Pleurodeles waltl (Iberian ribbed newt): 138289946
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Entry
138289946 CDS
T10800
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04010
MAPK signaling pathway
pwl04210
Apoptosis
pwl04218
Cellular senescence
pwl04620
Toll-like receptor signaling pathway
pwl04621
NOD-like receptor signaling pathway
pwl04622
RIG-I-like receptor signaling pathway
pwl04623
Cytosolic DNA-sensing pathway
pwl04625
C-type lectin receptor signaling pathway
pwl04920
Adipocytokine signaling pathway
pwl05132
Salmonella infection
pwl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138289946 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
138289946 (NFKB1)
04218 Cellular senescence
138289946 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138289946 (NFKB1)
04621 NOD-like receptor signaling pathway
138289946 (NFKB1)
04622 RIG-I-like receptor signaling pathway
138289946 (NFKB1)
04623 Cytosolic DNA-sensing pathway
138289946 (NFKB1)
04625 C-type lectin receptor signaling pathway
138289946 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
138289946 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138289946 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
138289946 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138289946 (NFKB1)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
138289946 (NFKB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
138289946
NCBI-ProteinID:
XP_069086309
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All DBs
Position
1_1:complement(954160901..954521566)
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AA seq
974 aa
AA seq
DB search
MAGGGGYMDLPHPHNIFDMDPFMNTAFTEPDFHLPDPLLRSADGPYIEITEQPKQRGFRF
RYVCEGPSHGGLPGASSERNKKSFPQIKIHNYVGHAKVVVQLVTSGKDVHLHAHSLVGKH
CEDGICTVTVGPKDMIVGFANLGILHVTKKKVFDTLESRMIEAFRRGYNAGLLIHPDIDY
IPSESGGERPLTDQERDIIRQAAIQQTKDMDLSVVRLMFTAFLPDSNGSFSRRLEPVISD
TIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQIRFYEEDENGGSWEGF
GDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLEISEPKPFLYYPEIKDKE
EVQRKRQKVIPNFSDGYGGGNAGAGGSGMFGSGGGAGASSGGGYGFPVYGYSHYGGLNFH
PGATSTSTGMKHADTSEPCETCVKNEGGEVDNSEDKENVAPNGLVTEIPEHKIEDGAGRV
TSQTEAEVEVDQTDHGFHDCLFLEKAVQLAKRHAAALFDYAVTGEVKMLLAVQRHLSAVQ
DENGDNVLHLAIIHLHAQLVRNLLEVISGGISNDIINMKNDLYQTPLHLAVLTNQADIVE
NLVSAGADIALLDRHGNSALHLAAKEGKANILEILLKHKNVAKIIDLPNGDGLNGIHLAT
MANSMPCLRLMIAARADVNAPEQKSGRTPLHLAVEQENISLAGCLLLEGDAFVDSTTYDG
TTPLHIAAGRGSTKLTALLKAAGADPLIENYEPLYDPEVTQEENQKDEGIVPGTTPLDMA
ANDEIYDILNGKPYESKVAYDDSLAQGDMQTLNEDVKLKLYKLLDVPDAKKNWSTLAQNL
GLGILNNAFKLSPLPSKTLLDNYEVSGGTIAELLDALRLMDYIEAVQIVQESFSSTKIEP
SNEEISGYVPPAVTEQIGEVYVPKVQDDSMCDSGVETSFRKLSVTYSESLTSGPNVEKPK
LPVTTERSVVIHPC
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgggggtggctacatggatttgccgcatccacacaatatttttgatatggat
ccgttcatgaacacagcattcacggaaccggatttccatcttccagatccactactgcga
tcagcagacggcccttacatcgaaatcacagaacagccaaaacagagggggtttcgtttc
cggtacgtctgcgaagggccgtcacacggaggacttccaggagcttctagcgagagaaac
aagaaatccttcccgcaaattaagatccacaattatgtgggccatgcaaaggttgttgtc
cagctggtgaccagtggcaaagatgtacatctgcacgcccacagcctggtgggtaaacac
tgtgaagatggcatttgcacggtcactgtggggccgaaagacatgattgtggggtttgcc
aacctgggtatccttcatgtcacgaaaaagaaagtgtttgacacgttggagtcaagaatg
atagaagccttcagaaggggatataatgcagggctccttatccaccctgacatcgactat
atcccttctgaaagtggtggagaaagaccattaacagatcaagaaagagacattattcgc
caggcagcgattcaacaaacaaaggatatggacctcagtgtggtgcggctcatgttcaca
gcctttctcccagacagcaatggcagcttctcaaggagactggagcccgtcatatccgat
accatatttgatagcaaagcccccaatgcatcaaatttgaagattgtaagaatggacaga
acagcgggctgtgttactggaggggaggaggtctacctactgtgcgacaaggttcagaaa
gatgacatccagattcgcttctatgaagaagatgaaaatggcggttcctgggaaggattt
ggtgacttttcccctacagatgttcacaggcagtttgcgatcgtcttcaaaacaccaaaa
tacagggatgtcaatattacaaaacctgcatctgtgtttgttcaacttcgaagaaaatct
gatctggaaataagtgaaccaaaacccttcctgtattatccagaaatcaaagataaggag
gaagtgcagaggaaacgtcagaaggtgatccccaacttttcagacggctatggaggtggc
aacgctggagctggaggaagtggcatgtttggcagtggaggaggggctggtgccagctct
ggaggtggatatggtttccctgtgtacggttattctcattatggaggattgaattttcac
cccggcgcaacaagcactagtactggaatgaaacatgcagatacgagcgagccatgtgaa
acgtgtgtgaagaacgaaggtggcgaggtagacaacagtgaggacaaagagaatgtggcg
ccaaatggactagtgacggaaattccagagcacaagattgaagacggtgctggtagagtc
acatcgcaaacggaagcggaagtagaagtggatcaaacagatcatggatttcatgattgt
ttgttcctggagaaggctgtccagctggccaagcgccacgctgctgctctttttgactat
gctgtcactggagaagtgaagatgctgcttgccgttcagcgtcatctcagcgccgtccag
gatgaaaatggggacaatgtcctgcacttggccatcatacatcttcatgctcagctcgtc
agaaacctgctggaggtgatatctggtggtatttcaaatgacatcatcaacatgaaaaat
gacctctatcagactcccctgcatctggcggtcctaactaaccaggctgacatagtggag
aatctagtctctgctggcgctgatattgccctcctcgatcgtcatgggaactctgccttg
catcttgccgccaaggaaggaaaggccaacatcttggaaatccttctcaaacacaagaac
gtagccaagatcatcgaccttcccaatggggatggattgaacggcattcacttggcaacg
atggccaacagcatgccctgcctcagactgatgattgcagcgcgagcagacgtcaatgct
ccagagcagaagtcagggcggacaccgttgcatttagcagtggagcaagagaacatctct
ttggcaggctgccttctgcttgagggtgatgcctttgtggacagcacaacatacgatggg
acaactccacttcacattgcagcgggaagagggtcgaccaaactgacagccttactcaaa
gccgcaggagctgacccactaatcgaaaactatgaacctctatatgacccagaagttacc
caggaagaaaatcaaaaagatgaaggcatagttcctggaacaacgccacttgacatggcc
gccaatgacgagatctatgatatattaaatgggaagccatatgaatcgaaagtggcctac
gatgactctttagcacaaggagacatgcaaactctcaatgaagatgtcaaattgaaactg
tacaaattgttagacgtacctgatgctaagaagaactggtcgactctagcacaaaacctg
ggtctaggaatactaaacaacgcctttaagttgagtcccctgccatcaaaaaccctttta
gacaactatgaggtatctggcggtacaatagcagaacttttagatgccttgagacttatg
gattatatagaggccgttcaaatcgtccaggagtccttctctagcaccaaaatcgagccc
agcaatgaggaaatatctggttacgtccccccagccgtcacagaacagataggtgaagtg
tatgttcccaaggtccaggacgatagcatgtgtgacagtggtgtggagacatcttttcgg
aaactaagcgtgacctattcagagtctctgacaagtgggcctaatgtggagaagccaaag
ctgccagtgactacggaaaggagcgttgtaatacacccatgctga
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