Pleurodeles waltl (Iberian ribbed newt): 138285101
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Entry
138285101 CDS
T10800
Symbol
ITGB5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04145
Phagosome
pwl04148
Efferocytosis
pwl04510
Focal adhesion
pwl04512
ECM-receptor interaction
pwl04810
Regulation of actin cytoskeleton
pwl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138285101 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138285101 (ITGB5)
04148 Efferocytosis
138285101 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
138285101 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138285101 (ITGB5)
04810 Regulation of actin cytoskeleton
138285101 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138285101 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138285101 (ITGB5)
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
138285101 (ITGB5)
Cell adhesion molecules [BR:
pwl04515
]
Integrins
Integrin beta subunits
138285101 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
DUF2975
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
138285101
NCBI-ProteinID:
XP_069080738
LinkDB
All DBs
Position
3_1:complement(1300404706..1301030927)
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AA seq
803 aa
AA seq
DB search
MQRGSGLPLHLLTALLLLDSLLHPVTGVNICTSGSATSCEDCLFIHPQCAWCAKEELGSA
RTIVSRCDYVENLIKKGCTEEYIENPTSRVNIVKNVSLSSKGSGATHSDVTQMVPQKISL
SLRPGASASFQVKVRQVEDYPVDLYYLMDLSLSMKDDLHNIRNLGTKLTEEMKKLTSNFR
LGFGSFVDKNISPFSYAAPRYQNNPCIGYKLSPNCVPSFGFRHLLSLTDKVDRFNEEVQK
QKVSRNRDAPEGGFDAILQAAVCQERIGWRKEALHLLVFTTDDVQHLALDGKLGGLVKPH
DGHCHLNEANEYSASSEMDYPSLALLGEKLSESNINLIFAVTKNHYMLYKNFTSLIPGTT
VEILDKDSRNILQLIINAYNNIRSKVELTVGDSPDDISLGFTATCQDGLSHPGLRKCGDL
KIGDTVSFDVSVEARNCPPEDTTHTFTIKPVGFRDTLEVMVSYNCSCGCTKGVELDSMKC
SGNGTYQCGLCGCNVGHLGAKCECREGDNGNMYQNLCREAEGKTICSGRGECSCNQCLCF
ESEFGKIYGTFCECDDFSCARYKGVLCSGHGECHCGECKCHVGYIGDNCNCSTETDSCVS
VDGQMCSDRGNCVCGRCQCVEPGAFGETCEKCPTCPDACGTKRDCIECRLFSSGRLADNN
TCQKLCKDEIVTVEVLDTVDEEAVQCVYKTENDCVMRFTYSEDASGKSVLTVLKEPECAT
APNALIVLLAVVGSIILIGLALLAVWKLLVTIHDRREFARFQNERTRARYEMATNPLYRQ
PISTHNVDMVYNMLNKTYNGAIE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggggcagcgggctgcccttgcaccttctaaccgccctcctgctgctggactcc
ctgctgcatcccgtcacaggtgtcaatatttgtaccagtggcagtgccacttcctgtgaa
gactgcctcttcattcacccccagtgtgcctggtgtgcaaaggaggagcttggcagcgcc
agaaccattgtttcaagatgtgactatgtagaaaacctgattaaaaaaggttgcactgag
gagtacattgaaaatcccactagcagggtaaacatagtgaaaaatgtttccctgagtagc
aaaggatccggtgccactcactctgatgtgacccagatggtacctcagaagatctccctg
agcctgcggcctggtgcctcggcctcctttcaagttaaagttcggcaggtggaggactac
ccagtagatctctactacctgatggatctctccctctcgatgaaggatgacttgcacaat
attcgaaatcttggcaccaaactcactgaggaaatgaagaaactcaccagcaacttccgt
ttgggatttggctcttttgttgacaagaacatctctcctttctcctatgcggcaccaaga
tatcaaaacaatccctgcattgggtacaagctatcgccaaactgtgttccttccttcggt
ttccgtcacttactgtcccttacagataaagtagaccgcttcaatgaagaggttcagaag
cagaaggtgtcccgaaacagagatgcaccagaaggtggctttgatgccatcctacaggct
gctgtgtgccaagaaaggattggctggcggaaggaggccttgcacttgcttgtgtttacc
acagatgatgtgcagcaccttgctctagacgggaagcttggtggactggttaagccacat
gatggtcactgtcacctgaatgaagcaaatgaatatagtgcctcaagtgaaatggattat
ccatcacttgcactccttggagagaaactctctgaaagcaacattaatctcatttttgcc
gtcacaaaaaaccattacatgctctacaagaattttacgtccctgatacccggaacaaca
gtggagatcctggataaagactccagaaatattctccagctgataattaacgcctacaac
aatattcggtctaaggtggaactaaccgtaggagacagcccggatgatatcagcttggga
ttcacagccacgtgtcaagatggactctcacatcctgggctcagaaaatgtggggatctc
aaaattggagacactgtatcttttgacgtttctgttgaagctcgtaactgccctcctgag
gacaccacacatactttcaccattaaacctgttggattccgggacacactggaggtgatg
gtctcctataactgtagctgcggatgtaccaaaggggttgagttggacagcatgaaatgc
agcggcaatgggacataccaatgtggtctgtgtggatgcaacgttggtcacctgggagca
aagtgtgagtgtcgcgagggagacaatggcaacatgtaccagaatctgtgcagggaagct
gaaggaaaaaccatctgcagcggccgtggcgagtgcagctgcaaccagtgcctctgcttc
gagagtgagtttggaaaaatctatggaacattttgcgagtgtgatgacttttcctgtgca
agatacaaaggtgtcctgtgttcaggtcatggagagtgccactgtggggaatgcaaatgc
cacgtgggctacattggagacaactgcaactgctcaacagaaaccgacagctgtgtgtca
gtcgatggacagatgtgcagtgacaggggcaactgtgtatgtggaagatgccagtgtgtg
gagccaggagcttttggggagacgtgtgagaagtgccccacttgtcctgacgcttgtggc
accaaaagggattgcattgagtgccgcctgttcagctcaggcagactggctgacaataac
acctgccaaaaactctgcaaggatgagattgtgacggtggaggttctcgacacagttgac
gaagaggcggttcaatgcgtttacaaaacggaaaatgattgtgtaatgagattcacctac
tccgaggacgccagtgggaagtctgtcctgacagttctgaaggaaccagaatgtgccact
gctccaaatgcactaattgtcctgttggccgtagttggcagcattatcttgatcggattg
gcacttcttgctgtctggaagcttctggtcaccattcatgacaggcgtgagttcgcaaga
tttcagaatgagcgcacccgggcaagatatgaaatggcaaccaacccactttataggcaa
cctatctcgacgcacaacgtggacatggtctacaacatgctcaacaagacatataatgga
gcaattgaatga
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