Pleurodeles waltl (Iberian ribbed newt): 138287982
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Entry
138287982 CDS
T10800
Symbol
RPAP3
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138287982 (RPAP3)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
138287982 (RPAP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_14
TPR_17
TPR_9
TPR_19
TPR_BSK1_C
TPR_12
TPR_16
TPR_7
Fis1_TPR_C
TPR_6
ARM_TT21_C
ANAPC3
Motif
Other DBs
NCBI-GeneID:
138287982
NCBI-ProteinID:
XP_069085149
LinkDB
All DBs
Position
4_1:complement(614897822..615164244)
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AA seq
698 aa
AA seq
DB search
MTAALATDPTTAQHRVQASLEDADGVVTVAVMTSPSKALELQLQMRQNAEELQDFLRDLE
SWEKDIKQTDDKLTRESGASDQSLPPIRNRNYKKKVKSKSKLPAKTQIHENVKAAKIKSY
DYEAWDKFDVDKILEDLDKGNSTHESESEDEDGIRVDTEKALAEKNKGNVFFKEEKYDDA
IESYTRGMNADPYNPVLPTNRAAVFCKLKKFAVAESDCNLAIALNRNYAKAYSRRGACRL
ALKNFQGAKEDYERFLELEPNNSEAEDELKKIVQAMTLQENAKLEQPEKQSKRPELTEEE
KKSIAEQQRKQQAITDKDLGNGYFKEGKYEAAIECYTRGIAADGTNALLPANRAMAYLKV
QKYEEAEKDCTQAISLDGSYSKAFARRGTARTALGKLKEAQEDFEIVLKLEPGNKQALTE
LAKIKTELSESGLCRVQECLPPSAIEKQQQHVVKPIDKPPHLRSSKPLRRMIIQEVSDEI
PTTDMPDLSATDQGTLSIGKHTSSIVTDQSSSHDGIVSPCGTPKAKLLKIEDSSNTAILP
QTSGCSLHAASQPCSVKREDKLLLPTVDTAASFEIPPVPANSFQLESDFRRLKGNPDVLY
MYLKQIEPSLYPKLFQKSLDPDVFNQILKILHNFYLGKEPPALVLEILQRLSELKRFDMA
IMFMTESEKKTVSALFSHIEMSGYIESSAENLKKRYGL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgctctagctactgatcctacgaccgcgcagcatcgagtccaagcaagctta
gaggatgctgatggagtagtaacagttgcagttatgacttctccaagtaaagcacttgag
ttgcaacttcagatgaggcaaaatgctgaagaactacaggatttcttacgagatttagaa
agctgggaaaaggacatcaaacaaacagatgacaagcttactagggagagtggtgcatca
gatcagagcttacctccaattagaaacagaaattataagaaaaaagtaaaaagcaaatct
aaattaccagcaaaaacccagattcacgagaatgtgaaagccgccaagatcaaatcctat
gactatgaagcttgggacaaatttgatgtggacaaaatacttgaagaccttgataaaggt
aacagcacacatgagtctgagtcagaggatgaagatggaattcgtgtggatacagagaag
gctcttgctgagaaaaataagggcaatgtgtttttcaaagaagaaaagtatgatgatgca
atagaaagttacaccagaggaatgaatgctgatccatacaatccagtattgccaactaac
agagcagctgtgttttgtaagctaaagaagttcgctgttgctgaatcggattgtaattta
gctattgctctaaacagaaactatgcaaaggcttattctagaagaggagcatgtcggttg
gctttaaaaaactttcagggggcaaaagaggattatgaaaggtttcttgagctggagccg
aacaactctgaagcagaagatgagctcaagaaaattgttcaggctatgaccttgcaagaa
aatgcaaagttagagcaacctgaaaagcaatctaaaaggcccgagctcacggaagaagag
aagaaaagcatagcagaacaacagcggaagcagcaggctatcactgacaaagacttggga
aatggatattttaaagaaggaaaatatgaagcagcgatagaatgttatacacgaggcata
gcagcagatggcaccaatgcactcctaccggcgaacagagcaatggcatatttaaaggtt
caaaagtatgaggaagcagaaaaagattgtactcaagccatatccttagatggttcatat
tctaaagcatttgccaggaggggcacagccaggactgcccttggaaaactgaaagaagca
caagaagactttgaaatcgttttgaagttggagcctgggaataaacaagcattgactgaa
ctggccaaaatcaagacagaattgagtgaaagcggattatgtcgtgtccaggaatgtcta
ccaccttcagcaattgagaagcaacaacagcatgttgtaaagcctatagataagccacca
catctaagatcgtctaaacctctgagaaggatgattattcaggaagtcagtgatgaaatt
cctactactgatatgccagatttatcggctactgaccagggaaccctttcgattggaaaa
catacatcttccattgtaactgatcaatcctccagtcatgatgggattgtttcaccatgt
ggtactccgaaagctaagttgttgaaaatagaagattcctctaacacagctattctacca
cagacttcaggttgcagtttacatgctgcatctcagccttgcagtgtcaaaagggaagat
aaactcctgctgcctactgtagatacagcagcctcctttgagatccctcctgtccctgca
aactcatttcagcttgaatcggatttcagaagattaaagggcaatccagatgtattatac
atgtacctgaagcaaattgaaccttcgttgtatcctaagctatttcagaaatccttggat
cctgatgttttcaaccagattttgaaaattttacacaatttttatcttgggaaagaaccg
ccggctttggtattagaaatcctccaaaggttgtctgagcttaaacgatttgacatggca
attatgtttatgaccgaatcggaaaagaaaactgtgagtgccttgtttagccacattgag
atgtccggatatatagagtcatctgctgaaaatttaaagaaacgttatggcctttga
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