Pleurodeles waltl (Iberian ribbed newt): 138287555
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Entry
138287555 CDS
T10800
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138287555 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138287555 (DCP1B)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138287555 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
138287555 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
138287555
NCBI-ProteinID:
XP_069084175
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Position
4_1:194602115..194754189
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AA seq
647 aa
AA seq
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MVVSAVVYRFELRGASPLSVSMAPVAAEGKMAASGVAVSGLLLEKGLDISLAALRRHDPY
IRGILDVASQVALYTFSHTASEWEKTDVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPI
TKDLDFQLQDPFLLYKNARFSIYGIWFYDKEECQRIAELMKNLTQEEQLKARQEAGAMVS
PMNVNSGDSKEVDILQMLTKAKDEYTKFLFQCTACSEPKQISGSTSIYDNPKLIKPIPVK
PKETQLQPAPPQGDLSDSEPQHLSLMALFGKPGTASDPLEKEQKQQSEQLGVRQGVARSL
FYEDPDELGPHKISIPQEKHLCPAIQKLMVRSTDLHPVSELPENRLYENGNVHTTEDLFT
GLFQPVAQQSMVSSLQIQDMSEEQSLLQTLHSTHGPATKLGQGSMGLVSSTIPIFSRTQM
KSMSQPQPVYFNTCLKTETLRPQSLVTDHSKLQRQPFSFSANPPSSTDVLSPQELLKKLH
IVQQEQQFNTSSRPALAAKFPTVSESTATLKPLQSWMDKTSRTDKQNPLFQVISPQRIPA
TVAPALLMSPMVFTHSVSSQPKNSTSGRMPPMNESTLGPASLLLPLQGTEHSVVNSASNN
CMNRGVLTKLQLQETLMHLIQNDEHFLNIIYDTYVSNLTKGTMSKKM
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggtggtctctgctgttgtgtacaggtttgaactgcgcggcgctagtccgctctctgtg
tccatggcgccggtggccgcagaggggaagatggctgcctctggggtggcggtgagcggg
ctgcttctggagaagggactggacatcagcctcgctgctctgcgcaggcacgacccctat
attcgcggaattctggacgtagccagccaagtagcgctctacactttcagccacacagcg
agcgaatgggagaagacagatgtggagggaacactctttgtttacaccagatcagcctct
cccaagcatggcttcaccatcatgaaccggttaagcatggaaaaccgcaccgaacccatt
acgaaagatctggacttccagttacaagatccgttcttactgtacaaaaatgccagattt
tccatatacgggatttggttttatgacaaggaagaatgccaaagaatcgcagagctcatg
aaaaatctaactcaagaagagcagcttaaggcacgacaagaggccggagccatggtatct
ccaatgaacgtaaactcgggggatagcaaggaagtggatatcttgcagatgcttactaag
gccaaagatgaatacactaagtttctgtttcagtgcacagcatgttcagagccaaaacag
atatccggttcaacttccatctatgacaatccaaagttgataaagcccattccagtgaag
ccgaaagagacccagctgcagccagctcctccacaaggcgatctctcagattcggaaccc
cagcacttatcattgatggcactctttggaaagccaggcacagcctcagaccccttggag
aaggaacagaagcagcagtcagagcaacttggtgtccggcagggtgtggcacgctcctta
ttctatgaggaccctgacgagctgggacctcataaaatctccatacctcaagaaaagcat
ctttgcccagccattcagaaactgatggtgcgtagcactgaccttcatccagtctctgag
ctgccggagaacagactgtatgagaatggtaatgtgcacaccacagaggaccttttcact
gggctctttcaacctgttgcgcagcagagtatggtatcttctctccaaatccaggacatg
agcgaagagcagagcctgttgcaaactttgcatagtacacatggcccagcgaccaaatta
ggtcagggctcaatgggtcttgtaagctccaccattcccatcttcagtaggactcaaatg
aagagcatgagccagccacagcctgtttatttcaacacttgcctaaaaacagagactctg
aggccacagtctcttgtcactgaccacagcaagcttcaaagacaaccgttttcattttct
gcaaacccaccatcaagtactgacgttctttccccacaggagctgctaaaaaagcttcat
attgtacagcaggagcagcagtttaatacctcaagtagacctgctttagcagcaaagttc
cctactgtctccgaaagtactgccacactcaagcctttgcaatcgtggatggataagact
tcacggacggacaagcagaaccccctttttcaggtcatctcacctcagcgcattccagcc
accgttgccccagcactgctgatgtcccctatggtgttcactcactcagtatcctctcag
ccaaagaacagcaccagcgggaggatgccgccaatgaacgagtccaccctgggtccggcc
agcctgctcctgcctttacagggcaccgaacactctgttgtcaacagcgccagcaataac
tgtatgaaccgtggggtgctgaccaagctacagctgcaggaaacacttatgcatcttatt
cagaacgatgaacattttttaaatataatctatgacacctatgtttctaacctgacgaag
ggaacaatgagcaagaaaatgtga
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