Pleurodeles waltl (Iberian ribbed newt): 138287685
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Entry
138287685 CDS
T10800
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138287685 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138287685 (CNOT2)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138287685 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138287685 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
138287685
NCBI-ProteinID:
XP_069084429
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Position
4_1:281283010..281560355
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AA seq
583 aa
AA seq
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MYLSTRGHLMRFAPDEQSLLDKGGLYTDHLSVRPSHQVTNSMFGASRKKILEGVDSDYHD
ENMYYSQSSMFPHRSEKDMLASPSPSSSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLN
RSLSQGNQLPSHVTPTTVSLHTPPSPSRGILPMNPRNMMNHTQVGQGIGIPNRTNSMSSS
GLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSEN
VTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPASEQSQDFSIHNEDFP
ALPGSSYKDPTSNNDDSKSSLSTTGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDG
RVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFAS
PWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAA
VELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKAKEGEGSSH
HQSSLGPTAYCAYKNEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgagcacacggggacacttgatgaggtttgcccctgacgagcagagccttttg
gataaaggtggcctttacacagaccacctttctgtccgtccctctcatcaggtgacaaac
agcatgtttggtgcttcgagaaagaagatactagagggggtcgatagtgactaccatgat
gaaaacatgtactacagccagtcgtcgatgtttccacatcgatcggaaaaagacatgctg
gcatcaccatcaccatcttcatcaggtcaactgtctcagtttggggccagtttatatggg
caacaaagtgctctaggccttcccatgaggggaatgagcaacaacactccccagttaaat
cgcagcttatcacaaggcaatcagctaccaagccatgtaacaccaacaacagtatcactt
catacgccaccttctccaagcaggggcattttgccaatgaatcccaggaatatgatgaac
cacacccaggtgggacagggcattggaattcccaacaggacaaacagtatgagcagttca
ggattaggcagtccaaacagaagctcgcctagcataatttgtatgccaaaacaacaaccc
tctcggcagccttttactgtaaacagcatgtctggatttggaatgaacaggaatcaggca
tttggaatgaacaactccttatctagtaacatttttaatggaacagatgggagtgaaaat
gtgacgggattggacctttcagattttccagcactggcagaccgaaatagaagagaagga
agtggaaatccaacgccattaataaacccattggcaggaagggcgccttatgtgggaatg
gtaacaaaaccagcaagtgagcagtcacaagacttctcgatacacaatgaagattttcct
gcattacctggctcaagctacaaagatccaacctcaaataatgacgacagcaaatctagt
ttaagtacgactgggaagactacctctagtacagatgggccaaaattccctggagacaaa
agctccacgacgcaaaacaacaaccagcaaaaaaaggggatccaagtgctacctgacggc
cgagttaccaacattcctcaaggcatggtgacagatcagtttggaatgatcggtttgtta
acgtttatccgagcggctgaaacagaccctggaatggtacatcttgcgttgggaagtgat
ttaacaacactaggtctcaacctcaactctccagaaaatctatatcccaaatttgcatca
ccgtgggcatcttcaccttgtcggcctcaagatatcgacttccacgttccttcagagtat
ttaactaacatccacataagggataagctggctgcaataaaacttggcagatatggtgaa
gacctactattctatctctattacatgaatggtggagatgttttacaacttttagcagca
gtagagctatttaacagggattggcggtaccacaaagaagaacgagtatggataacgagg
gctcctggcatggaaccaactatgaaaacgaatacttacgaaaggggaacatattacttc
tttgactgtcttaactggaggaaagtagcaaaggctaaagagggggagggttccagtcac
caccagagctcactgggtcccactgcctattgcgcctacaaaaacgagtttcacttggag
tacgacaaactagaagaaagacctcatctgccgtcaactttcaactacaatcctgctcag
caagccttctaa
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