Pleurodeles waltl (Iberian ribbed newt): 138288585
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Entry
138288585 CDS
T10800
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Membrane trafficking [BR:
pwl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
138288585 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138288585
NCBI-ProteinID:
XP_069086190
LinkDB
All DBs
Position
1_1:complement(898008924..899853829)
Genome browser
AA seq
3194 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALSQLDVPFKVKAG
HIGKLDLKIPWKNLYTQPVEAVLDGVYLLIVPVASIKYDAEKEEKQFIEARQRELQRIEE
AKQKVADQEKPKAERQDTFVEKLVTQVIKNLQLRISNIHIRYEDDITNHDCPLSFGVSLQ
NLSLQTSDQNWNPCLHDEKAKLFFKLVRLDNLFAYWNVKSEMFYYKSYSEALNILKYGVA
TNNMIPDDYDFVFRPISAKAKLRMNPRAEFDFSSPKMDFDVNLQDIAIELNKPQYLSVME
LLESIDMMTRNLPYRKFRPDVPLHNNACIWWKYVIKGILEVNVKPNLHMWSWKHIRKHRQ
QVKKYKDLYKIKITTKKPAADNLGQLEVFEKTLDVFNITLARQQAEVEAAKAGLKIYRPG
VKDEDENKGWFGWMWGWSGDCNQTQQETKSGSLEEMMTPEEKDKLCAAIGYSSTAVDPTL
PKSYEAVKLAIQLLSMSISLSEKKDAPKLIKCAISDLSTTLSQRPGGQAIKFEAKIGTFD
VTGAQQGKSVPCLLSSRNVVENSVSLLSLMFETNPLDESADQRLRVESQPLEIIYDAITI
NSLADFFRPPQDVHLEQLTSATLMKLEEFREKTSTGLLYVIETQKVLDLNINLMASYVIV
PQSGFYDSSTNVLILDLGNLKMTSKSRKKLPQLKIGQNSIEDIMSRAYESFDIQLSSMQL
LYSKHSENWKEARKVKRSSQHILEPMDLKVDFSRAMVVTDARMPKFKVYGVLPLLSVCIS
DQKLKGIMELIDSIPKPEAHPSSPQKSQTQKSSLLGTPQAVSRRPVLLELPSSIESDTEE
EFYDAPSSPVDDVTFFDVATGSLSRSGSMRRNRLQKQESLKNMTEFQMRFEIPEVLLQLC
RLSEDTEKPVLQLEILGLGTELNIRTFDMVASSFLREICLKCPEFMDDEKKPVYIITTLD
NCTDDLLTLDYVKADINGPEFKTTYKNVEQLIKVNFSSLDIHLHTEALLSTMNFLNNLIP
QSENKEAAEEEVLDVEEEKKVHKKIITPKKTKFQDVIGLHLCAELECLRIFIRGQKCRIS
EISIEGLDSQVIMRKKATEVLAKLKNIVILDSDEMALYKKAVCITGKEVFSFKMISYVDA
TEGVAYTDMNIVDSHINLVVGCIQIIFVNKFISRILAFVNNFQAAKDALTEVTVQAAEKA
ASGVKEFAQRSFRLALDINVKAPVVIVPQSAVSTNVLVADFGLITVKNQFFIVATKTRCS
LPPVIDSMMVKLSELKLYRTGFDKGSLQKEIEILQPLNLEVTVERNLAAAWYSDIPDIKI
IGQLKPMNLILSQEDLTTILRTLNENLGDTGDPTPTCAPEQKDTGGPSNDANSTSPSGGT
TLVTAAVVETYTPIKVKTTMKLDFQFDSLTLNLHSPNSKQLQVQISDQKVDERAEFSKLA
EFKLGKIVTAVKMLSDGSMNASVKLTNCTLDDKRKDVDKATPRMLELKLGCEKHVMVDVS
YKSGREGTVIDTVVRDIYLCASMEFLLTVADVFVKATEHSSAAQRNAKHTTLTGKEQGVP
VQPVSKMEMNIVVKNPEIVFVADLTRGDAPALVLTTQCELCIKNSPEEQLMTAAVRDLHM
KACPFLPEKRMGNITTVLQPCNLLFQSMQSSSSPQMIELSIEALTLKVSPIIINTVITIT
SALSPAPEAVQELTSPVPPDLWDMKETKDLKLWFLEESYENECESKAEAATRHVPTGETL
KMSIDSIVVTLEAGIGHRTVPMLLAKSSFTGNVKNWSSLINLYCQLDLEVHYYNEMFGVW
EPLLEPLEVEKRDDFRPWTLGIKMKKKSKKQLTESDIDEENYKVPEYKTVINISSKDQMN
IMLSKCGLQMLNNLGQAFAEAASKSSDIFKKDQTPFVIKNSLGLTISVSPSESFTAVNVD
AGAKTIDVNDGDCLNMDYVRGKSETDQFSAMTSLSSKLFYIQLTPLNHSAAEKIPLTKVG
RRIYHVRHNDSGVDRSIICQIETVDGSKIITIRSPMQIRNHFSIEFGIYKDGKLEGTALP
DAEFNIPLALYRSVLSLRPLKDGYEMCDGISFEEIWKHDGALLQKKCQHSKSTGDSLIIN
IVTLKDVLVSSASTEDKFDLPYVIHLWPTVLLRNLLPYEITYSLEENDNSTLTLEDGSSV
QIHNAVLDQTKLALQLLNYLGQNWKGTYNIKSNQPEISFINFTSVSETEKNDLDIAVHVN
YSIGQMVIAIHCPYWMVNKTGRLLQYKADDIHRKHAPDNKKPFLFSFKPKNFFQNNKVQL
MVSDSELSDQFSLDTVGTHGAVKCKGYKMEYQVGVTISASSFNLTRIVIFTPFFMITNRS
QYRLEVAEEGKEKWISVDVEQCIPFWPEKDSNTLLIKVENYMLPPKRILFNKQDSCTLLH
LDNKLGGILVDVNLAEHSTVITFSDYYPGAAPFLLINHTKEEIVEFKQSSSVGKEDKLLP
GKATLYTWEDPAGSRTLNWTCRKQSGEITQILDVVMELLLDGKTVYLVSFFEGLQRIVLF
TEDKSVFKMTCESQKAELAEQEVIIALQDVGISLVNNLTKQEVSFIGITSSDVVWETKPK
KKARWRPMSVKQTEKLEEALKEYNETSPSENKVVELEPNVQACFTPNNVDMKIMQTDTPI
RRNYLPALKVEYSASEHQKSIRVQVYRIQIQNQIPGAIFPFVFYPTKPPKSVTMDSAPKP
FTEVSIVMRSAGHSEITRIKYFKVLIQEMDFKVDLGFLYALADLFTQAGEAPKDQEIELF
KKDVESLQAELSTVSSTDTSQVSLYEYFHISPIKLHLSFSLSTGGEDSNKEERQSELIPV
QSVNLLLKSIGATLTDAQDVVFKLAFFELKFQFCTTQQLQQEVIKHYSKQAIKQMYVLIL
GLDVLGNPFGFFRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGVKALVGGAVGGLAGAA
SRITGAMAKGVAAITMDEEYQQKRREATNKQPSGIKEGITRGGKGLVSGFVSGITGIVTK
PIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATDSSDEVQSLRPPR
FIHEDGVIRPYRLREGSGSQMLQKIENGRFSKYRYFAHAMVNSTDLLMITKSGVLFVTKG
TFGQLTCEWQYTFDEFTKQPFIVSGRRLRIEAKERVKSVFHAKEFGKIINFRTPEEAKWV
LSKLDEMRDFQSKV
NT seq
9585 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtggttgacgtgctaaatcgcttcttaggggactacgtggtg
aatctggacagttcccagctgaagctgggcatctggggaggtgctgttgcgttgaagaat
cttgagattaaagaaaatgcactgagtcagctggatgtaccatttaaagtgaaagcagga
cacataggtaaacttgatctgaagataccgtggaaaaacctttatacccagccggttgaa
gctgttctagacggagtatatttgcttattgttcctgttgccagcatcaaatatgatgcg
gaaaaagaagaaaaacaattcattgaagcaagacaacgagagttacaacgaattgaagaa
gcaaaacagaaagtggcggaccaagaaaaaccaaaagcagagagacaggacacgtttgtt
gaaaaattggtcacccaggtcatcaagaatcttcaattgagaatttccaacattcatatt
cgatatgaagatgatatcacaaatcatgactgtccattatcctttggagtctcacttcag
aatctcagtctgcagacctcggatcagaattggaatccatgtttacatgatgaaaaagcc
aagttatttttcaagcttgtgcgactcgacaacctatttgcttactggaatgtgaagtcg
gagatgttctactacaaaagttacagtgaagctttgaatattttaaagtatggtgttgcc
acaaataatatgattccagatgactatgattttgtattccgcccaatttcagctaaagct
aaactgcgcatgaatcctcgagctgaatttgacttttcttcgccaaaaatggatttcgat
gtaaatctacaggatatagccattgaattaaacaaaccccagtacctcagtgtaatggaa
cttttggaatccattgacatgatgacacgaaacctgccctacaggaagttccgacctgac
gttcccttacacaacaatgcctgcatatggtggaaatatgtcataaagggcattcttgaa
gttaacgtgaagcccaaccttcatatgtggtcttggaagcacattcgaaaacatagacaa
caagtaaagaaatacaaagacctatacaaaatcaagataacgacaaagaaacctgcagct
gataatttaggacagttggaggtatttgagaagactcttgatgtattcaacattactctt
gccagacaacaggccgaggttgaagctgcgaaagccggactgaagatttatagaccagga
gtgaaggatgaagacgagaacaaggggtggtttggctggatgtggggctggtcaggtgat
tgcaatcaaacccagcaagaaaccaaatctggaagccttgaggaaatgatgactccagaa
gaaaaggataagctctgtgcagcaattggatacagttcaacagctgttgatccaacttta
ccaaaatcgtatgaagctgtgaaacttgcgatacaactgctaagcatgtccatatcactc
agtgaaaaaaaagacgcacccaaattgatcaaatgtgcaataagtgatttgagcacaact
ttgtcccagcgaccaggaggacaagctataaaatttgaagcaaaaataggcacatttgat
gtcactggtgcacagcagggaaaatcagtgccctgtcttttgtcatctcggaatgttgtg
gaaaacagtgtgtcactgttgagcctcatgtttgaaacaaatccactggacgagagcgct
gaccagagacttcgagttgaatcccaaccattggaaattatatatgatgcaataaccatc
aatagcttagctgattttttccgaccaccacaagatgtacatctagagcagctgacgtcg
gcaactttgatgaagcttgaagagttccgcgaaaagacttccacaggtttattgtatgtt
attgaaacacaaaaagttctggatttgaatattaatctcatggcttcctatgttattgtc
ccccaaagtggcttttatgattcttcaacaaatgtgcttattctggatcttggtaaccta
aagatgaccagcaaaagtcgaaaaaagctaccccagctgaaaatcgggcaaaacagcatt
gaagatattatgtccagagcttatgaaagttttgatatacagctcagcagtatgcagctt
ctctatagcaaacatagtgaaaattggaaggaagcacgaaaagttaaacgctcatctcag
cacatcttggaaccaatggatcttaaagtggatttcagcagagccatggttgtcactgat
gcaagaatgcccaaatttaaagtttatggtgtgctgcccttactttctgtctgtatatca
gaccaaaaactgaaaggaattatggaattaattgacagtattccaaaaccagaagcacat
ccttcgtctcctcaaaaaagccaaacacaaaaatcctctctacttggcacaccacaagcg
gtatctagacgacctgtcctcctggagctaccttcatctattgaatcagatactgaggag
gaattctatgatgctccgagcagtccagtggatgatgttactttttttgatgtagctact
ggttccttaagcagatctggtagcatgcgaagaaacaggttacagaaacaggaatctttg
aagaatatgactgaatttcaaatgagatttgaaataccagaggtgttgctacagttatgc
cgtctgtctgaagatactgaaaagcccgtgcttcagcttgaaattttgggactggggacg
gaactgaacattagaacgtttgatatggtagcaagttctttcttgagggaaatctgctta
aaatgcccagagttcatggatgatgagaagaaaccagtttatatcattacaacactggat
aactgcacagatgatcttctgacactggactatgtaaaggctgacataaatggaccagaa
tttaagacaacttacaaaaatgttgagcagctaattaaggtcaacttctcctctctggat
atccatctgcatactgaagcacttttgtccaccatgaactttttgaataatcttattccg
caatctgagaataaagaagcagcagaagaggaggtgctggacgttgaggaagaaaaaaaa
gttcataagaaaataatcacaccaaaaaagacaaagtttcaggatgtcataggccttcat
ttgtgtgcagaattggagtgcttgcgaatcttcattcggggacagaaatgcagaatttca
gaaatcagtattgaaggtctcgattcccaagtgataatgagaaaaaaagcaacagaagta
ttagccaaattgaagaatattgtgattttggattctgatgagatggctctgtacaagaag
gctgtctgtatcactggaaaagaagtcttcagttttaaaatgatttcctacgtagatgct
acagaaggtgttgcctacacagatatgaatatagttgatagccatattaatctagtagtt
ggctgcatccagataatttttgtcaacaagttcatttcaagaattttggcttttgtcaac
aattttcaagctgccaaggatgctttgaccgaagtaactgttcaagcagcagagaaagct
gcttcaggtgtaaaagaatttgctcagaggagtttccgtctagcccttgatatcaatgtt
aaagcacctgtagtaattgtaccacagtctgctgtgtccacaaatgtcctagtggctgat
tttggtctcattactgtaaagaaccagttcttcatcgttgccacaaagacacggtgcagc
cttcctcctgtcattgactcgatgatggtgaagcttagtgagctcaaactttacaggacg
ggttttgacaaggggtcattacaaaaagaaattgagatattacagcctctgaatctggaa
gtaacggtagaacgcaatttagctgctgcctggtatagtgacattcctgatattaagata
attggacaactgaagcctatgaatcttatcctcagtcaagaggacctgacaactatctta
aggactttgaatgagaatttaggagacaccggcgaccccactcctacttgtgcaccagag
cagaaggatacaggagggcccagtaatgatgcaaacagtacttccccatctggaggtaca
acattggtgacagctgctgtagtggaaacatatacaccaatcaaagttaaaacaaccatg
aagttggatttccagtttgactccttgacactgaatttacatagtccgaattcaaagcag
cttcaggtccagatctccgaccagaaagttgatgaaagagctgaattttcaaaacttgct
gaattcaaattaggcaagattgttactgctgtcaaaatgttgtctgatggttccatgaat
gcatcagtcaagttaacaaactgcacactagatgacaaacgaaaggatgtcgataaggca
actccaaggatgttggagttgaaactcgggtgtgagaaacatgtcatggtagatgtaagc
tacaagagtggaagagaaggcacggttattgatacagttgttcgagatatttatctttgt
gccagcatggagtttctacttactgttgcagacgtatttgtgaaagccaccgaacacagc
tctgctgcacaaagaaatgccaagcataccacattaactggcaaggaacagggagtgcca
gtccagcccgtgtcaaaaatggaaatgaatattgtggtgaagaatcctgagattgtgttt
gtggcagatttaacaagaggcgacgctcctgccttagtattaacaacacagtgcgaactg
tgcatcaagaatagccctgaggagcaactgatgactgctgctgtcagggacctgcacatg
aaagcatgcccatttcttccggagaagagaatgggtaatataactacggttctacagcct
tgcaatttgttattccaaagtatgcagtctagttccagccctcagatgatcgagctgtct
atagaagcgctaactttgaaggtttcaccaattatcattaatactgtgatcaccatcact
tctgctctgtcaccagcccctgaggcagtgcaagaacttactagtcctgtgccaccagat
ctatgggatatgaaggaaacaaaagatttaaagctatggtttcttgaagaatcgtatgaa
aatgaatgtgaaagtaaggcagaggctgctactaggcatgtccctactggagagacactt
aaaatgtcaatcgactcaattgttgtgacacttgaggctggtattggtcatcggacagtg
cctatgcttttagctaaatcatcttttactggaaatgtgaaaaactggagttcacttatc
aatctttactgccagttggacctagaggtgcattactacaatgagatgtttggggtgtgg
gagccactactggaaccattagaagttgaaaagcgtgatgatttcaggccttggactctg
ggaataaagatgaaaaagaaatctaaaaaacagcttacagaatcggatatagatgaggaa
aattacaaggttccggagtataaaacagttataaacatctcttcaaaagatcagatgaac
attatgctatcaaaatgtggactacaaatgcttaacaatcttggacaggcatttgctgaa
gcagccagtaaatcttcggatatctttaaaaaagatcagacacctttcgtgatcaaaaat
tctttgggactcacaatttcagtttctccaagtgagtccttcactgctgttaatgttgat
gcaggagctaaaacaatcgacgtgaatgatggtgactgcctcaatatggattatgttcgt
ggaaagagtgagacggaccagttctctgcaatgaccagccttagcagcaaactgttctac
attcaactcactcctttgaaccattcggctgctgaaaagattcctttaacgaaggttggt
aggcgcatctatcatgtcagacacaatgactccggagtcgatcggtccattatctgtcaa
attgaaaccgtggatggtagtaaaatcataacgatacgttcccctatgcagattaggaat
catttttctattgagtttgggatttacaaagatggaaaactcgaaggaacagctttacca
gatgctgagtttaacataccactggcattgtatagatcagtactgtctttgcggccattg
aaggacggctatgaaatgtgtgatggaattagctttgaagaaatctggaagcatgatgga
gccttattgcagaagaaatgccaacattctaaatcaactggagattcacttattatcaac
attgtgacattaaaagacgtgttggtatcttcagcatcgacagaggataaatttgatttg
ccctatgtcatccatctctggccaacagtactgctccgcaatctcctgccttatgaaatc
acttattcccttgaggaaaatgataacagtacacttactttggaggatggctcttcagtc
cagattcataatgctgttctggatcagaccaagttggcacttcagttactaaactatctg
ggtcagaattggaaaggaacgtacaacatcaagagtaatcagcctgaaatcagctttatt
aattttacttctgtctcagaaacagagaagaacgatttagatatcgctgttcatgtgaac
tactctattggacaaatggtgattgctattcactgtccttactggatggtgaataaaact
ggaaggttgttgcagtacaaagccgatgacattcaccgcaagcatgctcctgacaataaa
aagcccttcctgttttcattcaagccaaagaacttctttcaaaacaacaaggtgcagcta
atggtgtcggacagtgaactatcagatcagttttctcttgataccgttggcactcatggc
gctgttaaatgtaaagggtataaaatggaataccaagttggtgtcaccataagtgccagt
agcttcaatctcacaaggattgtaattttcacaccattttttatgataacaaatagaagt
caatatagattggaagtagccgaggagggcaaagaaaagtggatctcagttgatgttgag
cagtgcattcctttttggccagaaaaagacagtaatacattgcttattaaagttgaaaac
tacatgttgccaccaaagagaattctttttaataagcaggacagctgcaccttgcttcat
ttagataacaagttgggtggtattctggttgatgttaacctggctgagcattctactgta
ataactttctcggattattatcctggtgctgctccattccttttgattaatcacaccaaa
gaagaaattgttgaattcaagcagagctcttctgtaggaaaagaggacaagcttcttcct
ggtaaagcaactttgtacacatgggaagatccagcaggctccaggacattaaactggaca
tgtaggaaacaaagtggcgaaataactcagattcttgatgtggttatggaacttcttttg
gatgggaagactgtctatctggtttccttctttgaaggcttgcaacgtattgttcttttt
acggaagataagagtgtatttaaaatgacatgcgaaagccaaaaagctgagttggcagag
caagaagtgataatcgctctacaggacgttggtatttcattagtcaataaccttacaaag
caagaggtgtctttcattggaataacaagttcggatgttgtttgggagacaaaacctaaa
aagaaagcgagatggcggccaatgagtgtgaagcagactgaaaaattagaggaagcatta
aaagaatacaatgagacctcaccttcggaaaataaggtagtagagttggagcctaatgtc
caggcttgttttactcccaataatgtggatatgaaaattatgcaaactgacactcctata
aggcgaaattacttgccagctttgaaagtggaatacagtgcctcagaacatcagaagtcc
attagagtgcaagtgtacagaatacagatacaaaaccagatccctggagccatatttccc
ttcgtcttttatcctactaaaccaccaaagtctgttaccatggattcagcaccaaagcct
tttacagaagtcagtattgtcatgaggtctgctggacattctgaaataactcgtataaag
tatttcaaggtcttgattcaagaaatggattttaaagttgaccttgggtttctctatgca
cttgcagatctatttactcaagcaggagaggcacccaaagaccaagagattgaactgttt
aaaaaggatgtagagtcactccaagctgagttgagcacagtatcatcaactgacacatcc
caagtcagcctatatgaatattttcatatttctcctattaagttacatttaagcttttct
ttgagcactggtggagaagatagcaacaaagaagaaaggcaaagtgaactgattcctgtg
cagtccgtgaacctactcttgaagagtatcggagccacacttacggatgctcaagatgtt
gtcttcaagttggcgttctttgaactcaagtttcagttctgcacaacacagcaactacag
caagaggtcattaaacattattcgaagcaggcgattaaacagatgtatgtcctcattctt
ggcctggatgttttgggcaatccatttggctttttcagagacttgtctgaaggtgtggaa
gcatttttctatgaaccctatcagggagcgatccagggccctgaggagtttgtggaagga
atggcgctaggagttaaggcactggtgggaggtgctgttgggggtctggctggtgcagca
tcaagaattactggagcaatggcgaaaggagtagcagccataactatggatgaggaatac
cagcagaaaagaagggaagccacgaataaacagccgagtggcatcaaggagggaattacc
cgtggaggaaaaggcttagtatcgggttttgtcagtggaataactggaattgttacaaag
ccaataaaaggagcacagaaagaaggagccgctggattcttcaaaggtgttggcaaaggt
ttggtgggagcagtggcaaggcctactggtggaattatagacatggctagcagcaccttt
caaggcatcaaaagggctacagatagttctgatgaagtgcaaagtttgcgcccaccacga
tttattcatgaagatggtgtcatcagaccttacagactgagggagggctctggaagtcag
atgttacagaaaattgaaaatggaagattttcaaaatacagatactttgcccatgccatg
gtcaattctactgatctgctaatgataacaaaaagtggtgttttgttcgtgacaaaagga
acgtttggacaacttacctgtgagtggcaatacacttttgacgagtttaccaaacagcca
ttcattgttagcggaagaagactacggattgaagccaaggaaagagtgaagtccgtattt
catgccaaagaatttggaaaaataatcaattttagaactccagaggaagccaagtgggtt
ctttctaagcttgatgaaatgagagattttcagtcaaaggtgtaa
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integrated database retrieval system
