Pleurodeles waltl (Iberian ribbed newt): 138285556
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Entry
138285556 CDS
T10800
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03440
Homologous recombination
Brite
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
138285556 (BARD1)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
138285556 (BARD1)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
138285556 (BARD1)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
138285556 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138285556
NCBI-ProteinID:
XP_069081737
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Position
3_1:1722607625..1723061935
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AA seq
804 aa
AA seq
DB search
MAPPLAIRCGNVVTSPSKRQKEMSSWQEKHPQSARREWIHTRAALELLEKRLLCSLCDGM
LEEPVCLGGCEHVFCRKCVGSSIGSECPVCQTPAWVKDVQINRQLANMIQLCSKLHKVLD
GSHKPDEKKRVFTSVKASNMPKADNKKKQIRMWFSPRSGKVKCVLDKLPKQEQPLSSGGA
LYQAACSTFAFLPSPPNEDTAKKQKKPATKSKKSKKRQLDVINQQWGVGKKRPKGVSGKW
SNEDAIQPQEERVVSFCSQPVVLCSPDPCPVEEASLELGLAKESGPSQNGSVCHLQLSVQ
MSPVEKTAENELVLRKEDILPVDSPSLESKPKRGRKLSDSFPTPSPASKRLQRVKPSVNI
GGSTEPSKKCSPVRVSPRNNHIAIAHIMSPIAVSPLPVKDQLSGDEKGVCTPHKSPIMPP
STPSSCTRKHAETSLLSPSRNLSAKRNYKGETVLHIASIKGDLSAVEDLLKNGGDPNVKD
HAGWTPLHEACNHGHVAVVELLLQHRALVNTTGYQNDSPLHDAVKNGHTAIVKLLLAHGA
SREAVNIFGLRPVDYAENEEMKSVLLIPSGNEESLSDGQCPVPVSVSQQREGPIVLMGSG
LSFAQQKVLIKLGGVLKVGRCTEFNSTVTHVIVPDEGVVSTMKGMLGILAGCWIVKFQWV
HACLQSRLREQEEPYEIPGGPIRGRLNKEHLLPNLLDGCYFFFLGWFKTHCKEDLMELVK
AAGGQVLARQPKPDSDVTQTVNTVAYHAEASSDQSFCTQYIIYDKSTNYCPTRVRQGKVW
TAPSSWLVDCITSFRLLPVPSDNV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgccgttagcaatccgttgtgggaacgttgttacaagtcccagcaaaagacaa
aaagagatgtcttcctggcaggagaagcacccgcagtccgcccgccgggagtggatacac
acacgtgccgcacttgaactattggaaaagaggctgctgtgctcactctgtgatggcatg
ctggaggagcctgtgtgcctgggtggatgtgagcatgttttctgcagaaaatgtgtgggc
tcatccattggcagtgaatgtcctgtgtgccaaactccagcctgggtgaaagatgtgcag
atcaaccggcagttggccaatatgattcagctttgtagtaaacttcacaaggtgcttgat
ggttcccacaagcctgatgaaaagaaaagagtgtttacgtcagtgaaagcgagcaacatg
cccaaagctgataataagaagaaacagatccgaatgtggtttagccctcgaagtggaaag
gtcaaatgtgtcttggacaagctaccaaagcaggagcagccgctttctagcggaggcgcc
ctataccaggctgcctgttctacatttgcgttcttgccctccccacctaatgaagatact
gccaaaaaacagaagaaaccagccaccaagtccaaaaaatctaagaagagacaactggat
gtcataaaccagcagtggggcgtcggaaagaaacgaccaaagggagtctctgggaagtgg
agcaatgaagatgcgattcaaccccaggaagaaagagtagtctctttctgtagtcagcca
gttgtcttgtgcagtccagacccctgccctgttgaggaggcatccttggagctaggactg
gcaaaagaatcgggcccttcacagaatggaagtgtgtgccacttacagctgtctgtacag
atgagccctgtcgagaaaactgctgaaaatgagttagtccttcgtaaggaggacattctt
cctgtggattcaccctctctagaaagtaaacctaaaagggggaggaagctgtctgattct
tttcccactccctcacctgcttcaaaaagactacagcgtgtaaaaccaagtgtcaatatt
ggtggttccacagaaccttccaagaagtgttcaccagtgcgtgtttcacctagaaacaat
cacatcgctattgctcatatcatgtcgcctattgcggtttctccactgccagtgaaagat
cagctatctggggatgagaagggcgtctgcacgcctcacaagtcacctattatgcctccc
agtactccgtcttcctgcacccgtaagcatgcggagacatccttactcagcccttccagg
aacttgagtgcaaagcgcaattataagggagagactgtgttgcatatcgcatccattaag
ggcgacctttcggcagtagaagacctcttgaaaaatggtggtgaccccaatgttaaagac
catgcaggatggacacctctgcacgaggcctgcaatcatggacatgtggcagtcgtggag
ctgttgctgcagcaccgggcattggtgaacacaacgggttaccagaatgactccccctta
catgacgcagtcaaaaacgggcacactgccatagtgaagctacttctggctcatggagcc
tcgcgggaagctgtcaatatattcggtctgcggcctgtggactatgcagagaatgaggag
atgaagtcagtactgctgataccgtcaggaaatgaggaatccctttcagatggccaatgc
cctgttccggtgagcgtgagccagcagcgcgaaggtccaattgtcttaatgggaagtggc
ctcagttttgctcaacagaaagttctgatcaagcttggtggagtcctgaaggtggggagg
tgtactgagtttaacagcactgtaacacatgtcattgtacctgacgagggcgtggtgagc
accatgaaaggcatgctgggcattctggctggctgctggatcgtaaaatttcagtgggtt
cacgcctgtctacaaagcagattaagagaacaagaggagccctatgaaatacctggtggc
cccataagaggtcgactcaacaaggaacatctgctgcccaacttgcttgatggctgctac
ttcttctttctcggatggtttaagacccactgcaaggaagacctgatggagctggtgaag
gcagctggcggacaggttctggcacggcaaccaaagccagacagtgatgtaactcagacc
gtcaacacagttgcctatcatgcagaagccagctcggaccagagcttttgcacccagtac
attatctacgacaagtccaccaactattgcccaacacgcgtccggcagggaaaagtctgg
acagcaccttccagctggcttgtagattgtatcacttcctttcggctgcttccagtgcct
agtgataacgtttaa
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