgaaagcttcaatgtactggattccggaatttacagagtgattagtcgaagatgt
agccaatcagatgaggactctggttccgtgcacagccaaaatatgtccgatgaagagcgg
cttaaagaggtttcctcacatcatgaagaggaacaggcagaaatggacaatatctcccag
gcttctgtgatggtggactcagatcggagtgagactttgcttccattcagtattccattg
tcatttcgctctccatctcctcgtgtctctctccaggccgtaaaagacagtgtttcaagt
tttgtacgtaagactacagaaaagattgggacatttcatgcgagccctgaaatccactcc
aggtcagatgtgaaagatgaagaccagaaaattgaagtagcagtcactgttgtagaagac
ccagaagagacagaatatgaagctgattcacaagctgaaatccctgaggtggatctgctt
caggagctggaaaccataaatgccaacaccattgccagactccaagaccccgttgctttg
tttgaaccagaaacagcaaggaagatcttagaggagtggatcccacatttggaaaagatg
aattgctttcaggagactctccacccttctcgtagttcacccaagttcaacattgatttg
cgaaggccacatctggccagtggtgaccagggaatgacattgtctgataatgaacagaag
gaatgcagtgatgtggtccacccagaggaagaagagcaagtgctgcagaatgacttgttt
cctccaaaaaaagcaccacagcactgcttccatgtaaggcctccctgctccttaccagca
cacattctgaaagatcttgtagtcctaacgaccctctgcttggagttaaaagtgtttggt
ggtgtaaaagagtggtcgtgtgagaatgttgatcaggaccttctggcctcctcttacctc
acatgccaattcatgaaaaattactttttcctgttggatcttactagagtaaagcactac
gtactcttcaattattccagtgatcccaatgtgtgggaaacctacatccagggtttgaaa
gaattgactcagtccagccctgtgactttagcaatgggaaatgaaggattgacggaaatt
ttaaaactggtcaatgaggtggagccttgggacagccctctgttactcgcacatgcaaca
aggttatatgagaggtttggggaagaggctataagaccattcatcaggttttatcccacc
atttcaccctctgaaattgtacagctttgccggagtcatccagatcactttttgacctac
ctacacagtcttgtgaaatcaaaacctgaagaccaaagatcatctttcattatatctctt
ctccaacccgaatcattaaaactggaatggttattgttggctatacgtcatgatgcacca
caaatgaataactctattgatgctgcaggaaaccccagaccgcgatctcatttgtttaca
tggggctacgaagatctgataatgctcctgattagatttccagctgattttacaacgaaa
gagaaaatgtctgacatttgtaaaacccatggattctggacaggagccctgtatctctgc
tcagagatggatagaagagcagaagcctttacaattattatatatctggatgatgtaagc
cttttagatcggaacaagggtttaactccagaaactctggatgaatggaaatttatatta
tcccgtatgcagacttgtcgtagtaatcatctccatcagggaataccacaaggaaataca
gtcagcaatgggagctgtgattggcccaatagcttcactgttgaaaatgttgcccttcta
cttgccaaagttattggcccagataatgctatgcctctccttcaggaatgtggattcaca
gaagaattatctgaaaggcttataaatgtatttgagattttaagagttgccgaaaaaaga
caaagagccatgattcagtgtatgttggaaaagtgtgaaagattcctgtggtcctaa
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