Pleurodeles waltl (Iberian ribbed newt): 138287481
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Entry
138287481 CDS
T10800
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138287481 (PRDM4)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
138287481 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
Zn_ribbon_PRDM4
zf-C2H2_4
SET
C2CH-3rd_BIRD-IDD
zf-C2H2_16
zf-C2H2_jaz
Rad50_zn_hook
zf-H2C2_5
DUF7479
PTPRCAP
zf-met
Motif
Other DBs
NCBI-GeneID:
138287481
NCBI-ProteinID:
XP_069084027
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Position
4_1:141381186..141502177
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AA seq
805 aa
AA seq
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MHLRMNDMNLSPVGIDQLSSSSVGSALPISGSHLGLSASPTHNSVPTAGLPVAIPNLGTS
LSSLPSALSLMLPMGIGDLGVMCSLPERNYPLPPPSYSHLESSYIRHILPGILSYLADRP
PPQYIYPSSLNVDNNQGLPLSSNHAGMDHYHPGASVNLESGIVSLDSRSVLAHGAPNLHH
SDEHDVQLESGTAMESVSRVASPISTDHMTEELTLEEVAGDHQQMSTGSRNHQTLTVDTV
GSGFDPDSVAQRGVLAIHAGTLELPVVLEPEHHHIASRENISESTLNSIHTMAMSTHSVS
VALSTSHPLSSLASVSLHRGDISLEPVTVSSIPHEVSMGPGEMDVSSENLSFVPSPLKLE
HSNSNKENMSTLFTICEWCTLCDQAYPSDCPEHGPVTFIPDTPIQSRARLSLPKQLMLQQ
SVTGADVGVWAEETIPARTCFGPLVGRESQSLNIQGWTDKATSHIWKMYYNNVLEFCIVT
ANENECNWMMFVRKARNPNEQNLVAYAHDRMIYFCTSRDIAPEQELLFYYSRDYARHIGV
PEQPDVHVCHCGKECMSYADFKTHLTSHVQNQEPRQTQNSNHSAGHSKERKWKCPMCQRA
FSSPSKVNVHLMGHMGMKPFKCEFCSKAFSDPSNLRTHLRIHTGQKNFRCGLCDKSFTQK
SHQTSHMVIHTREKTLKCDFCDKMFMRRQDLKEHVLIHTRERQIKCPKCERLFCRTSHLK
KHMNSHEGKRDFVCEKCSKAFLTKYHLTRHLNICKGPRSGHSSNEPEEEDEEDSEDEVLM
GSGNTKDCSQNSAVYVSSDSVPENK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaagaatgaatgacatgaacctcagtcctgttgggatagatcagctcagcagc
tcctctgttggctctgctttgcccatctcaggaagtcatttgggactttctgcttcacca
actcacaactctgtacccacagcaggcttacctgtagcaattccaaacttgggcacatct
ctgagctcactgccctctgccttgtctctgatgctgccaatgggcattggggatcttgga
gtgatgtgcagcctgccagaaagaaattacccccttccgcctccatcatactctcatctt
gaaagcagctacatccggcacattctacctggtatattgtcttacttggcagacagaccc
cctcctcagtacatctatcccagctcgctaaatgtggacaacaatcaaggattacccttg
tccagtaaccatgctggcatggaccactatcaccctggtgcctctgtgaacctggagtct
gggatagtgtccttggactcccgctcggtgcttgctcatggggctccaaacctgcatcac
agtgatgagcatgacgtgcagctagagtctggaacagcaatggagagtgtttctcgggta
gccagccccatctctacagaccacatgacagaagaattgactctagaagaagtagcaggg
gaccatcaacagatgtcaactggttcccggaatcatcaaacattgacagtagatactgtg
ggcagtggctttgatcccgattcagtggcgcaacgaggtgtgttggcaatccatgctggc
acgctggagcttccagtggtcttggagcctgagcaccaccacattgctagccgtgagaac
atctcagaaagcacacttaactctattcatacgatggctatgagcactcactctgtgagt
gtggctctatctacgtcacatccactttcatctctggcctctgtctctcttcatcgcgga
gacataagcttagagcctgtgacagtgtcttccattccccatgaggtttccatgggacca
ggagaaatggatgtttcttcagaaaacctttcatttgtgccgtctcctctaaaactagaa
cactctaattccaacaaagaaaatatgtcaacgttgtttacaatatgtgagtggtgcact
ctttgtgaccaggcatacccatctgactgtcccgaacatggaccggtcaccttcatccca
gatacacccatccaaagcagggccagactttcccttcccaaacagctgatgctgcagcag
tcggtaactggagcggatgtaggtgtctgggcagaggagaccattccagctagaacttgc
tttgggccccttgtcggacgggagagccagtcattgaatatccagggctggacggataag
gcaacgagccacatttggaaaatgtattacaacaatgttctggagttctgcattgtcaca
gccaacgagaatgagtgcaactggatgatgtttgtgcgcaaagctaggaacccaaatgag
cagaatttagtggcctatgcccatgacagaatgatatacttttgcacctcgcgggatatt
gcacccgagcaggagcttctcttttactacagtcgtgattacgcaaggcatattggtgtc
cctgagcagccagatgtgcatgtgtgtcactgtgggaaggagtgcatgtcctacgcagac
ttcaaaactcacctgaccagccacgtccaaaaccaggaacccagacagacacaaaatagc
aaccactctgcgggccactccaaagagaggaagtggaagtgtcccatgtgccagcgcgcc
ttctcttccccttccaaagtgaacgttcacttgatgggccacatgggaatgaagccgttc
aagtgcgagttctgcagcaaggccttcagtgaccccagcaacctgcgcacacacctgagg
atacacacaggtcagaagaattttcgctgtggcttgtgtgacaaatcctttactcagaag
tcccaccagacctcacacatggtgattcacaccagggagaagaccttgaagtgtgacttt
tgtgacaagatgttcatgaggcgtcaggacctaaaagagcatgtgctaatccacaccagg
gaacgacagatcaagtgccccaagtgtgagcgtcttttctgcaggacaagccacctgaag
aagcatatgaactctcatgaaggcaagcgggactttgtctgcgaaaaatgttccaaagcc
ttcctgacaaagtaccacctcacccggcacttgaacatctgcaagggtcccaggtcaggc
cactcctccaatgaaccggaagaagaggatgaagaggactctgaggatgaagtattaatg
ggctcaggcaacacaaaggactgtagtcagaacagtgccgtctatgtctctagtgactca
gttcctgaaaacaagtaa
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