Pleurodeles waltl (Iberian ribbed newt): 138292403
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Entry
138292403 CDS
T10800
Symbol
CALCOCO1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138292403 (CALCOCO1)
04131 Membrane trafficking [BR:
pwl04131
]
138292403 (CALCOCO1)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
138292403 (CALCOCO1)
Membrane trafficking [BR:
pwl04131
]
Autophagy
ER-phagy
ER-phagy recepters
138292403 (CALCOCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
Mod_r
APG6_N
ACBP4_C
HECW_N
LPP
Motif
Other DBs
NCBI-GeneID:
138292403
NCBI-ProteinID:
XP_069087086
LinkDB
All DBs
Position
4_2:complement(144026130..144197812)
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AA seq
710 aa
AA seq
DB search
MEESFVSADASDKALLGVVFLNVARTYIPNTKVECHYTLPPNISWSASDWIGIFKVDATS
VKDYTTFVWSSTHDGSGEGNSLHCSVQFQAYYLPKAGEQQYQFRYVDCHGIVCGQSTPFT
FGDLRPLDDLVTLEDDEASTDMLLVVPKATVLQHQLEESQQERNSLMRSKLQLEEEVGSL
KAKVEQLEEELKTSKEDYAKLMKKYQDLSESEAAVTEERDALGRQQVDHVARILELEEGI
QFVSEKVLGKEEELERMGVLIKTLQTEKEILNKRLQHEAGEKQQYQTALRTAELGRSEQD
LELQALKSHLEEKEAKTLQLHAEVGQLQQKLVLSQQKKLQVDSLCEQLRSTHDLLSANQQ
KVVLLGEELATASSIRDRTIADLHKSRLEAAETHTKLADMTLKWNEGRGQWWKERADLAL
SLEAEKEKVARLNIELLKLEKSIQDEKSQKHTLRAEQSRERDTNLVQLSEGKRELKELRS
ALKVMQMEKEQLREEKRELLEYVRKLEERLEKVADVKWSEVAATEEEEMASTEMTLSLTE
SPLPDSEDESPEDMRGHTKLSPYSLCDNRSPTKKLSSSREPVQEVVISQPAPISSQKKQV
PDDSSSDSEAEDEQAAMMSPARSRGEESSLLLPRLGSAFQDMARGSSSGQTWQRIMAASD
SVPVARLSSSTRRECPVCKERLSSDCSLAAFQEHVDSHFFYSAHDPFTFE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagctttgtgagcgcagatgcatcagacaaggccctgttaggggttgtgttc
ctgaatgtggctcgtacctatatccccaacactaaggtggagtgccactacactttgccc
cctaacattagctggtctgccagtgactggattggtatctttaaggtggacgcgacctct
gtgaaggactatactaccttcgtctggtcttcaacacatgatggcagtggcgaagggaac
tcacttcactgcagtgtccagtttcaagcatactatcttccaaaggccggtgagcagcag
tatcagttccgctatgtagactgccatgggatagtctgcggccagagcacacccttcacc
tttggtgacctaaggcccttggatgatctggtcacactagaagatgacgaggccagcaca
gacatgttgctggtggtgccaaaagccacagtactgcagcaccagttggaggaaagccag
caggagaggaactcgctcatgaggagcaagctgcagctagaggaggaggttggcagcctg
aaggccaaggtggagcagctggaggaggaacttaagacctcaaaggaggactatgctaaa
ctgatgaaaaagtaccaggacttgtctgaatccgaggcagcagtgacagaggagcgggat
gctctgggtcgccagcaggttgaccatgtggcgcggatcctggagctcgaggagggaatc
cagtttgtctctgagaaggtgctaggcaaggaggaggagttggaaaggatgggggtacta
ataaaaactctacagactgaaaaggaaatacttaacaagagactgcagcatgaggctggg
gagaagcagcagtaccagacagccttgcggactgcggaactgggacgaagtgagcaggat
ctagaattgcaggcccttaaatctcatctagaagagaaggaagctaaaacactgcaactc
catgctgaggtcggccagctgcagcagaagctggtgctgtctcagcaaaaaaagcttcag
gtagattcattgtgtgagcagctccgctccacccatgacctactctctgccaaccagcag
aaggtggtgctgctaggggaggagttggccaccgcctcatctattagagaccgcaccatc
gcagacctccacaagagccgactggaggccgctgaaactcacaccaagctagcagacatg
actctgaagtggaacgaggggagaggccagtggtggaaggaacgagcagacctagcgcta
agtctggaggctgagaaggaaaaggttgctcggctaaatattgaactcttgaagcttgaa
aaatctatccaggatgagaaatcccagaagcacacactgagagctgagcagtccagggaa
agagacaccaacctggttcagctctcggagggcaagagggaactgaaggaacttcgctca
gccctgaaagttatgcagatggagaaggagcagcttcgagaggagaagcgggagttgctg
gaatatgtgaggaagctggaggagagactggagaaagtggcagatgtgaagtggagtgag
gtggcagcaactgaagaggaggagatggcgagcacagaaatgaccctgagcttgacagaa
tctcccctccctgactctgaggatgagtccccagaagatatgcgagggcacaccaagctg
agcccctacagcttgtgtgataaccggtctcccaccaagaagctgtcaagctcgcgggaa
ccagtgcaggaggtggtcatcagccagcccgcccccatatcctctcagaagaaacaggtg
cctgatgacagcagttccgactctgaagccgaggatgaacaggcagccatgatgtcacca
gcgaggagcagaggggaagaatcgagtctcctcctgccgaggctgggaagtgcattccag
gacatggcgaggggcagctccagtggccagacgtggcagaggataatggcagcctctgac
agtgtcccggtggccaggcttagcagcagcacccggcgagagtgcccagtctgtaaagaa
cgtttgtcttcggactgcagcctagcagccttccaagagcatgtggacagccacttcttt
tacagtgcgcatgacccattcacctttgagtaa
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