Pleurodeles waltl (Iberian ribbed newt): 138292325
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Entry
138292325 CDS
T10800
Symbol
LIMA1
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138292325 (LIMA1)
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
138292325 (LIMA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
C1_4
Motif
Other DBs
NCBI-GeneID:
138292325
NCBI-ProteinID:
XP_069086975
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All DBs
Position
4_2:109086276..109269787
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AA seq
967 aa
AA seq
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MEASPFKRGQWSSQSLRVTARELSLVNKKSSSLLERFSKYQKAAEDASTDKKKANTENLP
LNFRRGALSVLKKRWENPVVQPLPPKEATRTVPPEVRPRLSSPGAPCEKSPSSSADFTPR
PAVSPAAGARGRFIYPSTEAASSPLLSQSMEDHLKDGLEEERSTAQVEGTEPSTKIEKYN
VPLTNLKMMFEKGEAGHQKPIHREPIIISPGRRVSENSQSSEDYDLDAENNLGHLGPLTG
NAQRTSPAKGLTRNSLERGSLRDRMAKYQAAVSKQSSSSAPKNDLRSSSNCIRSHKLQQK
ENVPPEPTGTPPSEDPPLEGSVASSPLQVSISPSTPPSQDNLLPESVASSPSNVSVPGSA
GSPSSKDSVSLKLKDATQSQEITVPESVNSLSLQEKDMPQNVSSPPPKEKMGSGFLGSTP
LQDVSQRVAGTLLLQEGMSLQSQSKTQSQANVPQRSDSLMLSEECALLSPSNSLTYKEHV
PVDSSSIQPSKESASPGSGDVQLYRDNVQQGSEGSLLFGDLDKVFVLENGPSACRNATDH
NSTSKGEQLKSPGSDPQNPSFLETCQPEITPPKVIKKFQLPAREVCVGCQKTVYPMERLY
ANQQVFHNSCFRCSHCNSKLGLVNYASLHGNIYCKPHFNQLFKSKGNYDEGFGHKQHKEL
WTDKSENEDVPENPACAASESESSHNPGVEDAPIAKVVVLAASMEAKAAVSVEKEKQPET
KKLRIAWPPPPEPTSPGSTSDESIKVFKPKWPPSDEIIKEDVKEDGDLKKLRRSSSLRER
SRPFTVAGGVKPVVTVRNRKEPEREGVSSASKKARSLSGDEDETMKHPSREQMENEEINI
DTSIVENHKEVAAVTQEARDVQQGGESDEMKDKNLLANGEVIGNYSVAAALAVNLNMSPK
DDSNHKPFSHESTEDRCTKELSPSQDRRSQDIGFWEGEDSEELSVEELIKRNRCYEDDDD
EDDEAED
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttcaccatttaagagagggcagtggagctctcagtctttacgagtcaccgcc
agagagctttctttggtgaacaagaagtcatcttcacttctcgagcgcttctccaagtat
cagaaggctgcagaagatgccagtactgacaagaagaaagctaacaccgaaaacctcccc
ctaaactttaggaggggggccctgagcgtgctgaagaagcggtgggagaacccggtggtg
cagccactgccgccgaaggaagctacccgaactgtcccgcctgaggtccgaccgaggctt
agcagtcccggggcaccctgtgagaaaagcccctcttcctcggcagacttcaccccgaga
cccgctgtcagccctgcggccggagcccgcggacgcttcatctacccgagcacagaggcc
gccagctcaccactgctcagccagagcatggaggaccacctgaaagatggtctggaagag
gagaggagcacagcccaagtggagggcactgagccgtccacaaagatcgaaaagtacaat
gtgcccctcaccaacctgaagatgatgttcgagaagggagaagcgggccaccaaaagcca
attcatcgagagccaatcataatttcacctggaagaagggtatctgaaaacagccagtca
tccgaggactatgatcttgatgcagagaataatcttggacacttgggccctttgactggc
aatgctcaaagaacaagccctgcaaagggtttgaccaggaacagcctggagaggggctcg
cttcgggaccgaatggccaaatatcaggcagcagtatccaagcaaagcagttcatctgct
cctaagaatgaccttcgaagcagcagcaactgtattcggagccacaagctgcaacaaaag
gaaaatgtacctcctgagcctactggcacccctccttctgaagaccctccactggaaggg
tccgtggcttcttcaccgttacaagtgagcatcagtccaagcacaccaccatcccaggac
aatttgctgccagagtctgtggccagctcaccttcaaatgtgagtgttccaggctctgct
ggttcaccatcctccaaagacagtgtgtcactcaagctaaaagatgcaacacaatctcaa
gaaattactgtgcctgagtccgtgaactcattgtctctccaagagaaagacatgccccag
aatgtgagctccccgccacccaaagagaaaatggggtctggatttctgggcagtacaccg
cttcaggatgtgtcgcagagggttgcaggtaccttgctattacaagagggtatgtcactg
caatcacagagcaaaactcagtcccaagcaaatgtgccacagagatcagacagcctcatg
ttatctgaggagtgtgctctgctgagcccttcaaactccctaacttacaaggagcatgtg
ccagtggactcctcttctattcagccttccaaggagagcgcatcgccaggctctggtgat
gtgcaactttacagggacaacgtgcagcagggctccgaaggatctctcctttttggtgat
ctggataaggtctttgtattggagaatggcccgtctgcttgtaggaatgctaccgatcac
aatagcacaagcaaaggtgaacagctgaagtctccaggttcagacccacaaaacccttct
tttctggagacctgccagccagagatcactcctccgaaagtaatcaagaaatttcagttg
cctgccagggaggtctgtgttgggtgccagaagaccgtgtacccaatggaacgactgtat
gccaaccagcaagtgtttcacaacagctgcttccgttgttctcactgtaacagcaagctc
ggcctcgtgaattatgcctcgctccatgggaatatctactgcaagcctcatttcaaccag
ctcttcaaatccaaaggaaactatgatgaaggctttggacacaagcagcacaaagaactg
tggactgacaaaagcgaaaatgaagatgttcctgagaatcctgcatgtgctgcgagcgaa
agtgaaagctctcataatcctggggtagaggatgctcccattgcaaaagtggttgtttta
gcagcatccatggaagccaaggcagcagtgtcggtagaaaaggaaaagcagccagagacc
aagaagctgcgaattgcatggcccccaccaccagagcccaccagcccaggaagcacctct
gatgagagcattaaagtgtttaaacctaagtggcctccaagtgatgagataatcaaggaa
gatgtcaaggaagacggagacctgaagaagctgcgaagaagctcctccttgagagaaaga
agtcgaccctttactgtagcgggtggtgtaaagccagtggtgactgtgcgtaaccgcaag
gagccagagagggaaggcgtgtcttcagccagtaagaaagctaggagcctatctggagac
gaagacgagaccatgaaacacccaagcagagagcagatggaaaatgaagaaattaatatt
gatacctcgatagttgagaaccataaagaagttgcagcagtcactcaggaagcacgagat
gtacaacagggaggggagagtgatgaaatgaaagataaaaatcttctggcaaatggagaa
gtgattgggaactacagtgtggcggcagcccttgctgtgaatctgaatatgtcacccaaa
gacgattccaaccataagcctttttctcatgaaagtacagaggacaggtgcaccaaggag
ttgtccccaagtcaggatcgcagatcccaagatattggcttctgggaaggtgaagacagt
gaagaattatccgtggaagaactcattaaaaggaatcggtgttatgaggatgatgatgat
gaagacgacgaggcggaagattga
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