Pleurodeles waltl (Iberian ribbed newt): 138287438
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Entry
138287438 CDS
T10800
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
Brite
Enzymes [BR:
pwl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
138287438 (PNLDC1)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138287438 (PNLDC1)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
138287438
NCBI-ProteinID:
XP_069083961
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Position
4_1:111851271..112109968
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AA seq
528 aa
AA seq
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MDILRSQLEDMLPVLEDLVQKCDFLALDMEFTGLHSLAYGKQPSLFDSASDWYRKARLSV
KKFSVCQIGLSLFYKQDSNRFISHSFNFYLFPATFARIDSEFSVQASSIAFLSKFGFDFN
KFLKEGIPYMNQEQEKRFLQDYREGNWRVRSTLEKDSLKKAIEEVTCWVTSAAEGGTMIL
RDLTGFEVFNVQLVLRQALPNVWTVPMGNKVFVRKVSPRQRWQMERQDLDPCRKERILIS
VLGFTIIFRFIVAAKKPLVGHNMLMDLLHLYDKFYQSLPESYEEFKKNLHTLFPFIIDTK
VVTRAVWKELQFPRTGTLMDVYGLLNSNQNPAQPSSPLIEHAPDCRKYVEEAHPHEAAYD
AFVCGSVLVKLGHLLLVTHQMDTEDPERPFSRYMDVISEHINQVNLIRARVSRINFSGED
ICIRRPPALLVCVQGWPGVNEEQLYREFKSVCTLDVKRLGKDRFLLLVTNFKGMRAIRRT
YKGHAHLRMCEYSYWKHSPLVNGILQVCGVVLAWSAVTFTLCTTPFWT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatattctcagaagccaactggaagatatgctgccagtccttgaagatcttgttcag
aaatgtgactttttggcactggatatggaatttactggccttcattctcttgcatatggt
aaacagccaagtctctttgactccgcctcagactggtaccgtaaggctcgtctcagtgtt
aagaagttctccgtttgccaaattgggttgtctctgttctacaagcaagactcaaaccgc
ttcatctcgcactcgttcaacttctacctcttcccagctacctttgcacgaatcgattct
gagttcagtgtacaagcatccagcattgctttcctctctaagtttggttttgattttaac
aagttcttgaaggaaggcatcccgtatatgaaccaggagcaggaaaagcggtttcttcag
gactatcgagaaggaaactggcgggtacgcagtactttggagaaggactccttgaaaaag
gcgatagaagaagtgacttgttgggttacatctgcagctgaaggaggtaccatgattctg
cgtgacctaaccggtttcgaagtgtttaatgtccagttggtgctaaggcaggctttgcca
aatgtctggactgtgcccatgggaaataaggtattcgtacggaaggtctcaccccgtcaa
cgttggcaaatggagcgtcaggatttagatccgtgtcgcaaggagcgaatacttatttct
gttctgggattcaccatcattttccgattcattgtagcagcaaagaagcctctggtcgga
cacaacatgctgatggatctccttcacctttacgataagttctaccagtcactgccagaa
agttacgaggaatttaagaagaatcttcacaccctcttcccattcattattgatacaaag
gtagtgacacgggcagtttggaaggaactgcagtttccaagaacaggaaccctcatggac
gtgtacggcttactcaacagtaaccagaatcctgcacagccatccagccctctcattgag
catgctccagactgcagaaagtacgtggaagaagcgcacccccacgaggctgcctacgat
gcttttgtttgtggatcagtgctcgtaaagcttggccatcttttacttgtaacgcatcaa
atggacactgaggatcctgagcgtcctttctctcgttacatggatgtaatcagtgaacat
atcaaccaagtgaatctcatccgtgctagagtctcccgcattaatttctcaggtgaggat
atctgcatccggcggccgcctgccttgctggtctgcgtccagggatggccaggagtgaat
gaagagcaattgtaccgtgaattcaaatcagtctgcaccctggatgtaaagcgcctagga
aaagacagatttctgcttcttgttacgaattttaaaggcatgcgagccattcgtcggaca
tataagggccacgcccacctgcgtatgtgtgaatacagctattggaaacattctcccctg
gtcaatggcatcctccaagtctgtggggtggtgctggcttggtctgctgtcacattcaca
ctatgtacaactcctttctggacctga
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