Pleurodeles waltl (Iberian ribbed newt): 138285892
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Entry
138285892 CDS
T10800
Name
(RefSeq) pinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pwl04030
]
138285892
G protein-coupled receptors [BR:
pwl04030
]
Rhodopsin family
Vision
Opsin
138285892
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srh
Motif
Other DBs
NCBI-GeneID:
138285892
NCBI-ProteinID:
XP_069082497
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Position
3_1:1984813460..1984929369
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AA seq
353 aa
AA seq
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MHFPNFSLDSRENGTPGPFDGPQWPHMAPRSVFMSIATLMGVVVVSASFVNGLVIVVSIR
YKKLRSPLNYILVNLAVADLLVTFFGSSISFSNNIQGFFVLGKTFCEFEGFMVSLTGIVG
LWSLAILALERYIVICKPMGDFRFQQKHAVTGCAFTWVWSLIWTAPPLFGWSSYVPEGLG
TSCGPNWYTGGSNNNSYIMALFITCFAMPLSMIIFSYASLLMTLRAVAAQQKESETTQRA
EREVTRMVIAMVMAFLICWLPYATFAMVVATNKDIVIQPALASMPSYFSKTATVYNPVIY
VFMNKQFRNCLLALMCCGRNPCGGEEDGSATVASARTDVTSVSEGGGNKVTPA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcactttccgaacttttctctagactcgagagaaaatggcacccccgggccattcgat
ggcccccagtggccacacatggctccccgcagtgtcttcatgtccattgcaaccctgatg
ggcgtagttgtggtttctgcttcttttgtgaatgggctggtaattgtagtgtcaatccgg
tacaagaagctgaggtcgccgctcaactacatcctggtgaacctagccgtggccgaccta
ctggtcacgttcttcggcagcagcatcagcttctccaacaacatccagggcttctttgtg
cttggaaagaccttctgtgagtttgagggcttcatggtctccttaacaggtatcgtggga
ctttggtctctagccatcctggccctcgagaggtacattgtgatctgtaaaccaatgggg
gacttccgtttccagcagaagcatgctgtaacaggctgtgcctttacttgggtttggtct
ctcatctggacggcgccacctctctttgggtggagcagctacgtgcctgaagggctgggg
acgtcctgtgggccaaactggtacactggaggcagcaacaataacagctacatcatggct
ttgttcatcacctgcttcgccatgcctctaagcatgatcatcttctcctatgccagccta
ctgatgacactgcgtgctgttgcagcacaacaaaaagaatctgagacgactcagcgtgca
gagcgggaggtgacaaggatggtgattgccatggtgatggcgttcctgatctgctggtta
ccctatgccacgtttgctatggtggtagctacgaataaagacatagtcatccagccagca
ctggcgtcaatgccctcgtacttctctaaaacagccactgtctacaaccccgtcatctat
gtcttcatgaacaaacagttccgtaactgcctgctggcgctgatgtgctgcggccgcaac
ccctgcggaggagaggaggacgggagcgccaccgtggccagcgcgcgcacggacgtcact
tcagtctccgagggaggcgggaataaggtcacgccagcgtga
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