Pleurodeles waltl (Iberian ribbed newt): 138285139
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Entry
138285139 CDS
T10800
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Cell adhesion molecules [BR:
pwl04515
]
Immunoglobulin superfamily
DSCAM family
138285139 (DSCAML1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138285139
NCBI-ProteinID:
XP_069080823
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Position
3_1:complement(1336227283..1336695983)
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AA seq
2058 aa
AA seq
DB search
MWLVTLLLLYSVHKARAEDVGTSLYFVNESVQQVTFFSTVGVVIPCPAAGSPSAALRWYL
ATGEDIYDVPHIRHVYPNGTLQLFPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYSVRVEDQRSMRGSVAVFKCLITSTVQEYVSVVSWEKDTVSIVPENRFFITFYGG
LYILDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPSESSPTILDSFSSREVKAGQ
EVELPCIASGYPNLSSRWIKDGRPVPTDSRWSKRGTGLTISDLRVEDSGTYICEVINNFG
SAEVSGTLTVIEPLRVTLTPKKLKTGIGSTVILSCALTGSPEYIIRWYRNTELVVPDDFI
SIRGIGNETLLITSAQKSHSGAYQCFAIRKALTAQDFSIIVLEDGTPRITSSFSEKVVNP
GEQFSLMCTAKGAPPPTITWTLDDEPIVKDNGHRSNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCAARNSVGSAEYQARINVRGPPSIRTMKNITAVAGRDTFIHCRVIGYPYYSIKWLKD
ALLLPDNHRQVVFENGTLKLMDVQKVMDEGEYLCSVLIQPQLSISESVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNAAATVSRERQLVVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAHGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGFYLCQASNGVGPDISKAM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAIFT
KDNSDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQATRNVSPTINQANIVDLHPALVYSIR
MYSFNKIGQSGPSKEVTISTEEAAPDGPPMDVTLVPVTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENGPGSNGQYSIVEMKATGDSEIYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIYWSLYSDGEWGE
MQNITTTRERAEMRALEKFTNYSVQVLAYTQAGDGVRSSVLYLQTKEDIPGPPAGIKAVP
SSSSSVVVSWLPPTKPNGIIRKYTIFCSSPGSGQPAPSEYETSPELLYYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLLCSSVGEPAPAV
KWTKDSEDSAIPVTVDGHRLIQNNGTLILRSVKAEDSGYYTCTATNTWGFDTIIVNLLVQ
VPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSGERAFK
LDNLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSCSKDQPLLTHVNATHARLNLQ
GWSSGGCPITGIVLEYRPKGTWAWQTLRTNNSNEVFLTELREATWYELRMRACNSAGCGN
ETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFNQAVNPQSFCTGVSLHHPALVQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITAAESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSITSTSTP
SEPGICRFTASPPKPLESDRCKNVAVPIPHRANKSKCTSGEYSNLPLYMKSEAMFRKTDV
HDPCPVVPPREASIRNIARSSYHSQARHMTLDPASKGLAPPHPSSSTTTALPQRTLTMPG
SANSANAASAAAATAAAAAAAANAAADTTAVAASAEPRMTAHSKMGGSRDSLLEMSTSGV
GRSQKQGAGAYSKSYTLV
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaaccctcctcctgctgtactccgtccacaaagctcgtgcagaagatgtt
ggaaccagcctttactttgtgaatgagtctgtgcagcaggtcaccttcttcagcacagtg
ggggtggtgatcccctgcccggccgcagggtcccccagcgctgcccttcgatggtacctc
gccaccggggaggacatctacgatgtgccccatatccggcacgtgtacccgaatggcacc
ctacaactgttcccattctcgccctctgccttcaacagcttcattcacgacaatgactac
ttctgcaccgccgagaactctgccggcaagatccgcagtcccaacatccgcgtcaaagca
gttttcagggaaccatactcagtgcgggttgaagaccagaggtcgatgcgtggaagcgtt
gctgttttcaagtgcctcatcacctctactgtgcaggaatacgttagtgttgtatcgtgg
gaaaaggacacagtctccattgtcccagaaaataggttttttattactttctatggagga
ttgtacatactcgacgttcaaaaggaagacgccttgtctacgtatcggtgtatcaccaag
cacaagtacagtggggagacccgacagagtaatggggcccggctctccgtgtcagaccct
tctgagtccagccccaccatcctggacagtttcagttcacgggaagtgaaagcggggcag
gaagtagagcttccgtgcatcgcttccgggtacccgaacctgtccagccgctggatcaaa
gatggtcgccccgtgcccaccgacagccgctggagtaagcgcggcacaggcctcaccatc
agtgacctgcgcgtggaggacagcggcacctacatctgcgaagtcatcaacaactttggg
tcagcagaggtcagcggcaccctgactgttatagaacccctgcgagtaaccctcacacca
aagaagctgaagactggcattggcagcacagtcattctgtcatgtgccctgaccggctcg
ccagagtacatcatccgctggtatcgcaacaccgaactggtggtacccgatgacttcatc
tccattcggggcattggaaacgagaccctgcttatcacttcagcccagaagagccactct
ggtgcctaccaatgctttgccatccgtaaagcactgaccgcccaagacttctccatcatc
gtcctggaggatggcacccctcggatcacctcatccttcagtgagaaggtggtgaaccct
ggggagcagttctctctgatgtgcacggccaaaggtgcccccccacccaccatcacatgg
acactcgacgatgagcccatcgtgaaggacaatgggcaccgcagcaaccagtacaccatg
tcagacggtaccaccgtgagccacatgaacgtcacaagcccgcagatcaaggatggaggc
gtgtaccggtgcgccgcgcgcaactcggtgggcagtgcggagtaccaagcgcgaataaac
gtaagaggtccccccagcatccggacgatgaagaacatcacggctgtggccgggcgggac
acatttatccactgccgggtcataggatacccctattattccatcaagtggctgaaggac
gcgctgctgctgcctgacaaccatcggcaggtggtctttgaaaacggcaccctcaagttg
atggacgtgcagaaagtgatggatgagggggagtacctatgcagcgtgctcatccagccc
cagctatccatcagcgagagtgtccatgtcacagtaaaagtcccacctcttatccaaccc
ttcgagttccctccggcgtccattggccagctgctctacatcccatgtgtggtgtcttcg
ggggacatgcccatccgtatcacctggaggaaggatgggcaggtgatcatttctgggtca
ggggtcaccattgagtccaaggagttcatgagctccctacagatatccagtgtgtccctc
aaacacaatggcaactacacctgcattgccagcaacgcagctgccacagtcagccgggag
cggcagcttgttgtgcgagtgccccctcgcttcgtggtgcagcccaataaccaagatggc
atatatggcaaagccggagtgcttaactgctcggtggatgggtaccctccaccaaaagtc
atgtggaagcatgcgcatggaagtggaaatcctcagcagtaccaccctgtgccacttacc
ggacgcatccagatcctgcccaacagctcattgctcatccggcatgttctggaggaggac
attggattctacctatgtcaggccagcaatggtgtgggtcccgacatcagcaaagccatg
ttcctgactgtcaagattccagccatgatcacctcccatcccaatactactatcgccatt
aaaggccagacgaaggaactgaactgtacagcacggggagagcgccctattatcatccgc
tgggaaaagggtgacacagtcattgacccagaccgcaacatgagatatgccatcttcacc
aaggacaacagtgatgaggtcatctcgacgctaaagttaaagccagcggaccggggagac
tctgtgtttttctcatgccatgcaatcaactcatacggcgaggaccgtggactgatccag
ctgaccgttcaagaaccccctgaccctccagaactagagatccgtgaggtgaaagcacga
agcatgaatcttcgctggacccagcggtttgacggcaacagtataatcaccggctttgac
attgagtacaagaacaagtcagattcctgggatttcaaacaggccacccgtaatgtctct
ccaaccatcaatcaggcgaacatcgtggacctgcacccggccctggtgtacagcatccgc
atgtattccttcaacaagattggacagagcggacccagtaaggaggtgaccatcagtacc
gaggaagcagcccctgacgggccccccatggatgtgaccttggtgccagtgacatctcag
agtatccaggtgacgtggaaggcaccaaagaaggaactgcagaatggtgtgatccgggga
taccagattgggtaccgggagaatggaccaggcagcaatggccagtacagcatagtagag
atgaaggccacaggtgacagcgagatctacaccctcgacaacctcaaaaagtttgcccag
tatggggtagtggtgcaggccttcaaccgagcaggcactggaccctcatccagcgagatc
aacgccaccacgttagaggatgttcccagtcagccccctgagaatgtgcgggccctctcc
atcacctcagatgtggccgtgatctcgtggtcggaacccccgcgtagcaccttgaacgga
gttttgaaggggtaccgtgtcatctactggtctctctactcggatggggaatggggagag
atgcagaacatcacaacgacacgtgagcgcgctgagatgagggctctggagaagttcacc
aactacagtgtgcaggtgctggcttacactcaggcaggagacggcgtgaggagcagtgtg
ctgtatctgcaaacgaaggaagacattccaggtccccctgcgggcatcaaagcggttcct
tcttcgtccagcagcgtggtggtctcctggctgccccctaccaagcctaacggtatcatc
cgcaaatacaccatcttctgctccagcccgggctctggccagccggctcccagcgagtat
gagaccagtccagaactgctctactatcgaattgcccacctcaatcgtggacagcagtat
cttctttgggtggcagctgtgacctcagctggtcgtggtaacatcagtgaaaaggtcacc
atcgagcctgctgggaaggctcccgcaaagataatttcgtttggagggacagtgaccacg
ccctggatgaaagatgtgcggttgctgtgtagttctgtcggggagccagcaccagctgtg
aaatggaccaaggacagtgaagactctgctatccctgtgacagtggatggccacaggctg
attcagaacaatggcacattgatcctgcgctctgtgaaggccgaagattctggatactac
acatgcacagccaccaacacctggggttttgatacaatcatcgtcaatctgctagttcaa
gtgccaccagaccagccgcgcctcacggtatccaagacatcagcttcctccatcacactg
acctggattcctggtgacaatggtggcagctcaataagaggctttgtgctccagtactcg
gtggacaacagcgaggagtggaaagacgtcttcatcagctctggggagcgtgcctttaaa
ctggataatctcaagtgtggcacctggtacaaggtgaagctggcagccaagaacagcgtg
ggtgccggccgcatcagtgaaatcatcgaggccaagacccatgggcgagaaccttcctgc
agcaaagaccagcccctgctcacccatgtcaatgccacacatgcacggctgaacctgcag
ggctggagcagcggcgggtgccccatcaccggcatcgttctggagtaccggcccaaggga
acctgggcttggcagaccctgcggaccaacaattcgaatgaggtcttcctcactgagctg
cgcgaggccacctggtatgagttgagaatgcgggcatgcaacagcgccggctgcggcaat
gagacggcacagttcgccacgttggactacgatggcagcaccatcccccccatcaaatct
gcccaaggtgaaggggatgacgtgaagaaactgttcaccatcgcttgccccgtgatcttg
gcaacacttggcgtcgctcttctgttcatcatccgcaaaaagagaaaggaaaagcgactc
aaaaggctgagagatgcaaaaagcttggcagagatgctaataagcaagaacaaccggagc
tttgacactccagtcaagggcccgcctcagggaccacggctgcacattgatattcccagg
gtccagcttctgattgaagacaaggagggcatcaaacagctgggggatgacaaagctaca
attcctgtgacagacacagagttcaaccaggctgtgaatccccaaagcttctgcacaggt
gtctcattgcatcaccctgcacttgtccaaaacacggggcctttgattgacatgtccgac
atccgacccgggaccaatccggtatctcgtaagagtgtgaaatcggcacacagcactcga
aaccgatactccagccaatggacgctcaccaaatgtcaggcctccacaccagcacggact
ctgacatcggactggcgaacagtagggtcacagcacggtattactgctgcagaaagcgac
agctacagtgccagcttatctcaggacacagacaaagggcgcaacagcatggtgtccaca
gagagtgcatcatcaacgtatgaggagttggcacgggcgtacgaacatgccaagttagaa
gagcagcttcagcacgccaagttcgagatcacggagtgcttcatctcagacagttcatcg
gaccagatgacgactggcacaaatgagaatgcggacagcatcacctccaccagcaccccg
tcagagcctggcatttgccgcttcacagcctcaccccccaagcccttggagagcgaccgc
tgcaagaacgtggctgtgccaatccctcaccgggccaacaagagtaagtgcacatcaggt
gaatactccaatctccccttgtacatgaaatctgaggcgatgttccgaaagaccgatgtt
cacgacccatgccctgttgttccaccacgggaggcctccatccggaacatagccaggtct
tcataccactcacaggcccggcacatgactctggacccagcaagcaaggggctggcccca
ccacaccccagctcctccacaacaaccgcgttacctcagagaactctaactatgccgggg
tcagcgaattcggccaatgcagcttctgctgcagctgccaccgctgctgctgctgcagcc
gccgccaacgcagccgctgacaccactgctgtcgctgccagtgcagagcctcggatgact
gcacacagtaaaatggggggctccagagactctttgttggaaatgagtacttcgggagtc
gggagatcccaaaaacaaggtgctggggcctactccaaatcctacacgctagtgtag
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