Pleurodeles waltl (Iberian ribbed newt): 138285905
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Entry
138285905 CDS
T10800
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04142
Lysosome
pwl04144
Endocytosis
pwl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138285905 (CLTC)
04142 Lysosome
138285905 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138285905 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138285905 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwl04147
]
138285905 (CLTC)
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
138285905 (CLTC)
Exosome [BR:
pwl04147
]
Exosomal proteins
Proteins found in most exosomes
138285905 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
138285905
NCBI-ProteinID:
XP_069082526
LinkDB
All DBs
Position
3_1:1995244882..1995968473
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPSNIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPTT
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPIKTFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKHNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHSRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLLE
EKRECFAACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMREYLSKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAAFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattttgcccattcgcttccaggaacacctgcagctccagaaccttggtata
aacccatcgaacattggctttagcaccctgaccatggaatccgacaaattcatctgcatt
cgagagaaagtgggagaacaagcacaggtggtaataattgatatgaatgatcccactacc
cctattagaaggcctatatcagctgatagtgccatcatgaaccccgccagcaaagtcatt
gcactaaaagccgggaaaacgcttcaaatttttaacattgaaatgaaaagcaaaatgaag
gcccataccatgactgatgatgtcactttttggaagtggatctcacttaacaccgtggcc
ctagtcactgacaatgcagtgtatcattggagcatggagggagagtcgcagcccatcaaa
accttcgaccgacattccagcctggccgggtgccagatcattaactaccgtaccgatgcc
aagcagaaatggttacttttaactggcatatctgcccagcaaaaccgcgttgtgggcgcc
atgcagctctattctgtagatcgaaaagtgtctcagcccatcgagggtcatgccgcaagc
tttgcgcagttcaagatggaaggcaatgcagaagaatcaactctgttctgttttgctgtg
cgaggacaggcaggaggcaagttgcatataattgaagttggcactccacctacaggaaac
cagccattccctaagaaagcagtggatgtgttctttcccccagaggcacagaatgatttc
cccgttgctatgcagataagtgaaaagcacgatgtggtattcctgattaccaagtatggc
tacatccacctgtacgacttggaaacgggaacttgcatctacatgaacagaataagtgga
gaaaccatctttgtcactgcaccccatgaagccacagcaggaatcattggtgtgaataga
aaaggacaggtgctgtcggtctgtgtcgaagaagagaatatcatcccatacatcaccaat
gttctacaaaaccctgacctggctttacgcatggctgtccgcaataaccttgcaggggca
gaggagctttttgccagaaaattcaatgctctatttgcccagggaaactattctgaagcg
gctaaagtagctgcaaatgcaccaaagggaattctccgtacaccagacacaattcgccga
ttccagagtgttcctgcacaacctggccaaacatctcccttgctgcagtacttcggaatt
ctcctcgaccagggccagttgaacaagtatgagtctttggaactatgccggcctgtgcta
cagcaaggtcgtaaacagctgctggaaaaatggctgaaagaagataagctggagtgctca
gaagaattgggtgatcttgtgaagtctgtggatcccacactggccctcagtgtttatctg
agggccaatgttcccaataaagtcatccaatgttttgcagaaacgggacaagtccagaag
attgtgctgtatgccaagaaagtgggatacacaccagactggattttccttctcaggaat
gtgatgagaatcagcccagatcaaggacagcagtttgctcagatgttggttcaggatgag
gaacccctggctgatatcacacaaattgttgatgtattcatggagtacaacctcattcag
cagtgcactgcctttttattggatgctttgaaacataataggccctcagagggcccactg
cagacacgcttgcttgagatgaacctcatgcatgctccccaggtagcagatgccattttg
ggaaatcagatgttcacgcactatgaccgtgctcatattgcccagctgtgtgagaaggct
ggtctgctgcagcgtgccttggaacacttcaccgacctatatgacattaaacgagctgta
gttcacacacatcttcttaaccctgagtggttagtgaattattttggttcactgtctgtt
gaggactctctggagtgtttgcgagctatgctttctgcaaatattcgccagaaccttcaa
atctgtgtccaggtggcttcaaaataccatgagcaactctccactcagtcactgatcgag
ctgtttgagtctttcaagagttttgaaggtctgttttatttcttgggatccattgtaaac
ttcagccaggaccctgatgtacactttaaatacatccaagctgcctgcaagaccggacaa
attaaggaggtggaacgtatttgcagagaaagcaattgctacgatcctgagcgtgtgaag
aatttcctgaaggaagctaaactaacagaccagctccctctgattatcgtgtgtgatcgc
tttgactttgtccatgacctggtgctgtatttgtaccgaaacaaccttcaaaagtacatt
gaaatttatgttcagaaggtcaacccaagtcgtctgccagtggtgattgggggattgctt
gatgtggactgttctgaagatgtcattaaaagcctaattcttgttgtgcggggtcagttc
tccacggatgagcttgttgctgaagtagaaaaaagaaacaggttaaaactgcttctgcct
tggttggagtcaagaatccatgagggctgtgaggaacctgctacccataatgccctggca
aagatctacattgatagcaacaacaacccagagagatttttgcgggagaatccttattat
gacagtcgcgttgttgggaagtactgcgagaagagagacccccacctggcatgtgtggct
tatgagcgaggccagtgcgacctggagcttattaatgtatgcaatgaaaattcattattc
aagagcttgtcgcgttacttagttcgtcgcaaagacccagagttgtgggccagtgttctc
ctggaaagcaatccatacagaagacctctcatagatcaggttgtacaaactgctctctct
gaaacccaggaccctgaggaagtgtctgttacagtgaaagcctttatgactgcagatctg
cccaatgaactcatagaacttctggagaaaatagtcctggacaactctgtcttcagtgag
cataggaatctgcagaatcttctcattctcacagccattaaggctgaccggactcgtgtc
atggagtacatcaatcgtctggataattatgatgcccctgacattgccaatatcgccatc
agtaacgagctgtttgaggaggcttttgctatcttcaggaaatttgatgttaatacctct
gctgtgcaggtacttattgagcacattggaaacttggatcgagcatacgaatttgccgag
cgctgcaatgaacctgctgtctggagtcagttagccaaagcgcagctgcagaagggtatg
gtgaaagaagccattgactcatatatcaaagcagatgatccttcatcctacatggaggtg
gttcaggctgccaataccagtggaaactgggaagagttggtgaaatacctgcagatggca
cggaaaaaggccagagaatcatatgtagaaactgaattaatctttgctcttgcaaagaca
aacaggcttgcagagctggaagaatttatcaatggcccaaacaatgcccacattcaacaa
gttggtgatcgctgctatgatgagaaaatgtatgatgctgcaaagctgctatacaacaat
gtttccaactttgggcgcttggcttccacactggtgcatctcggagaataccaagctgct
gtagacggagcccggaaagccaacagcacccgcacatggaaagaggtctgttttgcttgt
gtcgatggcaaagagttccgtctggcccagatgtgtggtctccatattgtggtgcatgca
gatgaactggaggaacttattaactattatcaggatcggggttactttgaggagctaata
acaatgttggaagcagccctgggacttgaacgtgcccatatgggaatgtttacagaactg
gctatcctctattccaaattcaaaccacagaaaatgagggaacacctggagctgttttgg
tctagagtgaatattcccaaggttctacgagcagcagaacaagctcatctctgggctgag
ctggtgtttctgtatgacaagtacgaagagtatgacaatgccattatcaccatgatgaat
catccaacagatgcatggaaagaaggacagtttaaagatatcatcaccaaggtggccaat
gttgagctgtattatagggcaattcagttttacctggaattcaaacctctgttactcaat
gatcttcttatggtgctctcccctcgattggatcacagccgtgcagtcaactacttcagt
aaggttaagcagctgccattggttaaaccatacttgcgatcagtccagaaccacaacaac
aaatctgttaatgagtctctcaataatctcttcataactgaagaagattaccaggctctt
cgcacatccatagatgcgtatgataactttgacaacatctccctggctcaacgtttggag
aaacatgaattgattgaatttcgaagaattgcagcataccttttcaaaggcaacaatcgc
tggaaacagagtgtggaactctgtaagaaagatcgactatataaggatgctatgcaatac
gcatctgagtcgaaggacaccgaactcgcagaggaactactacaatggtttttgctggaa
gagaagagagaatgttttgcagcatgtctctttacgtgttacgatcttctccgacctgat
gttgtcttggaaactgcatggaggcacaatatcatggactttgcaatgccctatttcatt
caggttatgagagagtacttgtccaaggttgatgcaataaaggaaaaggtggataagctc
gatgcctctgaatcactaaggaaagaggaggagcaagcaacagagacgcaacccattgtc
tacggccagccacagctgatgctgacagcaggtcccagtgttgcagtccccccacaggca
gctttcggctatggatacactgcacccccctatgggcagcctcagcctggctttggctac
agcatgtga
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integrated database retrieval system
