Pleurodeles waltl (Iberian ribbed newt): 138286478
Help
Entry
138286478 CDS
T10800
Symbol
NSUN5
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwl03009
]
138286478 (NSUN5)
Enzymes [BR:
pwl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
138286478 (NSUN5)
Ribosome biogenesis [BR:
pwl03009
]
Eukaryotic type
Other ribosome biogenesis factors
138286478 (NSUN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
138286478
NCBI-ProteinID:
XP_069082875
LinkDB
All DBs
Position
3_2:complement(71279938..71306521)
Genome browser
AA seq
483 aa
AA seq
DB search
MALYQVAAGILERAQRKEGAVKGLVYESGYKNIKQLYALVCETLRYSSILEGIINRTNLL
REEKKLKMNVAKVLVYDILIGKGLKCGGVWKMIARKHQARLQADLARLKVKKKVSRTEDL
LVPSEGAVKAPALPRYIRVNTLKTNAENVIDYFKRQGYAYLGRASSLQELGRLSGKQFLM
DLHLPDILVFPPRTDFHKNYLYTAGHIILQDKASSLPAFLLDPTSGSHVIDACAAPGNKT
SHLAALLKNKGKIFAFDMDTKRLATMGTLLLRAGVTCHQLANEDFLKVEASDPKYSCVQH
ILLDPSCSGSGIVDRLNDLTDDDGSSSAERLQALASFQRKVLSHALRFPAVEHLVYSTCS
VHQEENEDVVRHTLLENNAFRLVNALPSWPQRGLPVFPRAKCCLRASPTETLTNGFFVAL
FERKKGGEELLAQVSCKTAEQSDNNDEHVEKAEGNPLSVTKKKKKKKKSQQAPLEKIQKS
ETV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtaccaagttgccgccgggattttggagcgggcgcagagaaaggagggggcc
gtgaaggggctggtatacgagagcggctacaagaacattaagcaactctatgcattggtt
tgtgaaactcttcgttattcgtccattctggaggggatcataaaccgcaccaacctgctg
cgtgaagagaagaagctgaagatgaacgtggcaaaggtgctggtctatgacatcctcatt
gggaagggactgaagtgtggcggtgtctggaagatgattgcccgaaagcaccaggccaga
ctgcaggctgatcttgcccgcctcaaagtcaagaagaaagtaagccgcactgaagacctc
ttggtgccatcagaaggagcagtaaaagctccagccctgccccgctacatccgagtcaac
acgctgaaaactaatgcagaaaatgtcattgattactttaagcgacaaggctatgcctac
cttggccgagcctccagcttgcaggagctgggtcgtctctctggaaaacagttcctgatg
gatcttcaccttccagacattctggttttcccaccacgaacagatttccataagaactat
ctatacactgctggtcacatcatcctacaagataaggccagcagccttccagcctttctc
ctggaccccacctctggttcacatgtcattgatgcttgcgcagctcctggcaacaagact
agccacttggctgcactcctaaaaaacaaagggaagattttcgcctttgatatggacaca
aagcggttagccaccatgggcactctactgctgcgtgctggggtcacatgtcaccaactg
gctaatgaagattttcttaaagttgaagccagcgaccctaaatacagctgtgtccagcac
atcttgcttgatccatcctgcagcgggtccgggattgtggaccgtctaaatgaccttacg
gatgatgatggctcgtcatctgccgagcggctgcaggcactggcctcgttccagcgcaag
gtgctaagccatgcacttagatttccagctgtggagcatctggtttactccacatgctcg
gtgcaccaggaggagaatgaagatgtggtgcgacatacacttctggagaacaatgctttt
aggctggtaaatgctttaccttcctggccccaaaggggcctgccggtattccccagagca
aagtgctgtttaagagcatcaccgactgaaacgctgacaaatggcttctttgttgctctt
tttgagaggaagaagggaggagaagagcttctggcacaagtttcttgcaagactgctgag
caatcggataataatgacgaacatgtggaaaaggcagaagggaatcctctctcagtgacc
aaaaaaaaaaagaagaagaagaaaagtcagcaagcaccattagagaagatacaaaaatct
gaaacagtctga
DBGET
integrated database retrieval system
