Pleurodeles waltl (Iberian ribbed newt): 138287741
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Entry
138287741 CDS
T10800
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138287741 (SMARCA2)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138287741 (SMARCA2)
Chromatin remodeling factors
BAF complex
138287741 (SMARCA2)
PBAF complex
138287741 (SMARCA2)
GBAF(ncBAF) complex
138287741 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138287741
NCBI-ProteinID:
XP_069084578
LinkDB
All DBs
Position
1_1:complement(810301978..811665947)
Genome browser
AA seq
1611 aa
AA seq
DB search
MSTPTDPGGMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMTTL
GPSDYPPEGMHQMHKSIDGMHEKAMAEEMHCASMKSTSMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQIPPGQQAPMMPGDPQVISQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQTLPENLQLAVQGKRTLPAIQQQPPPPQPPVNYNRPPAMGMHPMG
VPPAGPGPTPGMPLHAASINPKPWTEGQGSELSAPTAPQKPPVPPPSGRPSPAPPPVQPS
SVMPGPSVPQPTPGQPAPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARITHRIQ
ELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRNK
RQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLSKA
VATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVAN
LTNLVWEHKQAQAAKEKKKKKKKKKVEETGERMGSGLGLDGELIDESSQMSDLPVKVIHT
ETGKVLLAPDAPKASQLDTWLEMNPGYEVAPRSDSEESGSEYEEDEEEDSSRVEAEEKRR
IELNVDDVSERDAKTIIETAKQDVDDEYGMQADARESQSYYGVAHAITERVEKQSSLLVN
GSLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP
LSTLSNWQYEFDKWAPTVVKIAYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILA
KIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPT
IFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEK
VEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYI
FQHIEESFAEHLGYSDGLINGADLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTI
MQEYFAFRSFPHLRLDGTTKSEDRAQLLKLFNEPGSQYFIFLLSTRAGGLGLNLQAADTV
VIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA
GMFDQKSSSHERKAFLQAILEHEEQNETLTRSNNTSTSKHNDQLTTSEYMSQKKDDLSGD
NSQEGASQEEDEVPDDETLNQMIARNEEEFELFMRMDLDRRREDARNPKRKPRLLEEDDL
PSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDSMTEKQWLRAIEDGNLDDMEEE
VRVKKRKRRRHIDKDSVKEDLEKAKKKRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDS
TGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSVGDLEKDVMLLCCNA
QTFNLEGSQIYEDSIVLQSVFKSARQKIVKEEEESEDESIDEDDDEDDDESESESKSVKV
KIRLNKKDDKSKGKGKKRQSRAKAKPVVSDYDSDEDQDDNDQSDITGSDDE
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccaacagatcctggcggaatgcctcaccccggtccttctcctggaccaggc
ccttcccctggccctattttagggcctagccctgggcctggaccctcacctggttctgta
catagcatgatggggcctagccctggtccgcccagtgtaccccatccaatgacaaccctg
ggaccatcagattatccaccagaaggcatgcatcaaatgcataagtcaattgatggaatg
catgagaaagcaatggcagaagaaatgcactgtgcctccatgaagagtaccagcatgaga
ccgcctcaccctgggatgggcccacctcaaagtccaatggaccagcacagccaagggtac
atgtctcctcacccatctcctttaggagcacctgaacatgtttccagtccaatgtctgga
ggcggtccaactcctccgcaaattcctcctggccagcaggcacccatgatgccaggagac
ccacaggttatcagtcaaccaaaccgtggtccttctcctttcagtcctgttcagcttcat
cagcttcgagctcagattttagcatacaaaatgctggctcggggtcagactttaccggaa
aaccttcagcttgccgttcaggggaagaggactttgcctgcaattcagcagcagccacca
cctccccaacctccagttaactacaacagaccacctgcaatggggatgcatccgatggga
gttcctccggctggtcctgggccaacgccaggaatgcctctacatgctgccagtataaac
ccaaagccttggactgaaggtcaagggtcagaattaagtgctcccacagcaccccaaaag
cctccagtgccacctccaagtggaaggccatcacctgcacctccacctgtccagccttcg
tctgtgatgcctggtccatctgtgccacagccaactcctggacagcctgcacccatagtt
cagttgcagcaaaaacagaaccgaatcagccctattcagaaaccgcagggtttagacccc
gttgaaattctacaggagagggaatacaggctacaggcccgcatcacgcacagaatccag
gaactagagaacttgcctggatcgttacctccagatttgcgaaccaaagctacagtagag
ctaaaggcactacggctacttaatttccaacggcagttaagacaggaagtagtagcgtgc
atgcgccgtgacacaaccttggagactgctctgaattccaaagcttacaaacgcaacaaa
cgccaaactctgcgtgaagcacgcatgactgaaaaactggagaagcagcagaagatcgaa
caggagaggaaacgcaggcagaaacaccaggaatatctcaacagcattttgcagcatgcc
aaggattttaaagagtatcaccgttctgttactggaaaaattcaaaaactttccaaagct
gtggctacttggcacgccaacactgagcgagagcagaagaaagaaacagagaggattgag
aaggaaaggatgagacgattgatggctgaagatgaagaaggttatcgtaaattgatagac
cagaagaaagatcgtcgtcttgcctacctgttacagcagactgatgagtatgtggccaac
ctgactaatcttgtgtgggagcacaaacaagctcaagctgccaaagagaaaaagaaaaaa
aagaaaaagaagaaggtcgaggagactggcgaaagaatgggatccggcttaggtctagat
ggtgagttaatagatgagagcagtcagatgagcgaccttcctgttaaagttattcacaca
gagactggtaaagttctgcttgcacctgatgcacccaaagcaagtcagcttgatacgtgg
ttagaaatgaatcctgggtatgaagttgctcccaggtcagacagtgaggaaagcggttca
gaatatgaagaggatgaggaggaggattctagtagggttgaagctgaagagaaacgacgg
attgagctgaatgtggatgatgtttctgagagggatgccaagacaatcattgagacagca
aaacaagatgttgatgatgaatatggtatgcaggccgatgccagagagtcccaatcctat
tatggtgttgcccatgcaataactgaaagggtggaaaagcaatcctcacttcttgtgaat
ggttctcttaaacattatcaaattcaaggcttggaatggatggtgtcactctataataac
aatttaaatggaatcttagctgatgaaatggggcttggaaagacaatccagactattgca
cttattacttatttgatggaacacaaaagactcaatggcccatatctcataattgttcct
ctttcgaccttgtccaactggcaatacgaatttgacaaatgggctccgacggtggtcaaa
attgcttacaagggaacaccagccatgcgccgatcacttgttcctcagctgcgttctggg
aaatttaacgtacttctaactacttatgagtacataataaaagacaaacacatccttgct
aagattcgatggaaatacatgattgtagacgaaggacataggatgaaaaaccatcactgc
aagctcacacaagtcttgaacactcactatgttgctcccagaaggatactcctcacgggt
actccactgcaaaacaaacttcctgagctgtgggctctcttgaattttcttctccctacc
atcttcaagagttgcagcacatttgagcagtggttcaatgctccctttgccatgacagga
gagcgggtggacttgaatgaggaggagaccattctgattatcaggcgcctccacaaagtt
ttaagaccttttttgttgagaaggttaaagaaggaggtagaatctcaacttccagaaaag
gttgaatatgtgataaaatgtgacatgtcagctcttcaaaagattctctaccgacacatg
caagctaaggggatacttttaacagatggctctgagaaagacaagaagggcaaaggtgga
gcgaagactcttatgaacacgatcatgcaactgagaaaaatatgcaatcacccgtacatt
tttcagcatattgaggaatcctttgctgaacatttgggctactcagatggtctgatcaat
ggagcagacctttatcgagcctcaggaaaatttgaacttcttgatcgtattctgccaaag
ttgcgagctacgaaccacagagttctactcttctgtcagatgacatcacttatgacaatt
atgcaggaatattttgctttccgtagctttcctcatctgcgtcttgatggtacaacaaaa
tcagaagatcgtgctcaactgttgaagttgtttaatgaacccggttcacagtacttcatc
ttcttactgagcacaagggcaggaggactgggcttaaatctccaggcagctgacacagtt
gttatctttgacagtgattggaaccctcaccaggatcttcaggcacaagatagagctcac
agaattggtcagcagaatgaggtccgagtacttcgattgtgcactgtcaatagtgtagag
gagaagattcttgctgctgcaaagtacaagctgaatgttgatcagaaagttattcaggct
ggcatgttcgatcaaaagtcttccagtcatgagcgaaaggcatttttacaagccatatta
gagcacgaagaacagaatgagacattgacaagaagtaataacactagtacttccaagcat
aatgatcagcttacaacttctgagtatatgagccaaaagaaagatgacctttcaggagat
aattcacaagaaggtgcaagccaggaagaagacgaagttccagatgatgagacattaaat
cagatgattgctcgaaatgaagaggaatttgaacttttcatgcgtatggatcttgaccgc
cgtagggaagatgcacgcaacccaaaacggaagcctcgtttgttggaagaggatgatctg
ccatcttggatcattaaagatgatgctgaagttgaaagacttacctgcgaggaagaagaa
gaaaaaatatttggaagagggtctcgccagcgcagggatgtggactacagtgattcaatg
acagagaagcagtggctaagggctatcgaggacggaaacttggacgatatggaagaggaa
gtgcgggttaagaaacggaaacggcgaagacacatagacaaggattctgtgaaggaagac
ttggaaaaagctaaaaagaaaaggggcaggcctcctgctgagaaactgtcgccaaaccca
cccaaactgactaaacaaatgaacgccattattgatacagtaatcaactataaggacagt
actgggcgacaactaagtgaagtgtttgttcagctgccttctcgtaaagaattaccagag
tattatgaattaatacggaaacctgttgactttaaaaaaataaaggaaagaattcgaaac
cataagtatcgaagtgttggtgatcttgaaaaagatgtgatgttgctctgctgtaatgca
caaacattcaacttggagggatcccagatttacgaagattccatagttttgcaatcagtc
ttcaagagtgcaaggcaaaaaattgttaaagaagaggaggaaagtgaagatgaaagcatt
gatgaagatgatgatgaagatgacgacgagtcagagtctgaatcaaaatctgtgaaagtt
aaaattagactcaataagaaggacgacaaaagcaaaggaaaaggaaaaaagcgccaaagt
cgtgcaaaagcaaagcctgttgtgagtgactatgacagtgacgaggatcaagatgataat
gaccagtcagacataaccggaagtgatgacgaataa
DBGET
integrated database retrieval system
