KEGG   Pleurodeles waltl (Iberian ribbed newt): 138292142
Entry
138292142         CDS       T10800                                 
Symbol
SKIC8
Name
(RefSeq) superkiller complex protein 8
  KO
K12602  WD repeat-containing protein 61
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    138292142 (SKIC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pwl03019]
    138292142 (SKIC8)
Messenger RNA biogenesis [BR:pwl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     138292142 (SKIC8)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C eIF2A Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_DCAF4 Tricorn_2nd Beta-prop_WDR41 Beta-prop_HPS5 PROPPIN NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Cytochrom_D1 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd WDR54 Beta-prop_DCAF12 WD_LRWD1 WD40_like Beta-prop_IFT122_2nd Vgb_lyase Chorion_S16 Nucleoporin_N DUF2415 Nse4-Nse3_bdg
Other DBs
NCBI-GeneID: 138292142
NCBI-ProteinID: XP_069086649
LinkDB
Position
4_2:40646228..40686392
AA seq 305 aa
MSTQYSILFKQEQAHDDAIWSVAWGKSSKDHTETVITGSLDDLVKVWRWADERLDLQWSL
EGHQLGVVSVGINHTGSLACSSSLDAHIRLWDLENGKQIRSIDAGPVDAWSLAFSPDSQF
VATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVVSVAF
CPDDAHFVSSSSDKSVKVWDVASRTCSHTFFDHQDQVWGVQYNSNGSKIVSVGDDQEIHV
YDCPI
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcactcagtatagtatactcttcaagcaagagcaagcccatgatgatgccatttgg
tcggtggcctgggggaaaagctccaaagaccacacagaaacagtaatcactggttcactg
gatgatctggtgaaagtttggagatgggctgatgagcgcctagatctgcagtggagcttg
gaaggtcatcagctgggcgtagtgtcagtgggcataaatcacacagggagcctagcgtgt
tccagctctctggatgcccacatccgtctctgggacctggaaaatggcaagcaaatccgt
tctattgatgctgggcctgttgatgcctggtcgctggctttctcaccggattctcagttt
gtagcaacaggaagccacgtgggtaaggtcaacatttttggtgtggaaacaggaaaaaaa
gagtattctttggacacccgaggaaagttcatcttgagcatcgcatatagtcctgatgga
aagtacttagccagtggagccattgatggcatcatcaatattttcgacatagcgactgga
aaactcctccacacgctggaaggacacgctatgcccattcgatcgctgacattttctcca
gactctcagttgctggtcacggcttcggatgatggatatatcaagatttacgatgtgcag
catgccaacctggcagggacccttagtgggcatggatcctgggtagtaagtgtggcgttt
tgtccagacgatgcccactttgtctccagttcatcggacaaaagtgttaaggtgtgggat
gttgcttccaggacgtgtagccacactttctttgatcatcaggatcaggtttggggcgtg
cagtacaacagcaatggttcaaaaatcgtgtctgtcggagatgaccaggagatccatgtc
tatgactgcccaatataa

DBGET integrated database retrieval system