Pleurodeles waltl (Iberian ribbed newt): 138287796
Help
Entry
138287796 CDS
T10800
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138287796 (PPFIBP1)
Membrane trafficking [BR:
pwl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138287796 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
PUMA_CC
DUF6026
Motif
Other DBs
NCBI-GeneID:
138287796
NCBI-ProteinID:
XP_069084733
LinkDB
All DBs
Position
4_1:409188360..409924590
Genome browser
AA seq
976 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRVLHLMEDLRGLLE
LMEVDEKEGLRCQVPDSTADTLIEWLQSQMTNGHISGNGDMYQERLLRLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLK
LKLTAVEKDRIDYEDRFRDTEGLIQEINGLRLRVSEMENERTQCEKKLKYTKDELASLKD
QLEQKEAEVKRLQERITGKVEGGDLIEKDDNFKKKFKEKNLEVLKLKRAMESLMAANEEK
DRKIEDLRQCLNRYKKVQDMVISAQGKKGKEDESEESMNSGSVSVTLDMQSVTDPEKTPS
PTPLILCTSPEEPNNNAAEEKTLELHTSVLQVTIPSFSTVSKTSEKPTEIMKPLPKAQME
SGVGTPVLQKSDSLDNLKKDAPDTHNKPSTEVSKFGALPPKHPSQTPCVEEDPFGTRKGR
SSFGRGFFKIKTNKRTASAPNLDRSRSASAPTLAESEKGSAERLDISNMPHRETDNSQIS
ASSPESKKKSRGIKKLFGKLKRSQSTTFNPDDDLPAAEFKRGGTRSTAGPRLGWSRDLSQ
ANSDLDMPFAKWTKEQVCNWLRDQGLGMYINNGKQWIVSGQTLLHASQQDLEKELGIKHP
LHRKKLQLALQSLGSEEESNYGKLDYNWVTRWLDDIGLPQYKTQFDDGKVDGRMLHYMAV
DDLVSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENNITPSEVSQWTNHRVMEW
LRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETLAQLLNIPPNKTLLRRHLATHFNLLIG
QEAQQQKQEALESPDYVLLTATAKVKPKKPVFGSFGSLRKKKQEDGEEYVCPMELGHLSG
INSGKGYKPGVDLRLYNDEDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDEMFKDL
SARSPSASITDDDSNV
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgacgcaagtgacatgttggcagctgccttggaacagatggatggcatcata
gcaggatccaaggccttggaatattcaaatggtatatttgactgccagtcgcccacatcc
cccttcatgggaagcctgagagtgctgcatctgatggaagatctgcgtggacttcttgaa
ttaatggaagtggatgaaaaagaaggtttgcgatgtcaggttccagattcaacggccgac
acgttgatcgaatggttgcaaagtcaaatgacgaacggacacatttctgggaatggagat
atgtaccaagaaaggctgttgcgtttggagaacgacaaggaatctcttgtgctgcaggtt
agtgttctgacggaccaagtggaggcgcaaggcgagaagatccgagatctggagttctgc
ctcgaggagcaccgggagaagctgaatgccacagaagagatgctacagcaggaactttta
agtagaacatccctcgaaacacagaaattggatctaatggctgaaatttccaacttgaag
ctaaaattgacggctgtggaaaaggacagaatagactacgaggatcgatttagggatacg
gagggtttaatacaggaaataaatggcctgagattaagagtgtcagaaatggagaacgaa
agaactcagtgtgaaaaaaagcttaagtacaccaaggatgaacttgcttcactaaaagac
caacttgagcagaaagaagcagaggtgaagaggctacaggaaaggataactggcaaagtt
gaagggggagatctaatcgagaaagatgacaattttaaaaagaagttcaaagaaaaaaat
cttgaggtattaaaattgaagagggctatggaatccctaatggctgcaaatgaagaaaag
gatcgaaagatagaagatctgcggcagtgcctgaacagatataagaaagtgcaagatatg
gtaatttcagctcaaggtaaaaaaggcaaggaggacgaaagtgaggaatccatgaattca
ggatctgtttcagtgacactggatatgcaaagtgtgactgacccagaaaaaacaccatct
cccactccattaatcctgtgtactagcccggaagaacccaacaataatgctgcagaagag
aaaacgttggaactccatacaagtgtcttgcaggttacaataccatcattttcaacagta
tccaaaacctctgagaaaccaacagaaataatgaaacctcttcctaaagcacagatggag
tcgggagtgggcacccctgttcttcagaaatcagacagtctggataatttgaaaaaagat
gcaccggatacgcataataaaccttccactgaagtgtccaaatttggagcgctcccacca
aagcacccaagtcaaaccccatgtgtggaagaagacccttttgggacacggaagggcaga
tcttcgtttggacgaggctttttcaaaatcaaaactaacaaaaggacggccagtgctcct
aatctcgatcgcagccgaagtgcaagtgcacctacattagcggaaagtgaaaagggatct
gctgagcgtctggatataagcaatatgccacatcgagaaacagataacagccaaatatct
gcatcttctccagaatcaaaaaagaaatctagaggaataaagaaattatttgggaagtta
aaaaggagtcagtcaaccacattcaacccagatgatgacttacctgcggcagagttcaaa
agaggagggacaagatcaactgctgggccacgattgggctggtctcgagatcttagccaa
gctaacagtgacttagatatgccttttgcaaaatggacgaaggagcaggtgtgcaactgg
ttacgagaccagggtttaggcatgtatataaataatggaaagcagtggatagtatctggc
caaacgttactccatgcatcccagcaggatttggagaaggagctgggaataaagcatcca
ctgcatcggaagaaacttcagctagcccttcagtctctggggtctgaggaggagagcaac
tacggaaagctggattacaactgggtcactagatggctagatgacataggactacctcag
tacaagactcagtttgacgatgggaaagttgatggtcgaatgctacattacatggctgtt
gatgatttggtgtcactaaaagtggttagtgttctacatcatctcagcatcaagcgagct
attcaggttttgcgaataaataactttgagcccaactgtctgcgtaggaggccttctgat
gagaataacatcacgccgtctgaagtttcccagtggaccaatcatcgagtcatggaatgg
ctgcgatctgtcgaccttgcagagtatgcacccaatttaagaggcagtggcgtgcatggt
ggattgatggtattagagcctcgttttaatgttgaaacactggctcagttgctaaacatc
ccacccaacaaaaccctgcttagacgtcatttggcaacgcatttcaacctgttgattggt
caagaagcgcaacaacagaagcaagaagctttggagtcacctgactatgttctgctgacg
gccactgctaaagtgaagccaaagaagccagtatttggaagttttggaagtttgagaaaa
aagaagcaggaagatggagaagagtatgtatgtccgatggaactggggcacttgtccgga
ataaattctggaaaggggtataagcctggagtggatttgaggctatataatgatgaggat
ttggaccggctagaacagatggaagactcagaaggcacagtaaggcaaattggagcgttt
tctgaaggcatcaacaatttgacacacatgttgaaagaggatgaaatgttcaaagatctt
tctgcccgttctcccagcgccagtattacagatgatgactccaacgtgtga
DBGET
integrated database retrieval system
