Pleurodeles waltl (Iberian ribbed newt): 138286647
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Entry
138286647 CDS
T10800
Symbol
CNOT9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138286647 (CNOT9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138286647 (CNOT9)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138286647 (CNOT9)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
138286647
NCBI-ProteinID:
XP_069083209
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All DBs
Position
3_2:174503143..174613863
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AA seq
299 aa
AA seq
DB search
MHSLATPAPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSF
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctagccacgcctgcgcctgtgccaacggcactggcgcaggtggacagagaa
aagatataccagtggatcaacgagctatcaagccctgagacccgagagaatgccttgctg
gagctgagtaagaagcgagaatctgtccctgacctcgccccaatgctctggcattctttt
ggtaccattgcagcactacttcaggagattgtaaatatttatccatcaattaacccgccc
acccttacagcacatcagtcaaacagagtttgcaatgccttggccttattgcagtgtgtg
gcatctcatccagaaaccagatcagcgtttcttgctgcccacatccctctcttcctgtat
ccgttcttgcacacagtcagtaagacccggcctttcgaatacttgcggcttactagcctc
ggggtaattggggcactggtaaaaactgatgagcaagaagtcatcaactttctcctgacc
actgaaatcattccactctgccttcgtatcatggagtccggaagcgaactttccaagacg
gttgccaccttcattcttcagaagatcctccttgatgatacaggccttgcttacatctgt
cagacctatgagagattttctcatgtcgccatgattttgggcaaaatggtcttgcagctg
tcaaaggaaccttctgcccgattgctgaaacatgtagttcgatgctacctccgtctctct
gataacccaagggcccgtgaagctctgaggcagtgcctcccagatcagctcaaggacaca
acttttgcccaggttctcaaggacgacacgaccaccaaacgctggctggcacagctggtg
aagaatctccaggagggacaggtcactgaccctaggggcatccctcttcctccccagtga
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