Pleurodeles waltl (Iberian ribbed newt): 138286620
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Entry
138286620 CDS
T10800
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
138286620 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138286620 (XRCC5)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
138286620 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
Cauli_AT
Phage_int_SAM_5
Motif
Other DBs
NCBI-GeneID:
138286620
NCBI-ProteinID:
XP_069083152
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Position
3_2:157765973..158256366
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AA seq
730 aa
AA seq
DB search
MARAAKSAVVLCMDVGHGMSNAVPGEESPFEQAKKVMVSFVQRQVFAESKEEIAVVLFGT
DGTNNNLARGDQYQNITVHRHLILPDFDLLEEIQNEIQPGSEQADFLDALVVCMDLLQNE
TLGKKYDRRHIAVFTDLSSPFSMDQVDIIIANMKSAGISLQFFLPFPVDEEEDDEDGAGG
GDGYNRPRSALYGKGLSDQQNEGIIMVKKTMMSLDEEDGLDEVYTFRDSLQRLSIFKKIE
RRPMAWPCQLTIGSHISIRIVGYKSVTEEKVKKSWTVVDAKTLQKEDIQKETVYCLNDDN
ETEVPSEDTIQGFRYGSDIVPFSKVDQEQMKYKIDGKCFSVLGFTKSQNIKTHQFMGSQV
LKVFAPKDDEAAAVALSALIQALDQTGMVAIVRYAYDRRSNPQVGVAFPHIKEKYECLVY
VQLPYMEDIRQYMFASLKSNKKAIPTEEQLSAVDSLIDSMSLVEDDGESVEDLFKPSKIP
NPQFQRLFQCLQHKAFNPDEPIPPIDDHITYMLDKPEEVTAQCQAPLAKVKSRFPLQEAV
KKKDLKTGQDIFKDADDGEPDAKKGKMEDDENEFSLATLAEGNITSVGSVNPDENFRYLL
KQKNVNFSEVSQQLIDRIYEFLETKRLQYYMKSINCIRAFRQAAIKLSKVEQFNSFLRVL
KDRVEERTLTEFWDIVVQDAISLITKMEAEGSTVSSEEAKQFLAPKEKKEDISFSAGEEG
GDVDDLLDMM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcagccaagagtgcggtggtgctgtgcatggatgttggccatggcatgagc
aatgctgtccctggggaagagtctccttttgagcaggctaagaaggtgatggtgagcttc
gttcagagacaggtgtttgctgagagcaaggaggagattgctgttgtcctgtttggcacg
gatggcacaaataataaccttgctcgtggagatcaataccagaacataaccgtgcaccgg
cacctcatcctgccagatttcgatctgctagaagaaattcaaaatgaaattcaacctgga
tctgaacaagccgacttcttggatgccctggtggtctgcatggaccttctgcaaaatgaa
accctggggaagaagtacgatagacgtcacattgctgtgtttactgacctgagcagccca
ttcagcatggaccaggtggacatcatcattgccaacatgaagagtgctgggatctccctg
cagttctttttgcccttcccagtggacgaggaggaggatgatgaagatggagctggaggt
ggagacggctacaacagacctcgaagtgccctttatgggaagggattatcggatcagcag
aatgagggaataataatggttaagaaaacgatgatgtccttggatgaggaagatggcctg
gatgaagtgtacacctttagggacagcctgcagcgcctctccatctttaagaagattgag
cgcaggcccatggcttggccctgccagctcaccatcggcagccacatctccatacgaatc
gtgggctacaaatccgtcacagaggagaaagtgaaaaaatcatggacggttgtggatgca
aagactttacaaaaggaagatattcaaaaggaaactgtttactgcctgaatgatgacaac
gagacagaagttcccagtgaagacactatccaaggatttcgttatggcagtgatattgtc
cccttctcgaaggttgaccaggaacaaatgaagtacaaaattgatggaaagtgtttttct
gttttaggattcacaaagtcccaaaatataaagacgcatcagttcatgggcagccaggtg
ctgaaggtctttgcgcccaaagacgatgaggctgctgcggtggctctatctgcattgatc
caggccctggaccagaccggcatggtggcaattgtgcgatatgcttacgaccgaaggtcc
aacccgcaggttggcgtagcctttccacacatcaaagagaagtatgagtgtttggtgtat
gtacagcttccatacatggaggatatcaggcagtacatgtttgcttcactgaaaagcaac
aagaaagccattcccacagaggagcagctttctgctgtcgactctctgattgattcgatg
agcctagtagaagatgatggcgaatctgttgaagatctattcaagcctagcaaaatcccc
aaccctcaattccagaggttgtttcagtgcttgcaacacaaagcctttaatcctgatgaa
ccgatcccaccaattgacgaccatatcacatacatgttggacaaacctgaggaagtgacg
gcgcagtgccaggctcctctggcgaaagtcaaatcgcgatttccgctgcaagaggcagtg
aagaaaaaagatctgaagacggggcaggatatcttcaaagacgcagatgatggggaacca
gacgcaaagaaagggaaaatggaggatgacgagaatgaatttagtcttgcaactctggct
gaaggaaacatcacatctgtgggaagtgttaatccagatgaaaacttccgttacttgttg
aagcagaagaatgtcaacttcagtgaagtgagccagcagctcatagaccgcatctacgag
tttctggaaaccaaacggctgcagtactacatgaagagcataaactgcatcagagcattc
agacaagcagccatcaagctgtccaaggtcgagcagttcaactcctttctgcgtgtcctg
aaagacagagtggaggagaggacactgaccgagttctgggacattgttgtgcaagatgcc
atttccttgattactaaaatggaagcagagggaagcacggtctccagcgaggaagccaag
cagtttttggctccaaaggaaaaaaaggaagacatctctttcagcgcaggagaagaaggc
ggagatgtggatgatttgctcgacatgatgtaa
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