Pleurodeles waltl (Iberian ribbed newt): 138287614
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Entry
138287614 CDS
T10800
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
138287614 (CAPRIN2)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138287614
NCBI-ProteinID:
XP_069084295
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Position
4_1:complement(232521942..233265867)
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AA seq
1081 aa
AA seq
DB search
MVQLSQSPYRRLSTEKSMKLTRQQEDGSPPLLKTLPVVLSSANTQYQAYETYIDNGLICL
KHKIRNIEKKKIKLQDYRDRMNNGEMLNPDQLEAVEKYDEILHNLEFAKELQKTFAALNQ
ELLKAQKKILRRETMVKVEAEKKKLCTIFQVRYILKNMSQEHVQKDFRAGLNGAMCLTTS
ELGWLVKFSKLTCPKRDESLSLEDQMEQLSLHYWELLEASEKSVAGTTYKTLKDIMAKIL
NCGYFESIPAHHVHEKIDFQEDMKKPQAPTKTKADKTSEASVKCMLSNDIHPCEFLNRRY
LPEGDCIKKELVKSKPWDSDYAGKPQALQPWNILTKEADPKMHQPIPVQNPPKQSRATNF
IPKEKSWKESIDRKLPLPVQGPQSSVQGPQSSVQGPQSSVQGPQSSVQGPQSSVQGPQSS
VPVMQTPKQRGVTNLIPKEVLRPKVEVPPKERRERQQKVESEVNHSAKSVNQADAEFCST
SSLPDDPLLRRQKLEDLMTKIQGTYHFMQESVLDFDTLSQNTTAISLQSPPSVPKDEKLT
NQCGASLQSEQICLGTLTGSNDSLNTTEDTVFVSEMDLSTTEQVTEVGLSLPGETENHAP
AKALYPSVVSETEQQNEDNSKACIPLSNDQQNSTSLAPSSSSLSPVSKGLAFQPPSANGS
SGNIPSAPFQAVQTRNHYLASGNMQTAKNMMVFKVNAPLPPRKEFDMKDEPPYPVGYNQS
YTTASTQTGPQSILQPTQIVEQASFVQESPSGPGAPEHVDGSRSQRRAKEDQDVTLPYQT
DGTIQMSNGNASFYQAQGSNFGRSAAPYINCRGSVRGATRGGRGLVNSYRSPSGYKVGFD
GYRGGPPSAINGNCSQLQYSTREYPGTQYVQRDGSYQQGYKRGTSGGQRPNSRGWSDSSQ
ISSPERDHEVFHCGDSGQGDSRSLTPMDMPVTSQAATILPVHVYPLPQQMRVAFSAARTS
NFAPGTLDQPIVFDLLLNNLGETFDIHIGRFACPVNGTYVFIFHMLKLAVNVPLYVNLMK
NEEVLVSAYANDGAPDHETASNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQ
D
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttcccagtccccgtatcgccggctctctacagagaagagcatgaagctg
actaggcagcaggaggatgggagccctcctttactgaaaacccttcctgtggtgctgtct
tcagcgaacactcaatatcaggcctacgagacgtacatcgacaatggcctaatatgcctc
aagcacaaaatcaggaatatagagaaaaagaagataaaattgcaagattacagagatcgc
atgaataatggagagatgctaaatccagaccaattggaggcagtagaaaagtatgacgaa
atccttcacaacctagagtttgcaaaagaacttcagaaaacatttgctgcactgaaccaa
gagttattaaaagcacagaagaaaattttgaggcgtgaaactatggtcaaggtggaggct
gaaaagaagaagctatgcacgatctttcaagttcggtacatacttaaaaacatgagccaa
gagcatgtgcagaaagacttccgagccggattaaatggagcgatgtgtttaactacaagt
gaattaggttggcttgtcaagttctcaaagttaacatgcccgaaaagagatgaaagcttg
agtcttgaagatcaaatggaacagttgtccttgcactactgggagcttttggaagccagt
gagaaaagtgttgcaggcaccacctataaaaccctaaaggacataatggctaaaatattg
aattgtggctattttgaaagtattccagcacaccatgttcacgaaaaaattgattttcaa
gaggatatgaaaaaaccacaggctccaactaaaaccaaggcggacaaaacttcagaagct
tctgtgaagtgtatgctgtcaaatgatattcacccatgtgagtttctgaacaggagatat
ttgccagaaggcgactgcattaagaaagagcttgtcaaatcaaaaccttgggactctgat
tacgctggaaagcctcaagctctgcagccttggaacatacttactaaggaggcggaccca
aagatgcatcaaccaattccagttcaaaaccctccaaagcaaagcagggctacgaatttc
attccaaaagaaaaatcctggaaagaaagtattgaccgaaaattgccattacctgttcaa
ggcccgcagtcctcagttcaaggcccgcagtcctcagttcaaggcccgcagtcctcagtt
caaggcccgcagtcctcagttcaaggcccgcagtcctcagttcaaggcccgcagtcctca
gtcccagtaatgcagacaccaaagcaacggggagtaacaaatcttataccaaaggaagtt
ctaagaccgaaagttgaagtcccacccaaagagagaagagagcgccaacaaaaggttgaa
tctgaagtgaatcactctgcaaaaagtgttaatcaggcagatgcagaattttgctccact
tccagtcttccagatgaccctttattaagaagacaaaaacttgaggatctgatgacaaaa
atacaaggaacataccattttatgcaagagtctgttctggattttgatacactttcacaa
aatactactgccatatcactgcaaagtcctccttcagttcctaaagatgaaaaactgact
aaccaatgtggtgcttcactgcagtctgagcagatttgtcttggaactttgactggctca
aatgattccttgaatacaaccgaagacacggtctttgtatctgaaatggatctttctacc
acggagcaagttactgaggttggcctctccctgccaggagagactgagaaccatgctcca
gcaaaggcactatatccaagtgttgtgtctgaaactgagcaacaaaacgaggacaactct
aaagcatgtattcctctgtcaaatgaccaacagaattcgacatcactggctccctcgtcc
tcttccctgtcgccagtatccaaagggctcgcattccagcctccctcggcaaacggcagc
tctgggaatataccttcagcaccatttcaggctgtgcagacacggaaccactatctagca
agtggaaatatgcaaacagccaaaaacatgatggtctttaaggtgaatgcacccttacca
ccacgaaaagagtttgatatgaaagatgagccaccttatcctgtgggctacaatcagtct
tataccacagccagcacccaaaccgggcctcagagtatcttgcagcctactcagattgta
gaacaagcctcctttgtgcaagagtctccatcaggccctggcgcaccagagcatgtggat
ggaagcagaagtcagcggagagccaaggaggaccaagatgtgacccttccttatcaaact
gatggaactattcagatgagtaatggaaatgcctcgttttatcaagcgcaaggcagcaac
tttggtaggagcgctgcaccttacataaactgccggggttcagtcagaggagcaactaga
ggtggaagaggtttagttaattcataccgttcaccaagtggatacaaagtaggttttgat
ggttacagaggagggcctccatcagcgattaatggtaattgtagtcaactgcagtactcc
actcgagagtatcctggaacgcagtatgtacaaagggatggaagttaccaacagggatat
aagcgtggaacatctggtgggcagcgaccaaattcaagaggttggagcgactcctcgcag
atcagcagtccagaaagagaccatgaagtcttccactgcggagactctgggcagggcgac
tcccgcagcctcacaccaatggacatgccagtgaccagccaagctgctactattctacca
gttcatgtctatcctcttccgcaacagatgcgcgtggctttctcagcggctagaacctct
aattttgctcctgggaccttggaccaaccaattgtgtttgatctgctgcttaacaacctc
ggagaaacatttgacattcatattggtagatttgcttgtccagtgaatggcacatatgtt
tttatattccatatgttaaaacttgcagtgaatgttcccttgtacgtgaacctcatgaag
aacgaagaggttctggtatctgcctatgccaacgatggagcgccagaccatgaaactgca
agcaaccacgctgtccttcagctcttccaaggggatcagatatggcttcgtttacataga
ggagccatttacgggagcagctggaaatactccaccttttcagggtacctcctatatcag
gactga
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