Pleurodeles waltl (Iberian ribbed newt): 138285886
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Entry
138285886 CDS
T10800
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138285886 (VPS53)
Membrane trafficking [BR:
pwl04131
]
Protein recycling
Others
EARP complex
138285886 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
138285886 (VPS53)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
HAUS1
FBF1
IFT74
Sec8_N
COG4_N
Syndetin_C
GrpE
TPR_CAND1
COG5_N
COG3_N
GbsR_C
NBD94
Tropomyosin
Dor1
Motif
Other DBs
NCBI-GeneID:
138285886
NCBI-ProteinID:
XP_069082481
LinkDB
All DBs
Position
3_1:1979692011..1980385930
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AA seq
829 aa
AA seq
DB search
MEEEELQVVDELEAVLHLSPEVQQAIEQVFPSQDALDRADFNAVEYINSLFPTEQSLANI
DDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFQKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPAQGTKRPGGPSNVLRDA
CLVANVLDARIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPAEWCMTERIAVEFCTITRTDLAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGSTLMDSALKKPEPTPVSTNPFLEDETGTEESALDQDADLDRPKKPKAPENPFHGILS
KCFEPHLYVYIESQDKNLGELIDRFIADFKSQGPPRSNTDEGGAVLPSCADLFVYYKKCM
VQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSSSGGLTITSLLKEKEGSEAA
KFTTDELCLICSILSTAEYCLATTQQLEEKLKEKVDVTLMERINLTGEMDTFSTVISNSI
QLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSIVLHIKQNVPIIRDNLASTRKY
FTQFCIKFANSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPSIVFVDNYIKLLVDCNTETFQKILDMKGLKRSE
QSSMLDLFRQRLPAPPAGMDNTNSLSLSAPTPEQESSRIRKLEKLIKRL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaagagttgcaggtggtcgatgagctggaggctgtgctgcatcttagccct
gaggtgcagcaggccattgagcaggtttttcccagccaggatgccctagatagggcagat
ttcaatgcagtggagtatatcaattcactttttcccacagaacaatctttggcaaacatc
gacgacgttgtgaacaaaattagattgaaaataaggcggctggatgacaacatccgaaca
gtggtgagaggtcagactaacgtgggacaggatggaaggcaggctttggaggaggcacag
aaagctatccaacagctctttggtaaaattaaggatattaaggacaaggcggaaaagtct
gaacaaatggttaaagaaatcacccgggatattaagcagttggatcatgccaagcgtcac
ctgaccacgtctatcacaacactgaatcaccttcatatgctggcaggaggagtcgactca
ttggaggcaatgacgaggaggcggcagtacggagaagtggctaaccttcttcaaggcgtg
gtgaacgtgctggagcactttcagaagtacatgggcattcctcagatcagacagctctcc
gagagagtgaaggcggcacagactgagttgggacaacagatattggctgattttgaagaa
gctttcccagcccaaggcaccaagaggcctggtggacccagcaatgtcctgcgggatgct
tgtcttgtcgctaatgttttagatgccagaattaaacaagaaattatcaagaagtttatt
cgacaacatctctcggagtatttggttttgtttcaagagaatcaagacgtggcctggctg
gataaaattgacaggcggtatgcctggatcaagcgtcagctggtggactatgaagagaag
tatggccgcatgtttccggcagagtggtgcatgactgaaagaatcgctgttgagttctgc
accattacaaggacagaccttgcaaagatcatgcgcacgagggccaaggaaattgaagtg
aaattgctactctttgccattcagaggacaaccaactttgaagggctgttggccaagcgc
ttttcgggcagtactttaatggacagtgcattgaaaaagcctgagcccactcctgtttca
acaaacccattcctggaggatgagacggggaccgaagaatctgctttggaccaggatgca
gatttagacagaccaaagaagccgaaagcccccgagaacccgttccacggtatcctctcc
aagtgcttcgagcctcatctttacgtgtatatcgagtcacaggacaagaatcttggtgag
ctcattgatagattcattgctgatttcaagtctcagggcccccccagatctaatacggat
gaaggtggagccgtcctaccaagctgcgccgacctcttcgtgtactacaagaagtgcatg
gtgcagtgctcgcagctcagcactggggagcccatgatcgccctcaccaccatctttcag
aagtacctgcgtgaatacgcctggaaaatactctctggaaacctgcccaaaacgagtagc
agcagtgggggactaaccatcacaagcctcctgaaggagaaagagggctctgaggctgcc
aagtttacaacggatgaactgtgtctgatctgcagcatcctcagcactgccgagtactgc
ttggcaacaacccaacagcttgaagagaaactgaaggaaaaagtggacgttacactgatg
gaaagaatcaatctgactggagaaatggacacctttagcacagtgatctcaaacagcatc
cagctcctagtgcaagacctggacgccgcatgtgatcctgcgctcaccgccatgagcaag
atgcagtggcaaaacgttgagcatgttggtgaccaaagtccctatgtcacttccatcgtg
cttcacatcaagcagaatgtgccgatcatccgggacaatctggcctctactaggaagtac
ttcacgcagttctgcatcaagtttgccaactccttcattcccaaattcatcaaccatctg
ttcagatgcaaacctatcagtatggtgggggcggagcagctgcttctggacacacactct
ctgaaaactgtattgctcgatcttccatccatcgggtcccaagtggtgagaaaggccccc
gccagctacacaaagatcgtagtgaaaggaatgactcgtgctgaaatgatcttaaaggtt
gtgatggccccccatgagccctccattgtgtttgtcgacaactacatcaagctgctagta
gattgcaacacagaaacattccagaaaattcttgacatgaagggtctcaagagaagtgaa
caaagcagcatgttggacctgtttcgccagaggctgcctgctcctcctgctgggatggat
aacaccaactccctgtccctctctgcacccacccctgagcaagaatcttcgcgaatacga
aaactggagaagctgattaaaagactgtaa
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