Pleurodeles waltl (Iberian ribbed newt): 138285512
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Entry
138285512 CDS
T10800
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
138285512 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwl03036
]
138285512 (HDAC4)
Enzymes [BR:
pwl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
138285512 (HDAC4)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
138285512 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
138285512
NCBI-ProteinID:
XP_069081608
LinkDB
All DBs
Position
3_1:1696482883..1697642629
Genome browser
AA seq
1074 aa
AA seq
DB search
MNSQSHPDGLSGRDQPVELLNPARGTHMPSAADVATALPLQLSPSTVPMDLRLDHQFSMP
EPTLREQQLQQELMALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLHEHIKQQQEILAMK
HQQELLEHQRKLEQHRQEQEMEKQQREQKLIQLKNKEKGKESAVASTEVKMKLQEFVLNK
KKALAHRNLSHCMSNDPHFWKTQHSSLDQSSPPQGGLSPSYNHPVLGMYDSKDDFPLRKT
ASEPNLKLRSRLKQKVAERRSSPLLRRKDGPGITALKKRSLDIPDSMCNSAPGSGPSSPN
NSSNNISAENGVVGSAASIQAEPGLAQRLANRDGSISQLPLYTSPSLPNITLGLPATATS
NGGTGQQEAERLPLSNLQQRISLFPSAHLSPYLSTSTLEREGGNGHSALLQHMVLLDQPS
SQNPLVTDWYLSGLGALPLHTDRVSPTIHKLRQHRPLGRTQSAPLPQNAQALQQLVIQQQ
HQQFLEKHKQQFQQQQLHINKMIPKPAEPSRQHESHPEETEEELREHQGLLEEPFAERLA
AQKEAQLLASLVQVKQEPLESEDDDSELESGRRPTEQELLFRQQALMLEQQRILQLRKYQ
ASMEAAGMSVSFGGHRPLSRAQSSPASATFPMSVQEVPTKPRFTTGLVYDTIMLKHQCTC
GNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLN
RQKLDSSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVASGELKNGF
AVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRMNVTKILIVDWDVHHGNGTQQAFYGD
SSVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMEDADYLTAFRTV
VMPIASEFAPDVVLVSAGFDAVDGHPAPLGGYKLSAKCFAYLTKHLMALAGGRIVLVLEG
GHDLTAICDASEACVSALLGNELDPLPERILQQRSNANAVASIEKVIAIHNKYWSSLQRY
SSTVGYSLMEAQKCESEEAETVTAMASLSVGVKQVEHRNVHRQEEEPMEEGAPL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccaaagccacccagatgggctttcggggcgagaccaaccagtagaactgctg
aacccagctcgaggaacccacatgcccagcgccgctgacgtggccacagcactgcctttg
caactctcccccagtactgtgccaatggatctccgcctggaccatcagttctccatgcca
gagcctacccttcgtgaacagcaacttcagcaagaactcatggcactgaagcagaagcag
cagattcaacggcagctgcttattgcagagttccagcgacagcacgagcagctttcacgg
cagcatgaagctcagttgcatgagcatatcaagcagcagcaggaaattcttgccatgaag
caccagcaggaactgttggagcatcagcggaagctcgagcagcaccgtcaggaacaagaa
atggagaagcagcagagagaacaaaagctgatccaactgaagaacaaggaaaaggggaaa
gagagtgccgtggccagcaccgaggtgaagatgaagttgcaggagtttgttctcaataaa
aagaaagccttggcccaccgcaatctgagccactgcatgtccaacgacccccacttctgg
aagactcaacacagttctttggaccaaagctcacctccgcagggtggtctctcaccctct
tacaatcatcccgtgcttggcatgtatgattctaaggatgacttccctcttcgaaagaca
gcatcagaaccaaatttgaaattgcgctctaggctaaagcagaaggtggcggagcgacgg
agcagccctcttctgcggagaaaggatgggcccggcatcaccgctctgaaaaaacgatca
ctggacattccagactcaatgtgcaacagcgctccaggatccggacccagctcgccgaat
aacagctccaataacatcagtgcagagaatggagttgtaggatcggctgcaagtattcaa
gcagagcctggcctggctcagagattggcgaatcgagatggatccatcagtcagcttcca
ctttatacatcaccttcacttcccaacattactctcgggctgccagccactgccacttcc
aatggtggcacaggacagcaagaggcagagcgactgcccctctccaacctacagcaacgg
atctccttattccctagtgcccatctctcaccgtacctgagcacaagcacccttgagaga
gagggtgggaatggccatagcgcactcctgcaacacatggtcttattagatcagccttca
tcacagaatcccctggtcacagactggtatctttcaggcttgggggcattgccactccat
actgatcgagtgtcaccaacaatacacaaactgcgacaacaccgcccgctgggccgtacg
cagtcagcaccactcccacagaatgctcaagccctgcagcagctagtaatacagcagcag
catcagcagttcctggagaaacacaaacaacagttccagcagcagcagctacacattaat
aagatgattccaaagcctgctgaaccatctaggcaacatgagagccatcctgaggagact
gaagaggagttgcgtgagcaccagggacttctagaagagccatttgctgaacgcctggcg
gctcagaaggaagcacagctcctagccagtctggtgcaggtaaagcaggagcccctggaa
agtgaggacgatgactcggagttggaatctggaaggaggccgactgagcaggaacttctc
ttccggcagcaagccctgatgctggagcagcagcgcattctccagttaagaaagtaccaa
gcttctatggaggcagctggcatgtctgtgtcctttggaggtcaccggccactttcaaga
gcacagtcctcccccgcttctgccaccttccccatgtctgtccaggaagtgcccaccaag
ccacgcttcactacaggtcttgtatatgacactataatgctgaaacaccagtgcacgtgt
gggaataccaacagccaccctgagcatgccggaaggatacaaagcatctggtcccggctt
caggaaaccggcctgcgtgggaaatgtgagtgcattcgtggacgcaaagcaacgctagaa
gagctacaaacagtccactctgaggcacacactcttctctatggtactaatcccttgaat
cggcagaaactggacagttctttaacatccatgtttgttcgcctgccttgtgggggtgtt
ggagttgacagtgacacaatttggaatgaagtgcattcatcgggtgcagctcgtcttgct
gtgggctgcgtagtggagctggtctttaaggtggcatcaggagagctcaagaatgggttt
gcggtggtgcgtcctccaggtcatcatgcagaagagagtacacccatgggattctgctac
tttaactcggttgccattgcggccaagcttctccaacagagaatgaatgtgacaaagatt
ctcatcgtggactgggatgttcatcatgggaatggcacccaacaggccttctacggtgac
tccagcgtgctatacatttcacttcaccgctacgatgatggcaacttcttcccaggcagt
ggcgctcctgatgaggttggcaccggtgctggcgttggcttcaatgtaaatatggcattt
actggtggtctggatcctcccatggaagatgcagactatttaactgctttcaggacagtt
gtaatgccaattgccagtgagtttgccccagatgtggtactggtgtcagctgggtttgat
gcagtggacgggcaccctgctcctcttggagggtacaaactgtcggcaaaatgttttgcg
tacctgacgaagcatctgatggcactagctggtggacgtattgttctagtactggaaggg
ggccatgatctcacggcaatctgtgacgcctctgaagcatgtgtttctgctttgctggga
aatgagctcgatcctttaccagaacggattttacaacaaaggtcaaatgcaaacgcagtg
gcatcaatcgagaaagtaattgcaatccacaataagtactggtcttcacttcagcgctat
tcctccactgttggatattcattgatggaggctcagaagtgtgaaagcgaagaagcagag
actgtgactgcaatggcatccttgtctgtgggagtgaagcaggtagagcacagaaatgtt
cacagacaagaggaagagccaatggaagagggggctcccctgtag
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