Pleurodeles waltl (Iberian ribbed newt): 138286477
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Entry
138286477 CDS
T10800
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138286477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138286477
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138286477
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
138286477
NCBI-ProteinID:
XP_069082873
LinkDB
All DBs
Position
3_2:70976660..71090842
Genome browser
AA seq
1109 aa
AA seq
DB search
MVPAAGRHSATLVLVRHRARGAAWAALLLLGAGLLLPTWAVLPLLLLAGGAWCLHSGPPG
LFLLPEPPPKPCANGGPSPSPRAMLMGSYLGHPEGGAEGARGQQHRLREALHRPNPAVPS
PQRRLSYGEPSSMNRFALTPRRRYPIQQTQYAMTGAMPTVRWDGYQRKNVLTAKNSTVVH
SPVTVKIAPPDSKIARSPIFNHLTSPVLKSVTNVSPDPCARETVLNALKASRKRVVEEDI
THLDGQENKRRRHDSSGSGQSAFESLVANGSLASLVPKPGILKRTLNSQSTDDNHSKRSR
TSSVGSANNTGTAGIQSSVRNAITSSYSSSRGLVKTSRSGPSTSPLSSPSSSRSQTPERP
AKKTREDALQQSNASTPKSDGKELQTGKDLPILVEKPNSMNVFTSPSSDGKRKRKMQLLA
LRRRDPLIMPPPPQLGYSVTAEDLDAEKKAALQYINKALEEEPSAPSSSSTTETMTSRLS
LAFTVETSATTASSVGANKSLEISKEMQKPAATTEPAIAAVPAAASAPIFSVVSSAFPKT
QSESKPVATWSVSSNFGELSSGAQSSATSQTTVSVAMPAVSSPSRSTELSKPSPLMRLLL
EKPSEESVSAPQPTGITETPTFKPVFGTQPKVDSTTSSASTCTVAPSTATFKPIFGNLTN
PAPVSASSSAPFSFGQSIGTAVTSAQTAVPTASSSIFTELAKSASSTTASSTAGSFAEPG
PKPSFAFGLQAAANVPSSTVATTAVQPFQFTVAASNTTTTTAAGAFGTNSIFQFSKPTSS
TGTVSATSAQPVVTTFGQAPSVTAPVASGFIFGGGPATVSTTANTSQPTTFGSSASFFSS
GSSSFTMNPNPSYTTGQTAHPSTTKPANMTFGSTPSPFNFGSSTQQPAQPAFAGTNQPAF
GANSQTSFGTAGNTQLSFGAAKPVLSLGQSTSIPAPGFGSGMPQTTSGSVFGSAAQPQFG
FPTSSQPGNTSSAFGLGTHSTSTAPSVSGFNFGSGQNAAPTNTSVFGSAPMASSVMSTPN
HNATFAFGSTNTSENRLTFGGSSTPTFGQSSTAASSNQSFATPGTPAMGFSTPGPSFGSP
APAFSIGAGSKTSGARQRLQARRQHTRKK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggttcctgcagccgggcgccacagcgcgaccttggtgctcgtgaggcaccgcgcgcgg
ggggctgcctgggccgctcttctgttactcggggctgggctgttgttgcccacctgggca
gtgttgccacttctgctgcttgccggcggcgcttggtgcctgcacagtgggcctccgggg
ctgttcctactcccggaacccccgcccaaaccttgtgcaaacggcggcccttccccctct
cctcgcgccatgcttatgggcagctatctaggccaccccgagggaggcgctgagggagcc
cggggtcagcagcaccgtttgcgagaggctttacacaggccgaaccccgccgtaccaagc
ccgcagaggaggcttagttacggagagccctcaagcatgaaccgctttgctctgacccct
cgacggcggtatcctattcaacagacgcagtatgcaatgactggggcaatgcccacggta
cgctgggatggctaccaacgcaagaacgtgttaactgcaaaaaactcaacagttgtgcac
agtcctgttacagtgaagattgctccaccagacagcaagattgcccgctctcccatcttt
aaccatttgacttctcctgtacttaaatccgtgacaaacgtctcaccagacccatgtgca
agagagactgtgcttaatgccctaaaagcaagtcgaaagagggttgtggaagaggacata
acacatttagatggccaggaaaacaaacggaggcggcatgacagcagtggcagtggacag
tcggcattcgaatccctggtggcaaatggctcgcttgcttccctggtaccaaaaccaggc
atactgaaaaggactctgaactctcaaagcactgatgataaccacagtaagaggtcccgc
acttcatcagtcggctctgcgaacaacactggcacagctgggatacaatcatctgtgcgg
aatgcaatcactagctcttatagctcttctcgtggccttgtaaagacctcgagaagtggg
ccaagtacatcaccgttgtccagtccttcatcttcccggtcgcagacaccagagcggccc
gccaagaaaaccagggaagatgcattgcagcagtcaaatgctagtactccaaagtcggat
ggaaaggagctgcaaactggaaaagacctgccaatccttgtggagaagccaaattctatg
aatgtgtttacctctcccagcagtgatgggaaacggaagcgtaagatgcagctcctggct
ttgagacgcagggatccactgatcatgccaccccctccacagctgggctacagtgtaact
gcagaagacctcgatgctgagaaaaaagcagcattgcaatacattaataaagccttggag
gaagaaccaagtgcaccttcttccagcagtaccacagaaacgatgacaagcagactatct
cttgcctttactgttgaaactagtgcgactactgcatcttcagttggagcaaataaatca
ttggaaatttcgaaagagatgcagaagccagctgctactacagaaccagccattgctgcg
gttccagcagctgcatctgctcccatcttttctgtggtttccagtgccttccccaaaaca
caatctgaatccaaacctgtggctacttggagtgtatcttctaattttggagagttatcc
tctggggcacagtctagtgctacctctcaaaccactgtctctgtggctatgccagctgtc
agcagcccctctaggagtacagaactatcaaagccttctcctctgatgaggctcttgctg
gagaagccaagtgaagaatctgtcagtgctccacaacccactggcatcactgaaacgccc
actttcaaaccagtatttgggacacagccaaaagtggatagcaccacctcatctgcaagc
acgtgcacagtagcgccaagcactgccactttcaaaccaatctttgggaatttaaccaac
cctgcccctgtttcagctagctctagtgctcctttctccttcggtcagagtattggtact
gcagtcacttcagctcagactgcagttcccacagcttccagctccatattcacagagctt
gctaaaagtgcctcttctacaactgcatcctctacagctggttcctttgcagaacctggt
cctaaaccatcatttgcttttggacttcaagctgctgctaatgtgcccagcagcactgtc
gccaccactgcagtgcagccgttccagttcactgttgcagcttcaaacaccaccaccacc
actgcagctggtgcttttgggacaaactccatatttcaattcagcaagccaacatcctcc
actggtacagtctctgcaacatctgcgcaaccagtggtgaccacttttggccaggcccct
tctgttactgcgccagtagcaagtggctttatttttggtggtggtcctgccactgtatcc
accactgcaaacactagccagcccaccacatttggttcatctgcctctttcttcagtagt
ggatcatcttccttcactatgaacccaaatccttcttacaccactggccaaacagcccac
ccgtcaacaactaagccagctaatatgacttttggtagtactccctctcctttcaatttt
ggatcatcaactcaacaaccagctcagccagcattcgcaggaacaaatcaacctgctttt
ggggctaattcacagacctcctttggtacagctggcaacacccagttgtcatttggtgct
gctaagcctgttttatccttgggccaatctactagcattccagcccctgggtttggttct
ggcatgcctcagaccacaagtggctctgtgtttggaagtgcagctcaacctcagtttgga
tttcctacatctagtcagccaggcaacacaagctctgcctttggactggggacacacagc
accagtacagctccttcagtcagtgggtttaactttggatctggacagaatgcagcaccg
acaaacacttccgtttttggatctgctcctatggcttcaagtgtgatgagcaccccaaac
cacaacgcaacatttgcatttggatccaccaataccagtgaaaacaggctaacgtttgga
ggttcctctacaccaacctttggtcagagctccacagcagcaagcagcaatcagtctttt
gccacccctggcacacctgccatgggattctccactcctggcccttcctttggatcccct
gctcccgccttctctatcggagctggcagtaagacctctggcgctcggcagcggctgcag
gcacggaggcagcacacaagaaagaagtag
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