Pleurodeles waltl (Iberian ribbed newt): 138285922
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Entry
138285922 CDS
T10800
Symbol
WDR36
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138285922 (WDR36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwl03009
]
138285922 (WDR36)
Ribosome biogenesis [BR:
pwl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
138285922 (WDR36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_SCAP
WD40_RFWD3
Utp12
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_LRRK2
Sterile
NBCH_WD40
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
138285922
NCBI-ProteinID:
XP_069082559
LinkDB
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Position
1_1:614719177..615262467
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AA seq
905 aa
AA seq
DB search
MAESDEGTPVQQQKTASRGSTIFQGFRALGLYSNHLPHVVRYHRRHREFYLVTSVGRAFH
TFNVNKLGIVAVSNAVSQDITCLAADRMLVFASHGTLLQAFARNKEVVHTYVGHNAEIHL
LQPFGDHVISVDKDNILIIWDVQSEEEYLQLNFDMNVFAVSAVMHPSTYVNKILLGSRQG
SLQLWNVKSNKLLFTFQGWESGVTVLQQAPAVDVVAVGLVSGEIIVHNIKFDETLMKFQQ
DWGPITAITFRTDGHPVMAAGSPVGHIGLWNLEEKRLIIQMRDAHSSAIAGMTFVHGEPL
LVTNGADNAIRVWIFDGPGGEGRLLRLRMGHSAPPTKIRYHGHNGEQILSAGQDSTLQSF
STVHERYNKSLGRGSINKKKSKKKGLQFDTLKLPPIITFASETARQSDWDGIIACHQGYL
TCTTWNYQKTSMGVHKFRPERFHKNIPLHVYATAVDLTSCGNFVLIGLSTGEVDMYNIQS
GIHRGHFGSDKAHKGAVRGIAVDGLNQLTVTAGSDGLIKCWKFKAKDLVHVTELSSPPSV
ILLHRDSGMLGIACDDFCICVFDVETRKVVRKFSGHQGKINDMAFSPDGRWLITASMDCC
IKVWDLPSGCLIDCFLLDSAAVSITMSPTGDFLASSHVDDLGIYLWSNTSLFRLVSLRPL
PADYQPSVVMLPGTCPVQDVITTDDVDEAPDEMIEYDSPEQLEEQLVTLSSLPESRWKNL
LDLDMIKKRNKPKEPPKVPKSAPFFIPTIPGLVPRFAATEQENTQQSKVVNLGILAQKSS
FYIQLEEALANQTYDSPVKTLKEMGPSSIDSELRSLAPGDGGSVKVMQSFLQMVGSMLDS
NRDFELAQAYLALFLKLHLRTISSEPTLLDELSKLSSKIETTWTHLQTLFNQSLCVLNYM
KSALL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtctgatgagggtacgcctgtccagcagcaaaagaccgcgagccgcggcagc
actatcttccagggattccgtgctcttgggctctactcaaatcacctgccgcatgtggta
cgctaccaccgtagacatcgcgagttctacctggtgaccagcgtcggacgagccttccat
accttcaatgtgaacaaacttgggatagtagcagtgagcaatgctgtttctcaagatatc
acttgcttggctgctgatagaatgttggtgtttgcatcacatgggacacttctccaggca
tttgcccgcaacaaagaggttgttcatacatatgtaggccacaatgctgaaatccacctt
ctgcaaccatttggtgatcatgtgatttctgtggacaaggataacatactcatcatttgg
gatgtccagtctgaagaagaatacctacagttaaactttgatatgaatgttttcgctgta
tctgctgttatgcacccaagcacctatgtgaacaaaattttgcttggcagtcgtcaggga
agcctacaactgtggaatgttaagtccaacaaactattattcacattccaaggatgggag
tctggtgtcacggtccttcaacaggctccagcagtggatgttgtagcagtaggcctggtt
tcaggtgaaattattgtacacaatatcaagtttgatgaaaccttgatgaaatttcagcaa
gactggggacccatcacagcaattaccttccgcacagatggacacccagtgatggcagct
ggaagccctgttggacatattggattatggaatttagaagagaagagattgataattcag
atgagagatgcacattcttcagccattgctggaatgacattcgtccacggagaaccactt
cttgttacaaatggagcagataatgctataagggtttggatatttgatggtcctggaggc
gaagggcgattattgagattacgcatggggcacagcgccccccctacaaagatcagatac
cacgggcacaatggagagcaaatacttagtgctggtcaagatagcaccctgcagtccttc
tccactgtgcatgaaaggtacaataagagcttgggacgtggctctatcaataaaaagaaa
tcaaaaaagaaaggacttcagtttgacaccttaaaactccctccaattattacctttgcc
tcggaaactgcaaggcagagtgactgggatggcatcattgcgtgtcatcaaggttatctt
acctgtacaacatggaactaccagaaaacatccatgggggtgcataaatttagaccagaa
aggtttcacaaaaacattcctcttcatgtgtatgcaacggcagttgatttaacgagttgt
gggaactttgtcttaattggactttcaactggagaagtagacatgtacaatattcagtct
ggcattcacagaggacacttcggaagtgacaaagctcacaagggtgcagtcagaggtata
gctgtggatggcttaaaccagttgactgtcacagctggtagtgatggactcattaaatgc
tggaagttcaaggcgaaagatttagtgcatgtcactgaacttagttcaccaccttctgtt
attcttctgcacagagacagtggtatgctgggaattgcttgtgatgatttctgcatttgt
gttttcgatgtggaaacaagaaaggttgtcagaaagttttctggccatcaaggaaaaatc
aatgacatggctttcagtcccgatggtcgatggttaataactgcatcaatggattgctgc
attaaagtgtgggatcttccatcagggtgcctgatagactgttttctgttggattcagcg
gctgtctctatcaccatgtcccctactggagatttcttagcctcctcccacgttgatgat
cttgggatttatctttggtcaaatacttctctatttcgccttgtttcattacgaccactg
cctgcagattatcaaccttctgtggtgatgcttcctggaacatgtcctgtacaagatgtg
ataactactgatgatgtagacgaagcacctgatgaaatgattgaatatgattctcctgag
cagctggaagaacaactagtgacgttgtcttcattgccagagtcaaggtggaagaatctc
ctggatcttgatatgattaagaaaaggaacaaaccaaaggaacctccaaaagtgcccaaa
tctgcacctttcttcatcccaacaattcctggcctggtaccgagattcgctgcgacagaa
caagaaaacacacagcagtcaaaggtcgtcaatcttggaattcttgcccaaaaatccagt
ttttacatccagcttgaagaagccctggcaaatcagacatacgactctcctgtaaaaaca
ttgaaagaaatggggccatctagcatcgattcagagctgcgcagtttggctccaggcgac
gggggctctgtgaaggtgatgcaaagttttctgcaaatggttgggagcatgctggattca
aatcgggattttgagctggctcaggcataccttgcattgttcttgaagttgcatttgaga
accatatcgtcggaaccaacgcttttagatgaactctccaaactgtcttcaaaaatagag
accacgtggacccacctacagactcttttcaatcaaagtctttgtgtattaaattacatg
aaaagtgctttgttataa
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