Pleurodeles waltl (Iberian ribbed newt): 138288311
Help
Entry
138288311 CDS
T10800
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04510
Focal adhesion
pwl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138288311 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138288311 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
138288311
NCBI-ProteinID:
XP_069085922
LinkDB
All DBs
Position
4_1:992559614..993287644
Genome browser
AA seq
1785 aa
AA seq
DB search
MGLLQAPLCGFIVLCLTCLHTQAQEPEFSYGCAEGSCYPATGDLLIGRAQQLTASSTCGL
HKPEPYCIVSHLQEEKKCFLCDSREPYNETYNTDSHQIENVVTTFAPNRLDMWWQSETGL
ENVTIQLDLEAEFHFTHLIMTFKTFRPSAMIIERSSDFGKKWQVYRYFAYDCETLFPGIS
PGPMKKVDDVICDSRYSDIEPSTEGEIIYRVLDPVFRIEDPYSPKIQNLLKITNLRIKFT
KLHTLGDDLLDSRLEIKEKYYYAIYDMVVRGNCFCYGHASECAPVNGYADVEGMVHGHCM
CRHHTQGLNCEQCMDFYHDMPWRPAEGRSSNACKKCNCNNHAVKCHFDMAVYISTGNKSG
GVCDECQHNTMGHNCEKCKPFYYQNPDKDIRDPNICERCDCDPSGSLNGGICDGYSDFSV
GLIAGQCRCKYNVEGERCDQCREGFYELSADNPHGCQSCECNPLGTAPGGNPCDSESGNC
FCKRLVTGKHCDHCLPEHWGLSNDLDGCRPCDCDRGGALNNNCSSETGQCQCRPHMIGRQ
CSQVESGFYFIALDHYTYEAEEAHFGPGVSIVERQHTQDRSPSWTGVGFVRMPEGSYLEF
YVNNIPHSMEYDIVFRYEPQLPEQWEEAVITVIRPGEILTSSRCGNTVPDDDNQVVSLPP
SSRYVVLPRPVCFEKGLNYTIRLELPRYSSLNFDVENPYTLIDSMVLMPHCKSLDIFSMG
GSSDDVMTNSAWATFQRYRCLENSRSVVKTPMTDVCKNIISSISSLMHQGALACECDLQG
SLSSVCDQSGGQCQCRPNVVGRKCDRCATGTFGFGPNGCRPCECNMQGSSHSFCHPVTGQ
CPCVHGAFGRQCDQCLPAYWGFPTCRPCSCNGHAEDCNPYTGECLNCGDHTEGPNCERCL
PGYYGDPLLGSGDHCRPCPCPDGPGSGRQFATGCFQDRSTLHVVCTCNTGYSGARCDECD
SGYFGNLLEAGGFCQRCQCNNNIDMTDPEACDKLSGMCLKCLYHTEGQDCGYCQLGYYGD
ALRQDCRKCVCNYLGTVQEHCSGDGCQCNQTTGQCQCLPNVIGLNCDRCAPNTWKLASGT
GCETCACDASHSLGPSCNEFTGNCRCMPGFGGRTCSECQELYWGDPSSECQACDCDARGI
QTPQCNRTTGLCICNEGVEGPRCDKCARGYSGTFPDCTPCHQCFTLWDTLIQEMSNRTQK
FLQRANDLKVTGVTGPYQETIHTVEEKLKEIKSILAHNPAAQPLENIENLFEEAEKLKTD
VLEKIVYVEKELSALQTNETEAKLTDLQKDAQSLERVVKELADQLEYIKISDFHGAVDSI
NNYYKISVEAEEKVNASTVNPGSFVEQSAAKRQEAEDIITKKLVSFGEQQEEQSRLLDEL
GGKLQSLDLSALSEKTCGNPPGVLCADAKCGGLSCRTDDGERKCGGPDCDGLVTVARNAW
VTAMDFDREILGALAEVEQLSNMVAESKVRADEAKRSAQEILLKTNATKDKVDRSNEDLR
NLIKQIRDFLMQDGADLDSIEVVANEVLSMKMPSTPQQLQNLSDDIRVRVESLSDVETIL
QQSAGDIEKAELLLTEAKQASESASDAKATADIVKEALEEAEKAQISAENAIKKADDDIR
GTQDLLSSIESETAASEETLNNATERLAQLEKNVEDLKKKTMSNTDSAEKITLSVDNVKL
TADDAKKVLDGELNDKFKSVEDLISKNTKESEKGRRKAETLQNEAKSLLASASGKLQLLK
ALEKTYEENQKTLEEKARQLVELEETVRSLLQSISQKVAIYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggggctcctccaggcgccgctatgcggcttcatagtactgtgcctcacgtgccttcac
acacaagcccaggagccagagttcagctatggctgcgcggaaggaagttgctacccagct
acaggcgaccttcttattggccgagcgcaacagctgacggcgtcctccacgtgcggactg
cacaagcccgagccctactgtattgtgagccacctgcaggaagaaaaaaaatgttttctt
tgcgattcaagggaaccctacaatgagacctacaacacagatagccatcagatagaaaat
gtggtcacgacatttgctcccaaccggcttgacatgtggtggcaatcggagacaggtttg
gaaaatgtaacaatccagctggatctggaagcagagttccacttcacccatctgattatg
actttcaagacttttcgcccatctgcaatgatcattgaaagatcatctgattttggaaaa
aaatggcaggtgtatcgatactttgcatatgactgtgagacattgttcccagggatttcg
cctggcccaatgaaaaaagttgatgatgtcatctgcgattcccgatattcagacatcgaa
ccttccactgaaggagagattatctaccgtgtcttggatccagttttcagaattgaagac
ccatacagtcctaaaattcagaatctattgaaaatcactaacttgagaatcaagtttaca
aaattgcacaccctgggagatgacctcttggattcccgcctagagatcaaagagaaatac
tactacgccatttatgatatggtggttcgtggtaactgcttctgttatggccatgccagt
gaatgcgcacctgtgaatggatacgctgacgtggaaggcatggtacatggacactgcatg
tgcagacaccatacccaaggtttgaattgtgagcagtgtatggacttttaccatgatatg
ccttggaggccagctgaaggacgcagtagtaacgcttgtaaaaaatgcaactgcaacaat
catgccgtcaaatgccactttgatatggctgtttacatatcgacgggaaataagagtggt
ggcgtttgtgatgaatgccaacataacacaatggggcacaactgtgaaaagtgcaaaccc
ttctactatcagaacccagataaagatattcgtgatcctaacatctgtgaacggtgtgac
tgtgatccttctggttccctgaatggaggaatttgtgatggttattctgacttttctgtt
ggtctgattgctggacagtgccgttgtaaatataatgtggaaggagagcgctgtgaccaa
tgcagggaagggttctacgaactgagcgctgacaacccacatggatgtcaatcttgcgag
tgcaatcccttgggaacagctcctggggggaatccatgtgattcagaaagtggaaactgc
ttctgcaaacgtcttgttacaggaaaacactgtgaccattgcctgccggagcactggggt
ctcagcaacgatttagatggatgtcgaccttgcgactgtgaccgtggtggagcattaaac
aataattgttcatcagagacaggtcagtgtcagtgcagaccacatatgattggacgccaa
tgtagtcaagtggagtctggattttacttcattgccttggatcactacacatatgaagca
gaggaagcacattttgggccaggagtaagtatcgtggagcgccagcacacccaggatcga
agtccttcctggaccggagttgggtttgtgagaatgcctgaaggatcatatctggaattc
tatgttaacaacattcctcattcaatggagtatgatatagtgtttcgctatgaaccacag
ttgccagaacagtgggaagaggctgtgatcacagtaattcgcccaggtgaaattcttacc
agcagcagatgtggaaataccgttcctgatgatgataatcaagttgtgtctttgccgcca
agttcaagatatgttgtccttccacgaccagtttgctttgaaaagggactgaattatacc
attcgcctagagttgccacgatattcctcattgaattttgatgttgaaaacccgtacaca
ctgatagattcgatggttctcatgccccactgcaagtctctggatatcttcagtatggga
ggttcaagtgatgatgtgatgacgaacagcgcctgggctacttttcagagatatcgatgt
cttgagaacagccgaagtgttgttaaaacgcccatgacagatgtctgcaaaaatataatc
tcgagtatctcttccctcatgcaccagggtgcactggcctgcgagtgtgatcttcaaggc
tccttgagttccgtgtgtgatcagagtggaggacagtgccagtgtcgtcctaatgttgtc
ggaagaaagtgcgatagatgtgccacaggaacatttggttttgggcccaatggatgtaga
ccctgtgaatgcaacatgcaaggatcttcccattccttttgtcaccctgtgactggccag
tgcccttgtgtacatggtgcatttggtcgacagtgcgatcaatgcttacctgcctactgg
ggattcccaacctgcagaccatgcagttgcaacggacatgcagaagattgtaatccatac
actggtgaatgtctgaattgtggagaccacactgaaggtcccaactgtgaaagatgcctt
cctggctattatggagatcctttgttaggatccggggaccactgtcgcccttgcccttgc
ccagatggtccaggaagtggaaggcaatttgcaactggctgttttcaggatcgatctacc
ttgcacgttgtctgcacatgtaacacaggatattcaggagcccgatgcgatgaatgtgac
tctggatattttggaaatctgcttgaggctggaggtttctgccagcgttgccagtgcaac
aacaacattgacatgactgatccagaggcctgcgacaagctttctggaatgtgcctgaag
tgcctctatcacacagagggccaggactgcggctactgtcaacttggttattacggcgat
gcgctcaggcaggactgccgaaagtgtgtttgcaattacctgggtactgtgcaggaacac
tgcagtggagacggttgtcagtgcaatcaaactactggtcagtgccagtgtcttccaaat
gtgattggcctgaactgtgatcgctgtgcaccgaacacttggaaattggctagtggaact
ggttgtgagacatgcgcctgtgatgcttctcattcattgggcccatcctgcaatgagttt
actgggaactgtcggtgcatgccaggctttggaggacgcacttgcagcgagtgccaggag
ctgtactggggtgatcctagttcagaatgtcaagcttgtgattgcgatgccagaggcatt
cagactccacagtgcaatcgtactactggtttatgtatttgtaatgagggagtggaagga
ccccggtgtgataagtgtgcacgtggatactctggtacattcccagactgtacaccatgc
caccagtgttttaccctttgggatacccttattcaagaaatgagtaaccggacacagaaa
tttctccaaagagcaaatgacctgaaagtaactggagtcactgggccttatcaagagacc
atccacacagtcgaagaaaaactgaaggaaatcaaaagcattcttgcacacaatccggct
gcacagcctctggaaaacatagaaaatctttttgaagaagcagagaagctgaaaacagat
gtgttggagaagatagtttacgtagaaaaagagctgtctgcgttacaaaccaatgagacg
gaagcaaagctgactgatctgcagaaggacgcgcagagtctggagagagtggttaaagaa
cttgcagatcaactggagtatattaaaatctctgatttccatggagctgtggatagtata
aataactactacaaaatttctgtggaggcggaagaaaaagtgaatgcatctactgtgaac
ccgggcagttttgtggagcagtctgctgccaagcgacaagaagcggaagacattataact
aaaaaacttgtgagctttggagaacagcaagaggagcaatccaggctcctggacgagctt
ggcggcaagcttcagagtctggacctttccgcactatctgaaaaaacttgtggaaatcca
ccaggagttttgtgcgcagatgcaaaatgtggtggcctgagctgcagaacagatgatggc
gagagaaaatgtggcgggcccgattgtgatggtttggtcacagtggctcgcaatgcatgg
gtgacagctatggactttgatagagagattctgggagctctggctgaagtggaacaactt
tccaacatggttgcagagtcaaaagtcagggcggatgaagccaagcgcagtgcacaagag
attctattaaaaacaaatgcaaccaaggacaaagtggaccgaagcaacgaagacctgcgg
aatctcatcaagcaaatccgtgactttctaatgcaggatggcgcagatcttgacagcatt
gaggtggtcgctaatgaggtgctgtcgatgaagatgccgagtacaccccagcagctacag
aatctgtcagatgatatccgtgttcgtgtcgaaagcctctctgatgttgagaccatccta
caacagagtgctggagacattgaaaaagctgagttacttttgacagaggcaaaacaagcg
agtgaaagtgcctcagatgctaaagccacagctgacattgtaaaagaggccttagaagaa
gctgagaaggctcagatttctgcagagaatgccatcaagaaagcagatgatgacattagg
ggaacccaagacctcctttcatcaattgaatcagagacagcagcttcagaggaaacgtta
aataatgccacagagcgtcttgctcagctggagaagaatgttgaagaccttaagaagaag
accatgtcaaatacagactcagctgaaaagataacactgtcagtggataatgttaaactg
actgcggacgacgctaaaaaggtcttagacggtgaactgaatgataagttcaaatcagta
gaagacctaatatcgaaaaacaccaaagaatctgagaagggcaggaggaaagcagaaact
ttacaaaatgaggcaaaatccttgctggctagtgccagtggtaaacttcagctactcaaa
gctctcgaaaagacctacgaagaaaatcagaaaacgttggaagaaaaagcaagacagcta
gtggaattagaagaaactgtgcgctcactcttgcaatctatcagccagaaagttgccatt
tacagcacttgcttgtaa
DBGET
integrated database retrieval system
