Pleurodeles waltl (Iberian ribbed newt): 138287960
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Entry
138287960 CDS
T10800
Symbol
HCFC2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138287960 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwl03036
]
138287960 (HCFC2)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138287960 (HCFC2)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
138287960 (HCFC2)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
138287960 (HCFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
NANM
Kelch_FKB95
Beta-prop_TYW4
DUF6242_C
Motif
Other DBs
NCBI-GeneID:
138287960
NCBI-ProteinID:
XP_069085100
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All DBs
Position
4_1:600266953..600485455
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AA seq
681 aa
AA seq
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MAEGPPLNWKRVTSFTGPVPRSRHGHRAVTIRELMIIFGGGNEGIAEELHVYNTATNQWF
LPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKLKPQLPTT
GLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELDLRPGSGVVGWNIP
LNKGTVPSPRESHTAVVYCRKDSRKPKLYIFGGMCGHRLDDLWELDLETITWSKLETKGP
APIPRSLHTSNVIGSKMYVFGGWIPLPAQEVGISAVDSEWKCTSSFSCLNLATLEWKTFT
PDSLEDKKNFPRPRAGHCAVNIGARLYIWSGRDGYKKAMNGQVCCKDLWYLDTEKPPAPS
QVQLIRATTNSFHVKWEEVHMIEGYLLQLNPERSLGTSIPRTLNNELSALTSQGNIAPGR
LHSATQLHQLNSASSYMQGASETDDYMLSANKGSMSEEKNAIHLSGKPHLNERPVAKKGE
KTWCDVGIFKTNTALVNQFYLLPEGHLNISKKVGSADAADYSVLKKQDLLPGSIYRFRVA
AINGCGIGPFSKISEFKTCIPGFPGAPSAVKITKNVDCIHLSWETPSSPSGNILEYSAYL
AIRTTHLLENPLQLVFMKIYCGLKTSCTVTTAQLANAHVDCSSKPAIVFRISAKNEKGYG
PATQVRWLQGASVAATSKQSN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggtcccccacttaattggaagcgggtgacctccttcactggccccgtgcca
cgctcccgtcatgggcaccgtgcggtgaccatccgggagctcatgatcatcttcgggggc
ggcaacgagggcattgccgaggagctgcatgtgtataacactgctacaaaccagtggttc
ctccctgcagtaagaggtgacatcccaccaggctgtgctgcccatggttttgtctgcgat
ggaacaagaattcttgtatttggtgggatggtggagtatggccgatacagtaacgagcta
tatgaactacaggcaagtcgctggctctggaaaaaactgaaaccccagctaccaacaact
ggtttaccaccttgtcctcgacttggccatagcttttctttatatggtaacaagtgttat
ttatttggtggtctggcaaatgaaagtgaagattcaaacaataatgttcccaggtatctg
aatgatttctatgagctggatctgcgaccggggtcaggggttgtgggctggaatattccc
ctaaataagggaacagtgccttctccccgagaatcccatactgcagttgtttactgtagg
aaagattccagaaaacccaagttgtacatttttggaggaatgtgtgggcaccgactagat
gacctctgggagctagacctagaaaccataacatggtcaaaactagaaaccaaaggaccg
gctcctattcctcgcagccttcatacatccaacgttataggaagcaaaatgtacgtgttt
ggtggatggattcctctgccagcacaagaagtgggaatatcggctgtcgacagtgagtgg
aagtgcacaagctcattttcctgtctcaatcttgctacattggaatggaagaccttcacg
ccagactctctggaagacaaaaagaatttcccaaggccaagagctggtcattgtgcagtt
aacattggcgcacgtctttatatttggagtggacgagatggctacaagaaagctatgaat
ggtcaagtttgctgcaaagatctttggtaccttgatactgagaagcctccggctccatcg
caggtccagttgattagagcaaccacaaattcttttcatgtgaagtgggaagaagttcat
atgattgaagggtaccttcttcagttgaatcctgagcgctctcttgggaccagtatacct
aggaccttaaacaatgaattgtcagcgttaacctcccaaggcaacattgctccaggtcgc
cttcacagtgccacacagctacaccaattgaatagcgcatcaagctacatgcagggcgca
tctgaaactgatgattacatgctatctgcaaacaagggatccatgtccgaagagaagaac
gccattcatttatcgggtaaaccacacttaaatgagaggccagttgctaaaaaaggagaa
aaaacatggtgtgatgtggggatttttaaaaccaacaccgcacttgtgaaccagttttat
ttgctcccagaaggacatctgaacatatccaaaaaggtgggcagtgcagacgctgcagac
tatagtgtactgaagaagcaggatcttcttcctggaagtatataccgctttagagtggct
gccatcaatgggtgtgggattggcccttttagtaagatcagtgaattcaaaacatgcatt
cctggttttcctggtgcaccttcagctgttaaaattaccaagaatgtagattgcatccat
ctttcttgggagacgccatcttcccccagtggaaacatcctcgaatattctgcttacctt
gctatccgtacaactcacctactcgagaatccacttcagcttgtgttcatgaaaatttac
tgtggactcaagacctcctgcactgtaacaacagcacagcttgcaaatgctcatgttgac
tgttcctccaagcctgcaattgtcttccggatttctgcaaagaatgagaaaggctatggg
ccagccacacaagttcgatggcttcaaggagcatcagttgcagcaacgtcaaaacaatca
aactag
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