Pleurodeles waltl (Iberian ribbed newt): 138292389
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Entry
138292389 CDS
T10800
Symbol
AAAS
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138292389 (AAAS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138292389 (AAAS)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138292389 (AAAS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
eIF2A
PD40
WDR90_beta-prop_4th
EIF3I
Motif
Other DBs
NCBI-GeneID:
138292389
NCBI-ProteinID:
XP_069087059
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Position
4_2:complement(135896982..136155418)
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AA seq
601 aa
AA seq
DB search
MCACDLSLVPARDPNPAWIVLLEAETSRPLKVVVCWQILPGGRGLSAEQQDRFRWWSAGE
FFPGPVNFLQNNRTGFVTEETEMCTLDLFRPPVPEGEVTLYEYNNELVPGASYMSPPAAF
QAQGVNLPVLVIPKESLKPHGRLEHSTKAAFIHHRETIWKRCLNAWQDVGLSGLLDEITN
SEEEVQTWLRKSSRWALTLCRWVSSFHGSLFPHLSMRSEDMIAEFSQAMDWSGCSLRAFA
WHPHTNKFALALLDDYIRVYNTTSATVPTLKHRLQKNVASLAWKPLCASVLAVACQSCVL
VWHVDPTSLSTRPSSGCTQVLSHPGHSPVTSLAWSPGGEMLLSASPVDTTMLVWDVSTEN
CVPLQRVGGGGVTFLSWSPKGSKVLAAAPTGVFRVWETQTWTCERWPTLKGRCQTGCWSP
DGNRLLFTVQGETVIYSLSFSDGCGTLQGQVGGSKAASIVADLSETIFETNGGELRVGGE
VHSMSWDPTGERLAVIIKGNPKEEQSRAVIAVFRTRNSPVFELLPCGFVQGEEGAEPQII
SFHPSFRKGALLTTCWSTGRVSHVPFYFVNAQVPRYSPGFSPGVARSGTNGGAMSELFSE
M
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcatgcgatttaagtcttgttccagcgcgcgatccgaatcctgcctggatagta
ttgcttgaagcagagacttcgcgacccctcaaggtggtggtctgctggcaaattcttccc
gggggccgtggactctcggcagaacaacaggacaggtttcggtggtggtctgctggcgaa
ttcttcccggggcccgtgaactttctgcagaacaacaggacaggtttcgtgactgaggaa
acagagatgtgtactctggatctgttccggcctcctgtacccgaaggagaggttactttg
tatgagtataataatgaactggtgcctggtgccagctacatgagtccacctgctgccttt
caagctcagggtgtaaatctgccagttttggtgatccccaaggaaagtctgaaaccgcat
gggcgtctggaacacagcacaaaggcagcttttattcaccaccgcgagaccatttggaag
cgatgcctcaatgcttggcaagacgtggggctctccggcctgctggatgagatcacaaac
tcggaggaggaagtgcaaacctggctgcggaaaagctcgcgatgggcgctgacactttgc
cgctgggtttcctctttccatggctcactcttcccccacttgtcgatgcgaagtgaagat
atgattgcagaattttcacaggctatggattggtccggttgctccttgcgggcttttgct
tggcatccgcacaccaacaaatttgcactggcattgctggatgactacattcgtgtttac
aatacaactagtgcaacagtccctaccctgaagcatcgcctacaaaagaatgtggcatcc
ctggcttggaagccactctgcgcctctgtcttggctgttgcgtgccagagttgtgtgctg
gtctggcacgtggatcctacctccctgtccacaagaccatcctctggctgcacccaggtg
ctttcccacccaggtcacagtcctgtcacaagcttggcttggtcccctggtggtgaaatg
ctgctttccgcctctcctgttgacactaccatgcttgtgtgggatgtatctacagagaac
tgtgtgccgctgcagcgagttggagggggtggagtcacattcctgtcttggtcacccaag
ggcagtaaagtactggcagccgctcccacaggtgttttcagggtttgggagacgcagaca
tggacttgtgagcggtggcctactctaaaaggacgctgtcaaacaggatgctggagccca
gatgggaaccgtttactattcacagtccaaggcgaaaccgtcatttactccttatctttc
tcagatggatgtgggactttacaggggcaagttggtggatcaaaagcagcctccatcgtt
gctgacttgtcagaaactatatttgagacgaacggcggagaactgagagttggtggagaa
gtgcattcaatgtcctgggatcccactggtgaacggctagctgtcatcattaaagggaac
ccaaaagaagagcaaagccgtgcggtgattgctgttttcagaacacggaacagtccagtg
tttgagctcctcccatgcggctttgtgcagggcgaagagggagcggagccacagattatc
agttttcacccctctttccggaagggggcgctcctcaccacgtgctggtccacaggacgc
gtcagccacgtacccttctatttcgtcaacgcacaagtgccgcgttacagccctgggttc
agccctggtgtcgccaggagcggcaccaacggaggagccatgtctgagctgttctcggag
atgtga
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