Pleurodeles waltl (Iberian ribbed newt): 138288185
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Entry
138288185 CDS
T10800
Name
(RefSeq) protein NEDD1-like isoform X1
KO
K16547
protein NEDD1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwl03036
]
138288185
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138288185
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
138288185
Microtubules and associated factors
gamma-tubulin ring complex
138288185
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
138288185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_like
WDR90_beta-prop_4th
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
138288185
NCBI-ProteinID:
XP_069085626
LinkDB
All DBs
Position
4_1:807033944..807291808
Genome browser
AA seq
664 aa
AA seq
DB search
MQDIRFATAGEDIKIWDYSSMTVVDQFNPHTSPPGISSLCWSTNNHFLASASASGDKIVV
SSCKSKSVQLFTLAEGEKQTCLHLHSNFQYLVSGGLDNTVNIWELKSRRLHRSLKDHKDE
VTCVRFNGNDGYIASGSTSGEIILHSVTTNLSSAPFGHGSTQPIRHLKYSVIKKSLLGSV
SDSGNVTLWDVNSQNSCHIFDSAHKAPATEICFSPVNDLLFATTGLDKRIIFYDTASKKV
VKAAVAESPLTAVEFLPDGLSVTVGSSRGKIYQYDLRMLTSPVKSVAAHKTSVQSIQFQH
NNIYMKSNSKGQSSRPASILSSAVNKRNSHKGNVTSVGTQNSNMVKDLNSIAATGVLVPC
LPEAEIKGNDFNQDKTGVRRSTSLDVIPSKETDYSKSVELKISDAYGRSSLGDMFSPIRD
DPATYRANEDFTVKGDGLDHLSHVNTLPSIRRNPVGASSQGPYSSPLHIFSGTPIKEEDE
NQDSNSKTKLHHVKPETIDQSIQVKKLSSSNTEVGNVKTPPSSSVNMPWESSEKTAKQVQ
TQLIYDIPSNGISLQSSKITPSVTAGVASSLSEKIVGAIEGDRTSAPLTAIQINFIKNMI
QETVEDVREACHRDIVNLQVEMIKQFHMQLNEMHTLLEKYSVNEGLISEIEKLREENKRL
RTNF
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacatcagatttgcaactgctggtgaggacattaaaatatgggactactcttcg
atgacagtggtggaccagtttaatccccatacttcgcctcctggaatttcctctctttgt
tggagcactaataatcattttctggctagtgcctctgcctctggtgataaaatagtagtt
tcaagctgcaagtccaaatctgttcagctttttactcttgcagaaggagaaaaacagacc
tgcttacatttgcattccaattttcaataccttgtgagtggaggtcttgataatactgtc
aatatctgggagttaaaatctagaagacttcatcgctcccttaaggatcacaaggacgag
gtaacctgtgtaagatttaatggaaatgatgggtacatcgcttctggctctacaagtggt
gaaattattcttcacagtgtcaccaccaatttgtcaagtgctccttttggtcatggcagc
acacagcccattcgacatttaaaatactctgtcataaagaaatctttgcttggtagcgta
tcggacagtggaaatgtaaccttgtgggatgtaaacagtcaaaattcctgtcacatcttc
gacagtgcacacaaagccccagccaccgaaatctgcttttctcctgtgaatgacctacta
tttgcaaccactggtttagataagagaatcattttctatgacactgcaagtaaaaaagtg
gtgaaagctgcagttgctgagtcgccactgactgctgtagaatttttgccggatggactc
agtgtgacagttggatcttcacgaggaaagatttaccagtatgatttgagaatgttgaca
tcgcctgtaaaatctgttgctgcccacaagacgtctgtacagagcatacagtttcagcac
aacaacatatatatgaagtctaatagcaaaggtcagtcaagtagacctgcatctattctt
tcttcagctgtgaataagagaaattctcataaaggaaacgtaacctctgtaggaacccag
aattccaatatggtgaaggatttgaattcaattgcagcaacgggagtattagttccatgc
ttaccagaagctgaaattaaaggaaatgattttaaccaggacaagacaggtgtgcgtcgc
agcactagccttgatgttattccttcaaaagaaacggattactcaaaatctgtggagtta
aaaatcagtgatgcatatgggaggagtagtttaggtgatatgttctctccaatcagagat
gatcctgcgacttatagagcaaatgaagacttcacagtaaaaggagatggtttagatcat
ctttctcatgttaatactttgccttctataaggaggaatcctgtcggtgctagctcacag
ggaccctattcttctccattgcatatatttagcgggactccaattaaagaagaagatgaa
aatcaggattcaaattccaagacaaaattgcaccatgtaaagccagagaccattgaccaa
tcaatacaggttaagaaattgagctcctcaaatacagaggtgggaaatgtaaaaactcca
ccatcatcatctgtaaacatgccctgggaatcaagcgaaaagacagcaaagcaagttcag
acacagttaatctatgacattccatcaaatggcatctcattacaaagttcaaagataacc
ccgtcggtcactgctggagttgccagttcattatcagaaaaaatagtgggtgccattgaa
ggcgacagaacaagtgcaccattaacagcaatccagatcaatttcataaaaaatatgatt
caagagacggtggaggatgtccgggaagcatgccatcgagacattgtaaatcttcaagtg
gagatgataaaacaattccacatgcagttgaacgaaatgcatactttgcttgaaaagtat
tcggtgaatgaaggcctgatctcagaaattgaaaagctcagagaggaaaacaaacgatta
cgaacgaacttttga
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