Pleurodeles waltl (Iberian ribbed newt): 138286517
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Entry
138286517 CDS
T10800
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138286517 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138286517 (RABGEF1)
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138286517 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
138286517 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
Motif
Other DBs
NCBI-GeneID:
138286517
NCBI-ProteinID:
XP_069082972
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All DBs
Position
3_2:complement(91524333..91760612)
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AA seq
494 aa
AA seq
DB search
MSLKPERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEAAFASTQGAQGGQPALGFSKFEEKKTNEKTRKVTTVKKFFSSSSSKAPPKKAEN
QEVKTPSPAINRQPSIETDRVSKDFIEFLKTYQKPGQEVYKQCKLFLEAMHHKKELNIEE
QSEYVQDFYQNTSDKLQCRWKVSPEKAEKVLDEIEKFIMTRLYKHVFCPETTDDEKKDLA
VQRRIRALHWVTPQMLCVPVDEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKQ
IFNAIKVTKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPNRLMTGEDGYYFT
NLCCAMAFIEKLDAQSLNLSEEDFDRYMSGQASPKKQDSENWSSSMCLGVKQMHKNLDLI
SQLNERQERIVSEAKKLEKDLIDWTDGISKEVQDIVEKYPLDIKAKSQPLAAIDSENVEN
DKLPPPLQPQVYAG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaagccggaacgtagaggaattcatgtggaccagtcggagcttctttgtaag
aaaggatgtggttactatggcaaccctgcctggcagggtttctgctccaagtgttggagg
gaagagtaccacaaagcacgacagaaacagatccaggaagactgggagcttgcagagcga
ctgcagagagaagaggaggcggcgttcgccagcacccagggggcacagggtggccagccg
gccctcggcttctccaagtttgaggaaaagaaaacgaatgagaaaacacgcaaagtcacc
actgtgaagaaattcttcagctcctcctcctccaaggcacctcctaagaaggcagagaac
caggaagtgaagactccaagcccagctatcaacaggcagccaagcatagaaacagaccga
gtgtccaaggacttcatagaatttctgaagacctaccaaaaacctggtcaggaagtttat
aagcagtgtaagctcttcttggaagcgatgcatcacaaaaaggagttaaatatagaagag
cagtcggagtacgtccaggacttctaccagaacacgtctgataaactgcagtgtcgctgg
aaagtatctccagaaaaggcagaaaaggtattggatgagattgaaaaattcattatgact
cgcctatacaaacatgttttctgtcctgaaaccacagatgatgaaaagaaggatctcgct
gttcaaagaagaataagggcattgcattgggtgacgcctcagatgctgtgtgttcctgta
gatgaagatattcccgaggtatctgacatggttgttaaggccatcacagatattattgaa
atggattcaaagcgtgtccctcgcgacaagttagcatgcatcaccaggtgcagcaagcag
atcttcaatgctataaaggtgaccaaaaatgaacctgcctctgcagatgacttcttaccg
acccttatctacattgttttgaagggcaatccaccccgtctccagtccaacatccagtat
ataacccgtttctgtaaccctaatcggttaatgactggggaagatggatactattttact
aacctgtgctgtgctatggcctttattgaaaaactggatgcgcagtcgctaaacttaagt
gaagaggattttgaccggtacatgtctggccaggcatccccgaagaagcaggattctgaa
aactggtcttccagtatgtgtttgggggtcaagcagatgcacaaaaacctggacctcatc
tcacagttaaacgaacgacaagaaagaattgtcagtgaagccaagaagcttgagaaggac
ctcattgactggactgatgggatcagtaaggaggttcaggatatagttgagaaatatcca
ctggatatcaaagctaaaagtcagccattggcagccattgactctgaaaatgtggagaac
gacaagctgcccccaccgttgcagccgcaagtgtatgcgggataa
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