Pleurodeles waltl (Iberian ribbed newt): 138286386
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Entry
138286386 CDS
T10800
Symbol
LHX1
Name
(RefSeq) LIM/homeobox protein Lhx1 isoform X1
KO
K09372
LIM homeobox protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138286386 (LHX1)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
138286386 (LHX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
138286386
NCBI-ProteinID:
XP_069082664
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Position
3_2:10555443..10597453
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AA seq
409 aa
AA seq
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MVHCAACERPILDRFLLNVLDRAWHVKCVQCCECQCNLTEKCFSREGKLYCKNDFFRRFG
TKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCHKQLSTGEELYIIDENKFVCKEDYLS
TNGVAKEAGLLSGKSPVTGSDPSLSPDSQDPSLDDAKDSESANISDKETGSTENDDQNLG
AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR
MKQLSALGARRHAFFRSPRRMRPLVDRLEPGELIPNGPFSFYGDYQSDYYGPGSNYDFFP
QGPPSSQAQTPVDLPFVPSSGPAGTPLGGMDHPLPGHHPSSDAQRYTDIMSHPPGDSPSP
EPNLPGSLHSMSAEVFGPSPPFSSLSVNGGGSYASHLSHASEMNETAVW
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggtgcactgcgcggcgtgcgaacggcccatcctggaccgcttcctgctgaacgtgttg
gacagggcttggcacgtgaagtgtgtgcagtgctgcgagtgccagtgcaacctgaccgag
aagtgcttctcaagggagggcaaactctactgcaagaacgacttcttccggcgctttggg
accaagtgtgcgggctgcgcgcagggcatctcccccagcgacctggtgaggagagcgcga
agcaaggtgttccacctcaactgcttcacctgcatgatgtgccacaagcagctgtccacg
ggcgaggagctatacatcatcgacgagaacaagttcgtgtgcaaggaggactacctgagc
actaacggtgtagccaaggaggccggcctgctgtcaggtaaatccccagtgacaggcagt
gaccctagtttgtctcctgactcccaagacccgtctcttgacgacgccaaggactcggag
agcgccaacatctcggacaaggagaccggaagcaccgagaacgacgaccagaacctgggg
gccaagcggcgggggccccgcaccaccatcaaggccaagcagctggagaccctcaaagcg
gccttcgcggctacccccaaacccacccgccacatccgggagcagctggcgcaggagacc
ggcctcaacatgagggtcatacaggtgtggttccagaatcgacgctccaaggagaggcgg
atgaagcagcttagtgctctgggggcacgcagacatgcttttttcaggagtccccgcaga
atgaggcccctagtggatcgactggagcccggggagctcatacccaatgggcccttctcc
ttttatggagattatcaaagtgactactatggcccaggaagcaactatgacttcttccct
caaggtcccccttcctcccaagcccagacaccagtggacctcccttttgtgccctcctcc
ggaccagcggggaccccactaggtggcatggaccaccctttacctggacaccacccttcc
agtgatgcacagcgatataccgacatcatgtctcacccccctggggactctccgagtcct
gaacccaacctgccaggctctttgcactccatgtcggctgaggtgttcggcccaagcccc
cccttctcctcgctctctgtgaatggcgggggcagctacgccagccacttgtcacacgct
tcagagatgaatgagactgctgtatggtag
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