Pleurodeles waltl (Iberian ribbed newt): 138285701
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Entry
138285701 CDS
T10800
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138285701 (CHD1)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138285701 (CHD1)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
138285701 (CHD1)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
138285701 (CHD1)
SLIK complex
138285701 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
CHDCT2
Motif
Other DBs
NCBI-GeneID:
138285701
NCBI-ProteinID:
XP_069082078
LinkDB
All DBs
Position
1_1:complement(548445310..549617762)
Genome browser
AA seq
1802 aa
AA seq
DB search
MNGKSDEDGASNSSGGSSHSDDTGSGSSSGSSSGSSSQSGSSDSGSDSDSGSQSESDTPG
EKKPIQAKPTPIDGTEFWKSNPSILAVQRSAILRKQQQLHQQPHSKASSDSESEEDSSSN
SEDVSSNGNKRKKHKDEDWNMSRSGSDSESDTSSSSDSEVVTNGQKSSCEGSESDYHPSH
KVKSRKPPNRIKSKHVKTFGQKKNRMDSSDEDEDYDKRISRRQTVSNICYKEDEEMKTDS
DDLLVVCGADVPQPDEDEFETIERVMESRIGRKGAVGATTTIYAVEADGDPNADYDEREP
GETQYLIKWKGWSSIHNTWETEETLNQQNVKGMKKMENFKKKDQEIKRWLKSVSPEDVEY
FNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYFCKWQGLPYSECSWEDGALISKKF
QARIDEYFLRNQSKTIPSKECKVLKQRPKFVALKKQPPYIGGSESLELRDYQLDGLNWLA
HSWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLSTLTSWQREIQIWA
PQMNAVVYLGDISSRNVIRTHEWMHMPTRRLKFNIILTTYEILLKDKSFLGGLSWAFIGV
DEAHRLKNDDSLLYKSLIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFCSWENFEE
EHGKGREYGYASLHRELEPFLIRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRN
YKALSKGSKGSTSGFLNVMMELKKCCNHCYLIKPPEEHEVFNKQELLQHLIRSSGKLILL
DKLLVRLRERGNRVLIFSQMVRMLDILAEYLKYRQFSFQRLDGSIKGELRKQALDHFNAE
GSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLV
TKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGATPSSSAPFNKEELAAILKFGA
EELFKEPEGEEVEPQEMDIDEILKRAETRENEGGPSTVGDELLSQFKVANFSAMEENDIV
DAEQNSDSKQWEDIIPQDQRERLEEEERQKELEEMYLLPRMRKCAKQNSFNGTEGRRSRN
RRYSGSDSDSLSDHKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGCPLERLDAIA
RDSELVDKSETDLRRLGELVHSGCIKALKDSSSGQERAGGRRGKVKGPTFRISGVQVNAK
LVISHEEELAPLHKSIPIDPDERKRYTMPCHTKAAHFEIDWSKEDDSNLLIGIYEYGYGS
WEMIKMDPDLNLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLIRKEAQRLSGSGNSK
RRKMRIKKNKMTKTIKMEEEIKNESTPPSSEKSDVEDCEQQEVKVADKIQAGEKGEGEVE
PELNIKDEPEEKEIIECENKNELKKDKKEKDDRKEVREKEAKEKLKDPSLKDKESKEEKL
SETKQENKEKTKRTILAETPVHITASSDPIPISEESEELDQKTFSVCKERMRPVKAALKQ
LDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPEHIKQWRKNLWIFVSKFTEFDA
RKLHKLYKHAIKKRQECQHGDQNIGNNMSGHVVRNPADVERLKENTNHDDSSRDSYSSDR
HLSQYDNHKDRHQGDAYNKCDSRKRPYSSFSNGKDHRDWDRDHHFKQENRYYSDSKHRKL
DDHRSRPHRSGHEGSLKDSRSYLDHRSHSDHRLLSDHRTSSDHRPGSDHRTSSDYIHHKS
SRDYRYHSDWQMDHRASSSDPRLPLEQRPPYGSRSPLGHRSPFEYSSDHKGTPDHIWSGR
KT
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcaaaagtgatgaagatggtgcgagtaacagcagtggagggtctagtcattca
gatgacactgggtctggttcaagctcagggagcagcagtgggagcagcagtcaatctgga
agcagtgactcgggtagtgactcagactctggaagccaatctgagtctgatacacctgga
gaaaagaaaccaatacaggctaagcctactcccatagatggcacagagttttggaaatcc
aatcccagtattttggccgttcaaagatctgccatactcaggaaacaacagcaacttcat
cagcagccacactctaaggcatcatctgatagtgagtcagaagaggactcatcctccaac
tctgaagacgtgtcatctaatggaaataaaaggaaaaaacataaagatgaggattggaat
atgtcaaggtccggttctgactcggagtcggatacaagctccagttcagattcagaagtg
gtaacaaatggacagaaaagcagctgtgagggaagtgaatcagattatcatccaagccac
aaggtcaaaagcaggaaacctccaaatagaattaaatcaaaacatgtgaaaacgtttggt
cagaaaaagaatcgaatggattcatctgacgaagatgaggattatgataagagaatatcg
cgtcgccaaacagtctcaaatatttgttacaaagaagatgaagagatgaagactgactct
gatgatttgctggtagtttgtggagcagatgttccacagcctgatgaggatgagtttgaa
acaattgaacgtgttatggaatctcgcattggacgcaaaggagctgtaggcgccacaacc
accatatatgcggtagaagccgatggtgatccaaatgcagattatgatgagagggaacca
ggagaaactcagtatcttataaagtggaaaggttggtcgagtatccacaacacatgggaa
acggaagaaacattaaatcagcaaaacgtaaaaggcatgaaaaaaatggaaaactttaag
aaaaaggaccaagagataaaacgatggttgaaaagtgtttccccagaagatgtagagtat
tttaactgccaacaagaactcacagatgacctacataaacagtatcaaatagtggagaga
ataattgctcattcaaatcagaagtctgcagctgggtatccagactatttttgcaaatgg
cagggtttgccgtactcggaatgcagttgggaggatggagcgcttatttccaagaagttc
caagctcgaatcgatgagtatttcttgaggaatcagtccaaaaccattccttcaaaggaa
tgtaaagtattgaagcagcgaccaaagtttgttgctctgaaaaaacaaccaccctacata
ggagggagtgaatctttagagctgagagactaccagttagatggtctgaactggcttgct
cactcttggtgcaaagggaacagttgtattcttgcagatgaaatgggtcttggaaaaaca
atacagacaatttcttttctgaactacttgtttaatgaacaccagctttatgggcctttc
cttctggttgtgccgctttctactctgacttcctggcaacgtgagattcagatttgggca
cctcagatgaatgctgtggtatacttaggagacatcagcagcagaaatgtgataagaacc
catgaatggatgcatatgccgaccaggcgcttaaaattcaatatcattttaacgacatat
gaaattttgttgaaggataagtcatttctgggcggacttagttgggcatttattggagta
gatgaagctcaccgtctgaagaatgatgattccttactgtacaagagtttaattgaattc
aagtccaaccatcggctgcttatcactgggactcctttgcagaactctctcaaggaactg
tggtctttactgcatttcatcatgccagaaaagttttgttcctgggaaaattttgaagaa
gaacatggaaaaggaagagagtatggttatgcaagtcttcacagggaacttgagccattc
ctaatacgaagagtcaagaaagacgtggaaaaatctctacctgctaaagtagaacaaatt
ttgagagtagagatgagtgcgctacagaaacagtattacaagtggatattaaccagaaac
tacaaagccttgagtaaaggttcaaagggcagtacctcagggtttttgaatgtcatgatg
gaactcaaaaagtgttgtaatcattgctacctcattaaaccaccagaagaacatgaagtg
tttaacaaacaggaattgttacagcatttaatccgtagcagcggtaaactcattcttctc
gacaaacttctggttcgtttgcgtgaaagaggcaacagagttcttatcttctctcagatg
gtgcgaatgcttgatattcttgcagagtatctgaagtaccgtcagttttctttccagaga
ttagatggttcgattaaaggggaactgaggaaacaagctctggatcattttaatgcagaa
ggttctgaggatttttgctttttgctgtctaccagagctggtggtctgggtataaatttg
gcatctgctgatactgttgtgattttcgattctgactggaacccccaaaatgacttgcaa
gcacaggctagagcacataggattggtcaaaagaaacaggttaatatttatcggctagta
acaaaaggatctgtggaggaggagatcattgaaagagcaaaaaaaaaaatggtacttgat
cacttagtaattcaaagaatggacacaacagggaagactgttttgcacacaggcgctact
ccttcaagctctgctcccttcaacaaagaagaattagcagctattttaaagtttggtgca
gaggaactatttaaagagccagaaggtgaagaagtggaaccacaagaaatggatatagat
gaaatattgaagagagcagaaacacgtgaaaatgaaggcggtccatcaaccgtaggagac
gaattgctttctcagtttaaggtggctaacttttctgctatggaagaaaacgacattgta
gatgcagaacaaaattctgattcgaagcagtgggaggacataattccacaagatcagcgt
gaacgcctagaagaagaggaacgacagaaggaacttgaagaaatgtacctgcttccacga
atgaggaaatgtgctaagcagaacagcttcaatggcactgaagggagacgcagtaggaat
cgaagatactctggatctgatagtgattccctgtcagatcacaagcggccaaaaaaacgc
ggaagaccacggacaatcccacgtgaaaacattaaaggatttagtgatgctgaaattcgg
aggtttatcaaaagctacaaaaaatttggctgtcctcttgaaagattagatgctattgct
agagattctgaattggttgataaatcggagactgacctccgacggctaggggagttagtt
cacagtggttgtattaaagcactgaaagacagttcttcgggacaagaaagagcaggtgga
agacgtggaaaagtaaaagggccaacattccgaatctctggagttcaagtgaacgcaaag
cttgtcatctctcatgaagaggagcttgcacctttgcataaatccattccaatagatcca
gatgaaagaaaaagatacacaatgccatgtcacacaaaagcagcccattttgaaattgac
tggtcaaaagaagatgattcaaatcttttaataggcatttatgaatatggctatggcagc
tgggaaatgattaaaatggacccagacctcaacttaacacagaagatcttaccggatgat
cctgataaaaaaccacaagccaaacagctgcaaactagagctgactacctcatcaagtta
cttaataaagaccttataaggaaagaagcacaacggctttccggctcaggaaactcgaag
aggagaaaaatgagaattaagaaaaacaaaatgaccaaaacaataaaaatggaagaggag
ataaaaaatgagtctactccaccttcctcagaaaagtctgatgttgaagactgtgaacag
caggaggtaaaagtagcagataagatacaagcgggtgaaaaaggggagggtgaagtggag
ccggaattgaatattaaggacgaacctgaagaaaaagaaattattgaatgtgaaaataag
aatgaattaaaaaaggataaaaaggaaaaggacgacagaaaagaagtgagggaaaaggag
gcaaaagaaaaattaaaagatccatctttaaaagacaaagagagcaaagaagagaagcta
agtgagactaaacaagaaaacaaagaaaaaacaaaaaggaccatccttgctgaaacacca
gtccatatcacagccagtagcgatcctattcctatctcagaagaatctgaagaacttgac
cagaaaacgttcagtgtttgtaaagagagaatgaggcctgttaaggcagcactgaaacaa
ttggatcgaccagagaaaggtctgtccgagagagaacaactggagcacactcggcagtgc
ttgattaagattggtgatcatataacagaatgcctgaaagagtactctaaccctgaacat
attaaacaatggagaaaaaacttgtggatttttgtatcaaagttcacagaatttgatgca
agaaaactgcataagctctataagcatgcaatcaaaaaacgtcaggagtgtcagcatggt
gatcagaacattggcaataatatgagtggccatgtcgtccgaaatccagcagatgttgaa
aggttgaaagaaaatacaaaccatgatgacagcagcagagacagttattcatctgacaga
catttatcacagtatgataaccacaaagaccgacatcaaggtgatgcttacaacaaatgt
gactcaaggaaaagaccatattcctccttcagcaatggcaaagatcacagggattgggat
agggatcatcactttaaacaggaaaacagatactacagtgacagtaaacaccgcaaacta
gatgatcacaggagtagaccacacagatcaggccatgaaggaagcttgaaagactccaga
tcctatcttgatcaccgttcccattcagaccatcgattactgtcagatcaccgaaccagc
tctgaccatcgacccggctctgaccatcgaaccagctctgattacattcatcataaatct
tcccgggattatcggtaccactcagattggcagatggaccacagagcatctagcagtgac
cctagattacctctggagcagagaccaccttatggctcacgatctcccttggggcacaga
tcaccatttgaatactcatctgatcataaaggtacaccagaccatatatggagtggccgc
aaaacataa
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integrated database retrieval system
