Pleurodeles waltl (Iberian ribbed newt): 138287422
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Entry
138287422 CDS
T10800
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Enzymes [BR:
pwl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
138287422
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
138287422
Prokaryotic type
138287422
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
138287422
NCBI-ProteinID:
XP_069083940
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Position
4_1:complement(106701474..106742423)
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AA seq
386 aa
AA seq
DB search
MKAIRLLNIWSCKRWVRGQQNSAQTFSPFSDGVQSRAVSSRSAEDVLKEDVPDREEQHAE
GSEIKEVRQPKRKYALLMAYSGREYYGMQINPGVPTVELVLISAFINAQCVPKDCTTTVR
TWLNLQRCARTDKGVSALGQLVSVRLLKSEDLMEKINAHLPADIRVLGVKQVTKGFNAKS
MCEARTYSYTLPTFALAHGTEPDSSFRLPREDFHRFHHILTFYQGTHRYHNFTSHKTADD
PSVFRHMFKATLQEPYLDMGHEFTTIEITGQSFLLHQIRKMVGLALAVSRGVVPEDFLPA
SVAAENRLKIRTAPGLGLVLEQTYFKWYNKRFGGDGLHSPLTWEDAAPATETFRKDHILP
AIVQGELEDLSMTRWLRTLSEPSQDE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaattcgcttgttgaacatctggtcatgcaagagatgggttcgaggacagcag
aactcagcacaaacattctcgcctttttcagatggagtgcaaagtagagcagtgtcttca
cggagtgccgaagatgtactgaaggaagatgtcccagaccgagaggaacaacatgcagag
ggaagtgagatcaaagaggtcagacagccaaaaaggaagtatgccctcttgatggcatat
agtggcagagaatactatggaatgcagataaaccctggggtgcccactgttgagttggtg
ctgatttctgcattcataaatgctcagtgcgtcccaaaggactgtaccactacggtgcgg
acctggctgaatctccagcgttgtgccaggacggacaagggcgtctccgcattggggcag
ctggtctccgtgcggctcctcaagtccgaagacctgatggagaagatcaacgcccaccta
cccgctgacatccgcgtactaggtgtgaagcaagtcactaaaggatttaacgctaagagt
atgtgtgaggcaaggacctattcatacactctgccaaccttcgcgctcgcccatggtact
gagccagactccagcttccgcctaccacgagaggactttcatcgtttccaccatattctc
actttctatcaaggcacccaccgctaccacaatttcacctcacacaagactgctgatgac
cccagtgtgttccgacacatgtttaaggcgaccttacaggagccatacttggacatgggc
cacgagttcaccaccatcgagatcacagggcagagcttcctgttgcatcagatccggaag
atggtaggtctggcactagctgtgtcccggggggtggtacctgaggactttctacctgca
tccgtggctgcagagaacaggttgaagatccggactgcccctggactggggctagtttta
gagcagacctatttcaagtggtacaacaagcgctttggtggggatggtctgcactctcca
ctcacgtgggaggatgccgcgccagcgacagagaccttccgcaaggaccacatactacct
gcaattgtgcagggagagctggaggatctatcgatgactcgatggttgaggacgctctca
gaacccagccaggacgagtga
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