Pleurodeles waltl (Iberian ribbed newt): 138284868
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Entry
138284868 CDS
T10800
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138284868 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138284868 (TNPO1)
03009 Ribosome biogenesis [BR:
pwl03009
]
138284868 (TNPO1)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138284868 (TNPO1)
Ribosome biogenesis [BR:
pwl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
138284868 (TNPO1)
Pre-60S particles
138284868 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
IBN_N
Vac14_Fab1_bd
Cnd1
TOR1L1_N
TPR_IPO5
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
HEAT_Maestro
HEAT_GCN1_C_2
UNC45-central
TPR_TTI1_C
INTS7_N
Dopey_N
RTP1_C1
SCD
VPS15-like_hel
Motif
Other DBs
NCBI-GeneID:
138284868
NCBI-ProteinID:
XP_069080196
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All DBs
Position
1_1:complement(428979836..430150085)
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AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTSTQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKTECLNNIGDASPLIRATVGILITTIASK
GELQNWPDLLPKLCGLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNVMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMLHVDSFIENLFALAADEEPEVRKNVCRALV
MLLDVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPVCKDVLGRHLAKL
IPVLVNGMKYSEIDIILLKGDVEDDEAVPDSEQDIRPRFHRSRTVAQQHEEDGIEEDDDD
DDELNDDDAISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVIKESGILV
LGAIAEGCMQGMITYLPELIPHLIQCLADKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQSMLHNAQPEQYESPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFLHVKPCIADFMPILGTNLNPE
FISVCNNATWAIGEISIQMGIEMQPYVPMVLHQLVEIINRPNTPKTLLENTAITVGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPGGVVQDFIFFCDAVA
SWISPKDDLRDMFCKILHGFKDQVGDDNWRRFSDQFPPPLKERLAAYYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgagtggaagccggacgagcaaggcctgcagcaaatcctgcagctgctcaag
gagtcgcagtccccagacacgtccacgcagaggactgtgcaacaaaaactagaacaactc
aatcagtatcctgatttcaataattacctgatatttgtgctcacaaagttaaaatctgaa
gatgagccaactcgttctttgagtggactgatactgaagaataatgtgaaagcacatttt
caaaactttccaaatggggtgaccgacttcataaaaaccgaatgtctaaataatattggt
gatgcctccccactaatcagagccactgttggtatcctgatcacaactattgcttctaag
ggggagttgcaaaattggcctgatcttttaccaaagctgtgcggactattggattctgaa
gattacaatacatgtgagggagcatttggagcccttcagaagatatgcgaagattctgct
gaaattctggacagcgatgtgttggacagacctctcaatgtcatgattccaaaatttttg
cagttcttcaaacacagcagtccaaaaataaggtctcatgccgttgcctgtgtgaatcag
ttcataatcagtaggacacaagctctcatgttgcatgtggattcctttattgaaaatttg
tttgctctggctgctgatgaagaacctgaagtccgtaaaaatgtatgccgagcacttgtg
atgttacttgatgtacggatggatcgcctacttcctcacatgcacaatatcgttgagtac
atgctacagaggacccaggatcaagatgaaaatgttgccttggaggcttgtgagttttgg
ctgacgttagcagagcagcctgtatgtaaagatgttcttggtcggcatcttgcaaaattg
atacctgtgttggtgaatggcatgaagtattccgaaatagacataattttgctaaagggg
gacgttgaagatgatgaagcagttcctgatagtgaacaggacatcaggcctcgttttcat
cgatcccgaactgtagcacagcagcatgaggaagacggtattgaggaggatgacgacgat
gatgacgaacttaatgatgacgatgcaatatcagactggaatttaaggaaatgttcggct
gcagcattagatgtccttgcaaacgtatttagagatgagcttttacctcatattttacca
cttttgaaagaactgctgtttcatccagaatgggtgataaaagagtccggaatcttggtt
cttggagcaattgctgaaggatgcatgcagggcatgattacataccttcctgagctcatc
ccacacctaattcagtgcctggcagataaaaaggctcttgtgcgttccattacatgctgg
actttaagccgatatgcacactgggttgttagtcagccccctgatacatatttgaagcca
ttaatgacagagttgcttaagcgtattctagacggcaacaagagagtacaggaagctgcc
tgcagtgcctttgctacgctggaagaagaagcctgtactgagcttgtcccctatcttgct
tatattcttgatacactggtgttcgcctttagtaaatatcaacataaaaaccttctcata
ctttatgatgctattggaacgttagcagattctgtgggccatcatttaaataaacctgag
tatattcagatgcttatgcctccactgattcagaaatggaacatgttgaaggatgaggat
aaagatcttttcccattgcttgagtgcctgtcttcagttgccactgcattgcagtctggc
tttctaccatactgtgaacctgtttatcagcgctgcgtgaatcttgtgcagaagacgctt
gcacaatcaatgttacacaatgctcagccagaacaatatgaatcaccagacaaagatttt
atgattgttgctcttgacctacttagtggcctggcagaaggcctaggaggcaacatcgaa
cagctcgtagcacgtagcaacattcttacattaatgtaccaatgcatgcaggataaaatg
ccagaggtacgacagagttcttttgccttgctaggtgacctaacaaaagcatgctttctg
catgtcaagccttgtattgctgattttatgccaattttggggaccaaccttaatccggag
ttcatctctgtatgtaataatgccacttgggcaataggcgagatctccattcaaatgggt
attgaaatgcagccttatgtccctatggtattgcatcagctggttgaaatcattaacagg
ccaaatacgccaaagaccctcttagagaatacagcaataacagttggtcgtcttggttac
gtttgtcctcaagaggtggctcccatgctacagcagtttataagaccctggtgcacttct
ctgcgcaatatacgtgacaatgaagagaaggactctgcattccgtggcatttgtaccatg
atcactgttaaccctggtggagtagtgcaggactttatatttttttgtgatgctgttgca
tcatggattagccctaaagatgatcttcgtgacatgttctgtaagattcttcacggattt
aaggaccaagtaggggatgacaattggaggcgtttctcagatcagtttccccctcctctc
aaagaacgccttgcagcgtactacggagtttaa
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