Pleurodeles waltl (Iberian ribbed newt): 138284981
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Entry
138284981 CDS
T10800
Symbol
GTF2H2C
Name
(RefSeq) general transcription factor IIH subunit 2-like protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022
Basal transcription factors
pwl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138284981 (GTF2H2C)
09124 Replication and repair
03420 Nucleotide excision repair
138284981 (GTF2H2C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138284981 (GTF2H2C)
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138284981 (GTF2H2C)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138284981 (GTF2H2C)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138284981 (GTF2H2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
C1_2
IBR
Zn_Ribbon_YjdM
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
138284981
NCBI-ProteinID:
XP_069080469
LinkDB
All DBs
Position
1_1:complement(438652623..438882241)
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AA seq
395 aa
AA seq
DB search
MDDEIEKTKRWEGGYERTWEVLKEDESGSLKATIDDILFKAKRKRVFQHHGQVRLGMMRH
LYVVIDGSRTMDDQDLKPNRLTCSLKLLEYFVEEYFDQNPISQVGLIVTKSKRAEKLTEL
AGNPKKHITALKKAVDMTCSGEPSLFNSLSLAMQTLKHMPGHTSREVLIIFGSLTTCDPS
NIYELIKSLNVAKIRVSVIGLSAEVRVCTVLTRETGGTYHVILDESHYKELLMQHVIPPP
ASSGSECSLIRMGFPQQTIASLSDQDAKPSFSMAQLDSNNEPGLTLGGYFCPQCRAKYTE
LPVECKICRLTLVSAPHLARSYHHLFPLDPFQEIALEEYQGERFCEGCQGELKDQNVYVC
PTCQHVFCVECDLFVHESLHCCPGCIHKNPAPAGV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaattgagaagactaagcgctgggaaggtggctacgaaagaacatgggag
gttctgaaagaagatgaatccgggtcactgaaagctacgatagatgatattctcttcaaa
gcaaagaggaaaagagtcttccagcatcatgggcaagttcggctaggaatgatgcgacat
ctttacgtggtcattgatggatcaagaacaatggatgaccaagacttaaaaccaaaccga
cttacttgttcattaaagcttcttgaatactttgttgaagaatactttgatcaaaatcca
attagccaggtcggtctcattgtaaccaagagcaaacgagcagaaaaactaacagaactt
gcaggaaatccaaagaagcacataaccgccctcaagaaagctgttgatatgacttgcagt
ggggaaccatcattgtttaactctttgtctttggccatgcagactctgaagcacatgcca
gggcatacaagcagagaggttctaattatttttggcagcctgactacctgtgatccatca
aacatctatgaactaataaagagtctaaacgttgctaaaataagagtgtccgtcatcggt
ttgtcagctgaagttcgggtctgcactgtgctcacacgtgagactggcggaacgtaccac
gtcattttggatgaaagccactacaaggagctgctgatgcagcatgtcattccacctcct
gcaagctcgggttccgagtgctcacttatccggatgggttttcctcagcaaaccattgca
tcactttcggaccaggatgccaagccgtctttcagcatggcgcaattagacagcaataat
gagccgggtcttactctaggaggttacttctgtccacagtgtagggcgaagtacactgaa
ctccctgtagagtgcaaaatctgccgccttacattggtttctgctccccacttggcccga
tcgtatcaccatctatttccgctagatccctttcaagaaattgctctggaagaatatcaa
ggagaacgtttctgcgaaggttgtcagggagaactaaaggatcagaatgtctatgtgtgt
cccacatgccagcacgtgttctgcgtagagtgtgatctttttgtccacgagtccctgcat
tgctgtccaggctgcattcacaagaatcctgctcctgcgggtgtatga
DBGET
integrated database retrieval system
