Pleurodeles waltl (Iberian ribbed newt): 138287518
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Entry
138287518 CDS
T10800
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pwl01001
]
138287518 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138287518 (TRIM24)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138287518 (TRIM24)
Protein kinases [BR:
pwl01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
138287518 (TRIM24)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138287518 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
PHD-1st_NSD
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
138287518
NCBI-ProteinID:
XP_069084084
LinkDB
All DBs
Position
4_1:178874400..179533777
Genome browser
AA seq
1086 aa
AA seq
DB search
MEEPPATPVEKEPEPPAVVPDPAPPSAPASAPPPAPLSAENEAESRQGPEEGGGERAALN
LLDTCAVCKQNITSRGPCLLPCLHSFCRRCLPPPERYVSVPAGPQHPLPSPPAQQPQGPR
AAPEPPSTQVGVIRCPVCSQECAERHIIDNYFVRDTTEVPSSTVEKSSQACTSCEDNAEA
QGFCVECVEWLCKTCVRAHQRVKFTKEHTVRQKEEVSPEATGVSSQRPVFCPFHKKEQLR
LYCETCDKLTCRDCQLQEHKEHRYQFIEEAFLGQKVVIDTLINKLMEKNKYIKFTGDQIQ
NRIHEINQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDRRMKLLKQQHEVAGL
SSQLEHVVDFSKWAVSSGSSTALLYSKRLITYRLKHLLRARCDATPITSSIQFQCDASSW
AQHIFHLGSLVIEENDVPQHATPMEVHNLQAQNTATQNAETQGSTANQLSKFPTQINLAQ
LRLQHMQQQILAQRQQAQRRAAAAGPPHSMGLQSPTGPPHPMGLQNPRVQGSISHQPSPS
NQVPRLVNYQHMNAKSNGPMLPVQQLRFPQNMPNPQNIQAVQNIQNMHNIQTVQNMQNMQ
NMQNIQNVQAAQNMQNMQSIQNMQAVQNMQNSQNLQNAQNMHAITRRAMRPNHMQMAYLA
QHGMKQIDSSGNIVMESMMRKDGGLDNQHRHSSNRTVQSPNSSVPSPGLLGAMVASVHPP
MRSPSASSIGSRESSSSRPIGGADSTHKVPVVMLEPIRIKPESHMEHCDYPVVMVKQEAN
HEQQPVSRSSGYSRSILTSMLLDSNNNSRTEATPRRDAPDSTGDRPTHQGNSFSGKPAWM
SMTPMTPRHTAEGSSGGKEDDPNEDWCAVCQNGGELLCCDKCPKVFHLSCHVPTLMNFPS
GEWICTFCRDLATPEVEYDCDDPAQNPDKRKAATVANLPPIDQRKCERLLLYLFCHEMSL
AFQDPVPLTVPDYYKIIRRPMDLSAIKKKLQSSHGPCYTKSEEFVADVRLIFRNCAEFNE
PESEVASAGLKLEAYFEELLLNMYPEKKFPSKGLYNVDGQFSDDSEDEFVVPRKKRFKGE
DRQLLK
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcctcccgccacccccgtggagaaggagccggagccaccggcagtggtccct
gacccggcgccaccatcggccccagcgtcggctccccctcctgccccactcagcgctgag
aacgaggcagagagccggcagggcccagaggagggcggcggggagcgggccgcgctgaac
cttctggatacctgcgcggtgtgcaaacagaatataacctcgcgcggaccctgcctgctg
ccctgtttacactccttctgccgccgctgcttgcccccacctgagcggtacgtcagcgtg
ccggctgggccccagcatccgcttccctccccgccggcccagcagccgcaaggcccccga
gcagcgcccgagccgcccagcacccaggttggtgtgatacgatgcccagtatgcagccag
gagtgtgcagagaggcacataatcgataactattttgtgagggacaccactgaggttcct
agcagcactgttgaaaagtcaagccaggcatgtacaagctgtgaggataacgcagaggct
cagggattttgtgttgaatgcgtggaatggttgtgcaagacttgtgtccgtgcccatcag
agagtcaaattcacaaaagaacatacagtgcgacagaaggaagaagtatcaccagaagcg
acaggggtgagcagtcagaggcctgtgttttgcccttttcataaaaaggagcaacttagg
ctgtactgtgaaacctgtgacaagctgacatgcagggattgccaattacaagaacacaaa
gagcacaggtatcagtttattgaagaggcttttcttggccagaaggttgttatcgatact
ttgatcaacaagctgatggaaaagaataaatacatcaaatttactggggaccagatccaa
aacagaattcacgaaattaaccaaaatcaaaagcaagttgagcaggacattaaagttgca
atatttacattgatggtagagatcaacaagaagggaaaggctcttctgcatcagctagag
agcttggcaaaagatcggcgaatgaagcttctgaagcaacagcatgaagtggctggtctt
tccagtcagctggaacatgtagttgatttctctaaatgggctgtttccagtgggagcagc
acagccttgctgtacagcaaacgcttgattacctatagactgaaacatcttctccgtgca
cggtgtgatgccacgcctatcacaagctcaattcagtttcagtgtgacgccagctcatgg
gcacaacatatctttcatctaggttctttggttattgaggaaaatgatgtcccacagcat
gcaactcccatggaggtccacaatctgcaggcacagaacactgctactcagaatgccgaa
acacaaggatcaactgctaaccagctatcgaagttccccacacagatcaatttggcacag
cttcgcctgcagcacatgcagcagcagatcttggcccagaggcagcaggcacagcgtcgc
gcagctgctgcaggtcctccccattccatggggctccagagtccaactgggccgccacac
cctatggggcttcagaaccctagagttcagggctcaatttctcatcagccttcaccatca
aatcaggtccctcgtttggtaaattaccagcatatgaatgcaaaatctaatggaccgatg
cttcccgtccagcagctgagattcccgcaaaacatgccaaatcctcagaacatacaggct
gttcaaaatatccagaatatgcataatatacagactgtgcaaaacatgcagaatatgcag
aatatgcagaacatccagaatgtacaggctgcacaaaacatgcagaatatgcaaagcatt
cagaacatgcaggctgtgcaaaacatgcaaaacagccaaaacttgcaaaatgcacaaaat
atgcatgctatcacacgacgagcaatgaggcccaaccatatgcagatggcatatttggca
cagcatggcatgaaacagattgacagctcaggaaacattgtaatggagagcatgatgcgg
aaggatggtggtcttgataaccagcacagacactcctctaacaggactgttcagtcacca
aactcatcagtgccatcaccaggacttctaggagctatggtggccagtgtccatccaccc
atgcgctcacccagtgcatctagtattggaagcagagaaagctcttccagcaggcctatt
ggtggagcagattctacacacaaagtcccagtggttatgctggagcccatccgcataaag
ccagagagtcacatggagcactgcgattatcctgttgtgatggtaaagcaggaagcaaat
catgaacagcaaccagtctctcgcagttcaggctactcaagaagcattcttacatcaatg
ctcttggacagcaataataattccagaacagaagcaactccaagaagggatgccccagac
agcactggtgacagacctactcatcaaggaaactcatttagtggaaagccagcatggatg
tccatgactccaatgacaccccgtcacactgcagagggtagcagtggcggcaaagaagat
gatcccaatgaggattggtgtgctgtttgccagaatggaggggaacttctttgttgtgac
aagtgccccaaagttttccacctatcatgccatgttcctactctgatgaactttccaagt
ggggaatggatctgcactttctgtcgagacctagccacgccggaggttgaatatgattgt
gacgatccagctcagaatcctgataaaaggaaagctgcgacagttgcaaatctgccacct
atagaccagcggaagtgtgaaaggctgctgctttaccttttctgccatgagatgagcctg
gccttccaagatcctgttccactaacagtacctgactactacaaaataattaggaggcca
atggacttgtcagctattaagaagaaacttcaatccagtcacggtccttgttacacaaag
tcggaggagtttgtggcagatgttcgtctgatcttcaggaactgtgcagaatttaatgag
ccggagtctgaagtagccagtgctggattgaaattggaagcctactttgaagaattgctt
ttaaacatgtatccagaaaagaaatttccttcaaaaggactgtataatgttgatgggcag
tttagcgatgattcagaagatgaatttgtagtacctcgaaaaaagcgcttcaaaggagag
gatcgtcaattgttgaaatag
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integrated database retrieval system
