Pleurodeles waltl (Iberian ribbed newt): 138287906
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Entry
138287906 CDS
T10800
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl02010
ABC transporters
pwl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138287906 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138287906 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwl02000
]
138287906 (CFTR)
Enzymes [BR:
pwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
138287906 (CFTR)
Transporters [BR:
pwl02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
138287906 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
AAA_29
SMC_N
RsgA_GTPase
AAA_21
DUF87
MeaB
MMR_HSR1
AAA_16
T2SSE
nSTAND1
Zeta_toxin
AAA_23
Motif
Other DBs
NCBI-GeneID:
138287906
NCBI-ProteinID:
XP_069085009
LinkDB
All DBs
Position
4_1:complement(538270645..539273216)
Genome browser
AA seq
1489 aa
AA seq
DB search
MQRSPIEKANLFSKIFFRWTKPILKKGYRQRLELSDIYQIPSADSADNLSERLEREWDRE
LATSKNKPKLINALRRCFFWKFFFYGILLYLGEVTKAVQPLLLGRIIASYDPDNTAERSI
AYYLGIGLCLLFFVRMLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISTGQ
LVSLLSNNLNKFDEGLALAHFVWIAPLQVLLLMGLLWDLLQASAFCGLGFLVIMAIFQAW
LGRRMMTYRDKRAGKINERLVITSEIIENIQSVKAYCWEDAMEKLIETIRQSELKLTRKA
AYVRYFNSSAFFFSGFFVVFLSILPHTLTSGIGLRKIFTTISYCIVLRMAVTRQFPWAVQ
TWFDSLGVINKIQEFLQKEEYKTLEYNLTTTEVEMVNVTASWDEGFGEIFEKAKLESNGR
RTSGEDPSVIFSNFPLQVTHVLEDINFKIEKGQMLAVAGSTGAGKSSLLMMIMGELEPSA
GKIKHSGRISFSPQVSWIMPGTIKENVIFGVSYDEYRYKSVIKACQLEEDLSKFPEKDNT
VLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDIFTEKDIFESCVCKLMANKT
RILVTSKLEQLKKADKILILHEGSSYFYGTFSELQNQRPDFSSHLMGFEAFDHFSPERRN
SILTETLRRCSVDGDAALLRTEVRKMSFKQTADFSEKRKNSIINTRKSSRKFSIVQKGPP
QMSDIEEEDQLEAPPRRLSLVPDSEQGEVILPRSNILNTGPTFQGRRRQSVLNLMTRTSI
SQGQSMYKKGSVSIRKVSMAPQSQIASDIDIYSRRLSQDSVLELSEEINEEDLKECFTED
RDTATMTTTWSTYLRYVSSHKNLVFILVLCVVIFLVEVGASLVGLWLIRMHASQNSSTAN
GNISSNVPESLAVLFTSTSSYYIFYIYVGVADTLLALGIFRGLPLVHCLITVSKVLHKKM
LHAVLHAPMSTLNTLKPGRILNRFSKDTAIMDDLLPLTIFDFIQLVLIVIGAITVVSLLE
PYIFLATIPVIIAFILLRAYFLHTSQQLKQLESEARSPIFTHLITTLKGLWTLRAFGRQP
YFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFSAVTFISIATTGDGESRVGIV
LTLAMNIMNTLQWAVNSSIDVDSLMRSVSRVFHFIDLPEEETDKKPKEFKEDKLSSVLII
ENEYAKMKHDWPNGGKMTVKDLSAKYVDGGHAVLENISFSVNPGQRVGLLGRTGSGKSTL
LSAFLRLLLTQGDIEIDGVSWDQISLPQWRKAFGVIPQKVFIFSGSFRKNLDPYGNWSEE
EIWKVAEEVGLKSVIEQFPGQLDFVLLDGGCVLSHGHKQLMCLARSVLSKARILLLDEPS
AHLDPITFQIIRKTLKYAFANCTVILCEHRLEAMLECEYFLVIEENTVRQYDSIQKLMNE
KSFFKQAISQSDRIKLFPLHRRNSSKRMSRPKITALQEETEEEVQETRL
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtcgcccatagagaaggccaacctcttctcgaagatattcttcagatggacc
aaacctattttgaaaaaaggttacagacagaggttggagttatcagacatttaccagatc
ccttcagctgattctgcagataacctttctgaacgactggaaagagaatgggacagggag
ctggcaacatcaaagaacaagcccaaacttattaatgcgcttcgtcgatgctttttctgg
aaattctttttttacggaatccttttgtacctaggggaagttacaaaagctgtgcagcct
ctgctactgggaagaataatagcctcctacgaccccgacaacacggcagagcgatcaatt
gcttactaccttggtatagggctgtgcctccttttctttgtgaggatgttgcttcttcac
ccggccatttttggacttcaccatatagggatgcaaatgagaatagccatgtttagttta
atatacaaaaagactttgaaactatcgagccgggtcctcgataagataagcactggacaa
cttgttagtctcctttctaacaatctgaacaaatttgacgagggtctggctctggctcac
tttgtgtggattgcaccgctgcaagtgctgctgctgatggggctgctatgggacctactc
caagcttcggcattctgcggacttggctttctcgtgataatggccattttccaggcctgg
ctaggacgaaggatgatgacatacagagacaagagagcaggaaagataaacgagaggctt
gtgatcacctcagaaattattgagaacatacaatcagtaaaggcatactgctgggaagat
gccatggaaaagctaattgaaaccataagacaatctgaactgaagctgacccgaaaagca
gcctatgttagatacttcaacagctcagccttcttcttctcagggttttttgtagtgttt
ttatccatcttgccccataccctgacatctggaattggtctgagaaaaatatttaccacc
atctcatactgcattgttcttcgaatggcggtcactagacaattcccttgggctgtacag
acatggtttgattctcttggagtgataaataaaatacaggagtttttacaaaaagaagaa
tataaaacactggagtataatttaacaacaacagaagttgaaatggtgaatgttacagcc
tcctgggatgagggatttggtgagatttttgaaaaagctaaactggagagcaatggcaga
aggacttcgggggaggatccaagtgtcatctttagcaattttccacttcaagtcacccat
gttcttgaagatatcaacttcaaaatagagaaagggcagatgttggctgttgctggctcc
actggcgcaggcaagtcgtctctacttatgatgataatgggagaactggaaccttctgca
ggtaaaatcaagcacagtggcaggatctcattttcccctcaagtctcctggattatgcct
ggaactatcaaggagaacgtcatctttggtgtttcctacgatgaataccgatacaagagt
gtcatcaaagcctgccaactggaagaggacctttcaaagtttccagagaaagacaacact
gttctaggtgaaggtggaataactttaagtggaggtcaacgtgcgcgaatctcattggct
agagcagtatacaaagacgctgacttgtacctcctggactctccctttggctacttagac
atcttcaccgaaaaagatatatttgaaagctgtgtttgcaagttaatggccaacaaaacc
agaattctggtcacctcaaaactagaacagctgaagaaagctgacaagatattaatacta
catgaaggcagcagttatttctatgggacattttctgaactgcaaaaccagcgtcccgat
tttagctcacatttgatggggtttgaagcttttgatcacttcagcccagagagaagaaac
tcaatactgacagagactctccgacgatgctctgttgacggggatgcagcacttttaagg
accgaagtcaggaaaatgtctttcaagcaaacagctgatttcagtgagaaaaggaaaaac
tcaatcattaatacacgcaaatctagccgaaagttctccattgtgcagaaaggtccacca
caaatgagcgatatagaagaggaggaccagctggaagcacctccgaggaggctgtcactt
gtacctgattctgagcaaggggaggtcattttgcctcgcagcaacatcttaaataccgga
cccacttttcaggggcggagaaggcagtctgttctgaacctgatgacccgcacgtccatt
tctcagggccaaagcatgtacaaaaaaggaagtgtgtccatacggaaagtgtccatggcc
ccacaatcccaaatcgcctctgacatcgacatctattccaggcggttgtcacaagacagt
gtcctggaactcagtgaagagataaatgaagaagatctgaaggaatgctttacagaggac
agagacactgccacaatgactaccacgtggagcacatatcttagatacgtctcatctcac
aagaacctggttttcattctcgttttatgtgtggtcatatttttagttgaggttggcgcc
tctctggttggactctggctcattcgaatgcacgcaagccaaaacagttctacagcaaat
ggaaacatcagctccaatgtgccggagtccttggcagtcctattcacaagcacaagctcc
tactacatattttacatctatgtgggtgtggcagacaccctgcttgcactgggaatcttc
cgaggtctgccccttgtgcattgcctcataacagtttcgaaagtgctgcacaaaaaaatg
ctacatgctgttcttcatgcccctatgtccactttgaatactttaaaacctggtcggatt
cttaaccgattctctaaagatacagccatcatggatgatctactaccgcttactatattt
gacttcatacagttggtactaattgtgataggagctattactgtagtttcacttttggag
ccctatattttcctggcaacaatacctgtgatcatagccttcattttactgagagcctac
tttctccacacatctcagcaactgaaacaactggaatccgaagctcgaagcccaattttc
acacacctcatcaccacgttgaaagggttgtggactctgagagcttttgggaggcagcct
tattttgaaaccctctttcacaaagccctgaatttacacacggcgaactggtttctgtac
ctctccaccctgcgctggttccagatgaggatagaaatgatctttgttatcttctttagt
gctgtgaccttcatatccattgcaacaacaggcgatggtgaaagcagagttggcattgtt
ctcactctggccatgaacatcatgaacactttgcaatgggccgtgaactccagtatagac
gtagacagcctgatgaggtcagtcagcagagtgtttcacttcattgacctgccagaagaa
gagactgataaaaagcccaaagaattcaaagaagacaaactatcaagtgttctcatcatt
gagaacgagtacgccaagatgaagcatgactggccaaatggggggaaaatgactgtcaaa
gacctttcagcaaagtatgttgatggagggcatgcggtgctcgagaacatatccttctca
gtaaacccaggacagagggttggtttacttggaagaactggctcagggaaaagtacacta
ctgtctgcctttctgaggctgctgttgacacaaggagacattgaaattgatggagtatca
tgggatcagatctctctacctcaatggagaaaagcatttggagttataccacagaaagtc
tttatattttctgggagtttccgaaagaacctagatccttatggaaattggagtgaagaa
gaaatatggaaagttgcagaggaggttgggctaaagtctgtcattgagcaatttccgggt
cagctagattttgtcctactggatggtggctgtgttctgagccacggtcacaaacaactg
atgtgtcttgccagatcagttctcagcaaagcaagaattttgctccttgatgaacccagt
gctcatctggatcccatcacatttcaaattattcgcaaaactctgaagtacgcatttgca
aactgcacagtgatactctgtgagcacagactggaagccatgctggagtgcgagtacttt
ctggtgatagaagaaaacactgttcgacaatatgactccattcagaaactgatgaatgag
aagagtttctttaagcaggctatcagccagtcagatcgcattaagctgtttccactgcat
cgcagaaactctagcaagcgcatgtccagaccaaagatcactgccctacaagaggaaacg
gaggaagaggtgcaagagacaagactttaa
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integrated database retrieval system
