Pleurodeles waltl (Iberian ribbed newt): 138290613
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Entry
138290613 CDS
T10800
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138290613 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138290613 (HERC3)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138290613 (HERC3)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
HECT type E3
138290613 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
138290613
NCBI-ProteinID:
XP_069086357
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All DBs
Position
1_1:981414693..981866752
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AA seq
1050 aa
AA seq
DB search
MLCWGHSAFGQLGIGHEHQMFASKPQTCGFFRGRRIKEVACGGYHSAFLLEGGEIYTCGL
NSKGQLGHYSDGKEPEQVEALAGEDIVHVACGELHSLAVSSNGQIFSWGASSEGQLGHAT
MEVSVSIPRFIRKLNQQKILQVSCGSWHCLALADDSQLFTWGQNSHGQLGLGEAFESQSS
PQRVKSLEGIPLAQVTAGGFHSFALSLSGAVFGWGKNDAGQLGLNDEQDRASPCHVKPLR
TQKVVYISCGQEHTAILTKAGGVFTCGAGDCGQLGHDSLNNEINPRRVLELMGSEVSQIA
CGRQHTLAFVPSSGLIYAFGCGTRGQLGNGHLSNVKCPSLVKGHWVAHTGHIQDRADSCA
YHIVKRIFSGGDQSFVLCSRYGNPMPADDFRFINHSTYTSVINDETIDVWRRKVAEYSGS
NSVNSVVQTLSSSACWNGSFIEKKNDEHFKTSPKFPGISLNSIRVLFEKLMSSHHSRLLE
QILKSFETFLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKHYITLTLPLAMAILRLDTNP
SKVLDNWWSQVCPSYFFKLVDLYKAAVVYLLNGRKTLLIPVLFTSYITAALRLLEKLHKV
NMKAGHVEYDKFYIPEVSSLVDIQEDYLLWLLNQAGMKVRPASLQDSVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARNPFMVLHVRRSNLVGDALRELS
IYSDIDFKKPLKVIFDGEEAVDDGGVTKEFFLLLLKELLNPIYGMFTCYTDSNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLATLPDLEDLKELSPTEGRSLQQ
LLDYAGEDVEEVFCLNFTICRVNYGVTEIKMLVPGGDKITVTNNNRQEFVTAYVNYVFNH
SVEESFAAFSSGFLKVCGGKVLELFQPSELRAMVVGSNNYNWQELEECAIYKGEYSAVHP
TVRLFWETFHNFPLEQKKKFLLFLTGSDRIPIYGMSSLRIIIQSTSCGEEYLPVAHTCYN
LLDLPQYRSKETMKAQLTKAIDHCEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctggggacattcagcttttggacagcttgggattggccatgaacatcagatg
tttgcgagcaagccccagacatgtggatttttccgtggcaggcgtatcaaggaagtggcc
tgtggcgggtatcattctgccttcctgctggagggtggtgaaatctacacctgcggtctg
aacagcaagggtcagcttggacactacagcgatggaaaagaaccagaacaagttgaagcc
ttggcgggagaagacattgtccatgttgcatgcggagagttgcatagcttagcagtcagc
agcaatggtcagatcttctcttggggtgcaagcagcgaaggacagcttggacatgcaacc
atggaagtatcggtctctataccaagatttataaggaagctgaaccaacagaagatactc
caggtttcctgtggcagctggcattgcttggcccttgcagatgatagccagctttttacc
tggggccagaacagccatggccagcttggtctgggtgaagcattcgaatctcagtctagc
cctcaacgtgtgaaatctctggaggggatcccactggctcaagtcactgctggaggtttt
cacagctttgccttgtctctctccggggctgtctttggatggggaaagaatgatgctgga
cagctgggattaaacgacgaacaagatcgagcgtctccatgccatgtcaaacctttgcgc
acccagaaggttgtttatatcagctgtggtcaagaacatacagccatcttaacaaaggct
ggtggtgtgtttacctgtggagctggtgactgcgggcagcttggacatgactcattaaac
aatgaaataaatcctcggagagttttggagctcatgggcagcgaggtctctcagattgct
tgtggcagacagcacactctcgcctttgtgccttcttcaggattgatctatgcatttggc
tgcggaaccagaggccagttgggtaacggacacctctctaatgtcaagtgtccatcattg
gttaagggacactgggttgcacatactggtcatatccaagaccgagctgattcttgtgca
tatcacattgtcaaacgcatcttctctgggggagaccagtcttttgtactttgctccaga
tatgggaaccccatgcctgcagatgatttccgcttcatcaaccattccacttacaccagt
gtaataaatgatgaaacaatagatgtttggcgacgaaaagtagcagaatacagcggctcc
aattcagtcaacagtgttgttcaaaccctatcctcctcagcctgctggaatggaagcttc
atagagaagaagaatgacgagcattttaagaccagtccgaaattccccggtatcagcttg
aattctatcagagtgctgtttgaaaaactcatgagctcccaccattccagactgctagaa
cagatccttaaaagctttgaaacgttcctgattcctcagttgtctagttcccctcctgat
gttgaagcaatgagaatttatttaatccttcctgagtttccgctgcttcaggactccaag
cactacataacactaacacttccattggcaatggccatacttcggcttgacaccaacccc
agcaaggtccttgataactggtggtcacaagtgtgtccaagctacttctttaagctggtt
gatctctacaaggctgctgtggtgtacctgctaaatggaagaaagacgctgctgatccct
gttctcttcaccagctacatcactgctgctctcaggctactagagaaattgcacaaggta
aatatgaaggcagggcatgttgaatatgataaattctacatcccagaggtttccagcttg
gtggatatccaggaagattacctcttgtggcttctaaaccaagcaggaatgaaagttcga
ccagcaagcttgcaggattctgtgacactctgctcttatcctttcatctttgatgctcaa
gccaagaccaaaatgctgcaaacagatgctgagctgcagatgcaggtagctatcaatgga
gctaatttacaaaatgtcttcatgcttctcaccttggagcctctgctagccaggaatcct
ttcatggttctccatgtccgcaggagcaatcttgttggtgacgctttgagggaactaagt
atttattcggacatcgactttaagaaacctttgaaagtaatctttgatggtgaggaagct
gtggatgatggtggagtgacaaaggaattcttcttgctgctgctaaaagaactgcttaat
ccaatctatggaatgtttacatgctacactgattccaacttgctctggttttcggataca
tgttttgtagagcacaactggtttcatttgattggcatcatatgtggattggcaatctac
aacttcactgtagtggacctgcacttcccattggccctctacaagaaactattggcgaca
ttgcctgatttagaagacttgaaagagctctcccccacggaaggaaggagccttcagcag
cttttggattatgctggtgaagatgtagaagaggttttctgtcttaacttcacaatttgc
agggtcaattatggagtgactgaaattaagatgcttgtgcccgggggagacaaaattact
gtgacaaacaataacaggcaagaatttgtaactgcctatgtgaattatgtcttcaatcac
tcggtggaagagtcgtttgcagcattctccagtggtttcttgaaggtgtgtggtggaaag
gtgctggaactcttccagccatccgaactgagagctatggtcgtggggagcaacaactat
aattggcaagaactagaggagtgtgcaatatataaaggtgaatattcagctgtacatccg
acagtgagacttttctgggagacatttcacaactttccactggaacagaaaaagaagttt
cttttatttttgactggcagtgaccgcataccaatatatggcatgtccagtttacgcatc
atcatccagtccacctcatgtggggaggagtacttgccggtagcgcacacctgttataac
ctgctggacctgcctcagtacagaagcaaagagacaatgaaagcccagctgacgaaggcc
attgatcactgcgaaggcttcagcttagcctaa
DBGET
integrated database retrieval system
