Pleurodeles waltl (Iberian ribbed newt): 138286510
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Entry
138286510 CDS
T10800
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
138286510 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138286510 (RNF43)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138286510 (RNF43)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138286510 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING-like
FANCL_C
zf-C3HC4_3
DUF1514
zf-RING_16
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
138286510
NCBI-ProteinID:
XP_069082962
LinkDB
All DBs
Position
3_2:86238438..86559333
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AA seq
840 aa
AA seq
DB search
MSSSQRQLVILWPWLLMATLQAGLGHTGLVLAAAVESERAASQKALIRVIPLRMDSAEKD
NLTLEGVFAKVAEVTPAEGKLLQFHPLSLCNTSEDEQTKPGFVAIVKLESPERDVPPCLS
LPNKAKLAGERGARAIIFDITDDQDAFIQLQESTTMAQPVILIWGADAERLMEVVNNNRE
ARVKIEVKEQPKWPDYDVWILLTVVGTIFAIVLFSIIRFRCRQNQAEDSLHQQTLRAISQ
LATRKYRSGSEGRLRRRGLDSASSCSSAPVCAVCLEEFADGQDLRVISCSHEFHKDCVDP
WLRQNRTCPLCLYNITAGDQNVGRMPTPHQGVQLWRRYPGHARLHRSRTDTNPRTYPQGM
LAASAAVPTSTVPLLLSSELSQLDVGSLHYIPYPAQTSHRRCTQYRHSTQGGPPRPQRRM
SHWGGTPLHHRTCSQHYRTTCPGSRTGSARQHTNTSISHGQDGSCSGDSFRTEHSGYLAD
SPGSDSSSGPCHGSSSDSVQNCTDVSLQGVYGSHSTFRSSLSSDYDPHIYCGPENPTVNN
APNLPRRGSWSHSLESVHGIGTQAGNQFSSHIHYHHHRHHHYEKSSPCTSGIADQHLAPH
AKKITRSSGARTGSRTPRDCGTRTKTKAEKTQHCPKLVDTSTVSQNALHSSKPRLKQGHD
FTRNPSHLPVAQNFDGRGIDHSDVAGSMHFPRTQKWANSRHHRRKRKYPPEPTVPSHIPD
NLAMSEECTVHIHYDHNPSYCCPSAGQAPVPLLLNARVARDIPMRCCSRPHVVWERRPSH
TDPEPPCEKSPEGCKTTFPTDLSGAWATGNGALGYPCQSSLQQEQQGSKEEMEGMCEHTV
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctcccagcggcagctggtaatcctctggccctggttgctgatggcgactctg
caggcaggacttgggcacacaggtttggtgctggcagcagctgtggagtcagaacgtgca
gcctcccagaaggccctgatccgcgtgatcccactgaggatggattcagcagagaaggac
aacttgacccttgaaggagtgtttgcgaaggtggctgaggtgaccccagctgaagggaag
ctgctgcagtttcacccattgtccctctgcaataccagtgaagatgagcagacgaaacct
ggatttgttgcaattgtcaagttggagagtccagaacgagatgttcccccttgcttatca
ctgcccaacaaggcaaagttggcaggtgaaagaggagcaagagctattatctttgacatc
accgatgaccaggatgccttcatacagctgcaggagtccaccacaatggctcagcctgtc
atccttatctggggtgctgatgcagagcgccttatggaagttgtgaacaacaatagagag
gcgcgagtaaaaatcgaggtgaaggagcaaccaaagtggccagattatgatgtctggatc
cttcttactgtggttggcactatctttgccattgtcttattctccatcatccgcttccga
tgcagacagaaccaagctgaggattcattgcatcagcagacacttcgagccatcagtcag
ctggcaacacgcaaataccggtccggctcagaaggacgtcttcggcgcagagggctggat
tcagcgagcagctgcagctcggccccagtatgtgcagtctgcctggaagagtttgcagat
ggtcaggatttgagggtgatttcctgctctcatgagttccataaagactgtgtggatccc
tggttaaggcagaatcgaacctgtccactctgtctatataacatcacagcaggtgatcag
aatgtaggccggatgccaacaccgcatcagggggtgcagctctggagacgctatcctggc
cacgcacgcttgcatcgttcacgcactgacactaatccgaggacctacccccaagggatg
ctggcagcatcagctgctgttcctacatccacagtacctttactcttgtcctcggagtta
tcacagctcgacgtgggatccctgcactacattccttatcccgcacagacatcgcatcgt
cggtgcacacagtacaggcattctactcaaggggggccgccaagaccacagcggagaatg
tcacactggggagggactcctttgcaccacaggacatgctcacaacactaccggacaact
tgccctggatcaaggacgggatcagccagacagcacaccaacacttcgatcagtcatggg
caagatggcagctgctctggagacagcttccgaactgagcacagtggttaccttgctgac
agcccaggcagtgactccagctctggtccctgccatggctcctccagtgactctgttcag
aactgtacagatgtcagtcttcagggagtgtatgggagccattccacctttcgcagctcc
cttagcagtgactatgatcctcacatctactgtgggccagaaaatccaaccgtaaacaac
gctcctaacctgcctaggaggggaagctggtctcactctctggaatcagtccatggcatc
gggacccaagcaggcaaccagttttccagccacattcactatcaccaccaccgacaccat
cactatgaaaagagttccccgtgtacatcaggaatagctgatcaacaccttgctccacat
gccaagaaaattacgagatcttccggggccaggactggctctcgaacccctcgagattgt
ggcacccggaccaaaactaaagcagaaaaaacacagcactgtcccaagctggtagatacc
agcactgtgtcccaaaatgcacttcactcaagtaagccccgcttgaagcagggccatgac
ttcacaaggaacccttcccatttgccagttgcacagaactttgatggaaggggcattgat
cactctgatgttgccggatcaatgcactttccaaggacacagaaatgggcaaacagtcga
caccacaggcggaaaaggaaatatcctcctgagcctactgttccttcacacattccagac
aatttggccatgtcagaggaatgcactgttcatatccactatgaccataaccccagctat
tgctgtccttctgctggccaagccccagtgcccttactgttgaatgccagggttgctaga
gacattccaatgcgctgctgctcacgacctcatgtggtttgggagcgacgaccctcacac
acagatcctgaacctccgtgtgagaaatcaccagaaggctgcaaaactacattcccaacg
gatttatcgggagcgtgggccactggtaatggggcactgggttacccctgccagtcatct
ttgcagcaagagcagcagggatcaaaggaggaaatggaagggatgtgtgagcatacagtt
tag
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